mRNA_A-nodosum_M_contig1005.18.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A6A3JBF6_9STRA (Importin N-terminal domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JBF6_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.810e-39 Identity = 140/463 (30.24%), Postives = 223/463 (48.16%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLPR--WVSTKLGKALVDVAKVSWPRED---PDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRDTAAGVGEGASDAAVKAAREAVLGAARCLL-VIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQAT-VEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDDRGIYG 1404
E+ L P T + K QLE +L F+ A L L ++ + L+F TLE + +RW+ P E+L++R+F++ YL AS A + +V KL K L D+A+V W D PDF +++ L + E +R GL+LLS+V EEF R D+ + + +R+ K L +P VL +L V+ V + ++DA A ++ V A L +++WAP+ H++ LF + V +G +PA S AT + C+ E++SKR LP + D V+G L L T + + +L +++EF+ F+ +L R+ ++ + P L + AFT Q +G CL W FV VE+ EG+A DR R+ A + GL +V L+E+ + +NR +L+ELDDD G +G
Sbjct: 16 EVEGALCRLLDPATPAADKLQLEAQLTRFKETLAACLPVLFQLLQTSSSE-----YALWFAATTLEEYVAQRWAHFPVTEQLHLRQFVWDYLLASPAGGAQIAFVQRKLRKVLADIARVQWTVADARWPDFFVQVEALVADERSRERGLELLSVVVEEFGRDDALVLATVKRQAKNRLTAQLPGVLALLANVLKGCSH----VLQTSADAQAVADQDRVANVALTTLNSLITWAPVAEHVSDAWIALLFELARNWESVLAKGLTSPACVSS-----ATALQCLAELMSKRFLP-SRVDEVVGQVMFGLCPLLQKTVEQQLIGRATEQYLDKLSEFVELFLTQHLKRL-------------ENPKYGEILPT--FLQSVHAFTTKQPHVEGFLNCLSVWEVFVSYVEDVEQNEGAANDRVRAVLTAYEK--GLVAVMLHLVERVTYESNRNQLDELDDDAGTHG 446
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: H3GNB7_PHYRM (Importin N-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNB7_PHYRM) HSP 1 Score: 155 bits (393), Expect = 4.290e-37 Identity = 134/468 (28.63%), Postives = 224/468 (47.86%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLP----RWVSTKLGKALVDVAKVSWPRED-----PDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRDTAAGVGEGASDAAVKAAREAVLGAARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQAT-VEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDDRGIYGQG 1410
E+ L P+TS+ K QLE +L F+ P A L L +++ Q+ + L+F TLE + +W P E+L IR+F++ +L A+ A+ +V KL K L D+AK+ W + PDF+++++ L E +R GL+LLS+V +EF R D+ + + +R+ KA L +P++L +L V+ G + V+ R A + A L +V+WAP+ +H++ LF + +V G + + A+ + C+ E++ KR P +MV + + LL+ I + +L +++EF+ F+ +L R+ ++ R + P L + AFT Q +G CLR W FV +E+ EG+A +R R+ A + GL SV L+E+ + TNR +L+ELDDD QG
Sbjct: 10 EVEGALRRLLDPSTSAADKLQLEDQLTRFKETPAACLPVLFQLLSTS-----QNEYALWFAATTLEEYVANKWVHFPSAEQLQIRQFVWDFLLANSANHSGAQIAFVRRKLRKVLADIAKLQWQSDTTNAPWPDFLSQVEALVMDERSRESGLELLSVVVDEFGRDDALVLATIKRQAKARLAAQLPNLLALLANVLKGCSHLLL---TGEAHTVVEQDRVANV-ALTTLNSLVAWAPVADHMSEAWIDLLFELARNWERVFARGFTS-----HMCVSSASALQCLAELMGKRFAPARADEMVGHVMFALCPLLQKTVEDQLIGRA-TEQYLDKLSEFVELFLTQHLKRL-------------ENPRFENILPT--FLQAVHAFTTKQPHVEGFMNCLRVWEVFVTYIEEIEQNEGAANERVRAVLTAYEK--GLVSVMLHLVERVSYETNRNQLDELDDDNDAGTQG 445
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A3R7MLM3_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MLM3_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.100e-35 Identity = 132/488 (27.05%), Postives = 215/488 (44.06%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLPR---------WVSTKLGKALVDVAKVSWPRED-------------PDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRDTAAGVGEGASDAAVKAAREAVLGAARCLLV-------IVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQAT-VEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDDRGIYGQG 1410
E+ L P T +N K QLE +L F+ P A L L +G R + + L+F TLE + ++W P E+L++R+F++ YL A+ S +V KL K L D+A+V W D PDFM++++ L E TR GL+LLS+V EEF R D+ + + +R+ K L +PS+L +L ++ + E + ++ RC + +VSWAP+ H+ LF + V +G + S + + C+ E++SKR +P +MV G LS L T + + +L +++EF+ F+ +L ++ +E + L + AFT Q +G CL W FV +E+ EG+A +R R+ A + GL +V L+E+ + +N+ +LEEL DD G
Sbjct: 16 EVEAALCRLLDPATPANDKLQLEEQLTRFKETPAACLPVL--FQLLGTSRNE---YALWFAATTLEEYVAKKWPQFPASEQLHVRQFVWDYLLAAATSPDTGQTGGAQVAFVRRKLRKVLADIARVQWRTADVASPRPGAMGARWPDFMSQIEALVVEERTRESGLELLSVVVEEFGREDAMVLATIKRQAKGQLSAQLPSLLALLSNILHGCTHSLRSANE----------PQTIVNQDRCAHIALTTLNSLVSWAPVAEHVNEAWITLLFELARNWEHVFAKGFTSHMCLSS-----TSALQCLAELMSKRFVPARVDEMV-GQVLFGLSPLLQKTVEDQLISRATEQYLDKLSEFVEVFLTQHLRKL---------------ENPKYENILPTFLQSVLAFTTKQPHVEGFLNCLNVWDVFVSYIEEIEQNEGAANERVRAVLTAYEK--GLVAVMLHLVERVAYDSNQNQLEELGDDDDTAAHG 465
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A662WYF3_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYF3_9STRA) HSP 1 Score: 149 bits (377), Expect = 5.060e-35 Identity = 131/483 (27.12%), Postives = 217/483 (44.93%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLP---------RWVSTKLGKALVDVAKVSWPRED---------------PDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRDTAAGVGEGASDAAVKAAREAVLGAARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQAT-VEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDDRGIYGQG 1410
E+ L P T + K QLE++L F+ P A L L +G R + + L+F TLE + +W P E+L +R+F++ YL A+ S +V KL K L D+A+V W +D P+F+++++ L + R GL+L+S+V EEF R D+ + + +R+ KA L +PS+L +L ++ R + + G + A L +++WAP+ +T LF + V G + S AT + C+ E++SKR +P ++V + + LL+ I + +L +++EF+ F+ +L R+ +E + L + AFT Q +G CL W FV VE+ EG+A +R R A A + GL +V L+E+ + +NR +LEEL+DD + GQG
Sbjct: 16 EVEEALRRLLDPNTPATEKFQLEQQLTRFKEAPAACLPVL--FQLLGTSRNE---YALWFAATTLEEYVATKWPQFPAVEQLQVRQFVWDYLLAATTSSGGSPGAGGQIAFVRRKLRKVLADIARVQWRSDDAAGVASPRGGSGARWPEFLSQIEALVMEDRMRESGLELMSVVVEEFGRDDALVLASIKRQAKARLTAQLPSLLTLLSNIL---RGCSHNLQNGTELQVIVDQDRCAQIALTTLNNLITWAPVAEQMTEGWIALLFELSRNWEHVLARGFTSHMCLSS-----ATALQCLAELMSKRFVPSRIDEIVAQVLFSLCPLLQKTVEEQVIGRA-TEQYLDKLSEFVELFLTQHLKRL---------------ENPKYEQILPTFLQSVLAFTTKQPHVEGFLNCLSVWEVFVGYIEEVEQNEGAANERVRVALTAYEK--GLVAVMLHLVERVTYESNRNQLEELNDDDEVTGQG 467
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A6H5KLC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC9_9PHAE) HSP 1 Score: 138 bits (348), Expect = 5.920e-35 Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 1 Query: 1078 SSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQATVEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDD 1389
SSG GG + YP+ ELL+LLAAFTFAQ +AQGLQRCLRAWSAFV QAT+E+GEGSA D +SA LARDNA GLQSVCQALLEK+LFITN LE+LDDD
Sbjct: 10 SSGSGGPSEP-----YPVTELLTLLAAFTFAQPSAQGLQRCLRAWSAFVAQATLEKGEGSAGDVEKSAALARDNAGGLQSVCQALLEKTLFITNGEALEDLDDD 108
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A2P4YSN3_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YSN3_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.260e-35 Identity = 135/468 (28.85%), Postives = 214/468 (45.73%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHAS---LPRWVSTKLGKALVDVAKVSWPRED------------PDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRDTAA-----GVGEGASDAAVKAAREAVLGAARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQAT-VEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEE 1377
E+ L P+T N K QLE +L F+ P A L L +++ Q+ + L+F TLE + ++W P E+L IR+F++ YL AS AS +V KL K L D+AKV W E+ PDFM++++ L E TR GL+LLS+V EEF R D+ + + +R+ K L+ +PSVL +L ++ G+GE A V A L ++SWAP+ H+ LF + V G + + AT + C+ E+++KR P + D ++G L L T + + +L +++EF+ F+ +L R+ ++ + P L + AFT Q +G CLR W FV VE+ EG+A +R R+ A + GL +V L+E+ + +N +L+E
Sbjct: 4 EVEGALRRLLDPSTPPNDKLQLEEQLTRFKETPAACLPVLFQLLSTS-----QNEYALWFAATTLEEYVAKKWVHFPISEQLQIRQFVWDYLLASAASGGAQIAFVRRKLRKVLADIAKVQWRGEETASPRPGPDARWPDFMSQVEALVVEERTRESGLELLSVVVEEFGRDDAMVLATVKRQAKTRLIAQLPSVLALLANILKGCSHVLQVGELQGIGEQDRVANV---------ALTTLNSLISWAPVAEHVNEAWINLLFEMARNWENVFARGFTS-----HMCVSSATALQCLAELMNKRF-EPARVDEIVGQVMFGLCPLLQKTVEDQLISRATELYLDKLSEFVEMFLTQHLKRL-------------ENPKYGDILPT--FLQSVHAFTTKQPHIEGFMNCLRVWEVFVSYVEEVEQNEGAANERVRAVLTAYEK--GLVAVMLHLVERVKYESNGNQLDE 434
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: UPI0014255611 (LOW QUALITY PROTEIN: exportin-6-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255611) HSP 1 Score: 147 bits (371), Expect = 3.040e-34 Identity = 131/523 (25.05%), Postives = 218/523 (41.68%), Query Frame = 1 Query: 22 AETTMELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLPRWVSTKLGKALVDVAKVSWPREDPDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASRD-------TAA---GVGEGASDAAVKAAREAVLG-----------------------------------------AARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGG-EGGRNP---------AGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRP------GLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQATVEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDD 1389
AE+ + L ++ EF+ PTT++ RK+++E L+ F + + Q+ +V+ + E I R+W I E+++ IR L ++L + H ++P + KL K +V +A++ WP PDF + + QL + T +LGL LL SEE L + R+ EL L IP+VL ++ ++ + D TA G D+ G A CL + SW PL+ H+T L ++F + + G +P +GS SL G + C+ E++SK +P + ++ +L M LL+ +T T + L++ ++ + EFL F+ +L R G +PI E LSLL +TF Q + +G CL W+ F+ S A + + + L+S+ +ALL K F N+ +LEELDD+
Sbjct: 5 AESLLALEGLMNEFFAPTTTNQRKREIEELLNNFSAQTGSWRHCFYFLT------HSQNEYVMMYALSVFETVINRQWIGIVGEDKIQIRNGLSKFLLSHHKAVPSSIRNKLIKVIVCIARLDWPHFYPDFFSNILQLIQQSQTASLGLMLLHTTSEELAAPREDLSASRKEELNRLLQDQIPTVLNIITHILESILDKHRQLVITATPPPSPTHGDDDSQDAFTNNIAYGTSPLQSGSSLIRNIFNSPQTSKQNLQPLPPLDQDSEHLSNLALHCLAHLFSWIPLSCHITTRLLTTIFHFANFGCDIESVQSGTSPYHLNDSFSSSGSSSL---GVLAMCCINEIMSKNCIPADFEEFLLKMFQQSFHLLQRMTKDNTAQSVGNKIQELDESYVEKFTEFLRLFVSIHLRRFEGNS----------------HFPILEFLSLLYKYTFKQASNEGFFACLDIWNVFLDYLITR----SRAREPEANQVVNSYSEALESLMEALLFKMQFRCNQVQLEELDDE 498
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: D7FPD5_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD5_ECTSI) HSP 1 Score: 133 bits (334), Expect = 6.640e-34 Identity = 60/90 (66.67%), Postives = 78/90 (86.67%), Query Frame = 1 Query: 37 ELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQ 306
+LGP L+EFY PTTS+ RKQQLE+ LHAF+ PNAHLTSL+I+ ++G+RREQ++LFVLYFCG T+E I +RW++IPKEERL++RK LFQ
Sbjct: 3 QLGPALSEFYAPTTSNERKQQLEQGLHAFQAQPNAHLTSLDILASIGQRREQENLFVLYFCGTTIEGGIPKRWNAIPKEERLHVRKTLFQ 92
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: UPI000719E1CE (exportin-6-like isoform X1 n=3 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E1CE) HSP 1 Score: 140 bits (352), Expect = 8.550e-32 Identity = 122/514 (23.74%), Postives = 214/514 (41.63%), Query Frame = 1 Query: 25 ETTMELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLPRWVSTKLGKALVDVAKVSWPREDPDFMTELQQLASRESTRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAA----------------------SRDTAAGVGEG---ASDAAVKA------------------AREAVLGAARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQEC-----GATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTS------GGTIRPGLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQATVEEGEGSA-----ADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDDD 1389
E+ L ++ EF++PTT++ +K+Q+E L+ F + L + +V+ FC +E I R+W S E++ +R L +++ + H +P ++ KL K +VD+ ++ WP PDF T + QL + T LGL L+ SEE + L R+ EL+ L+ + +L L ++ + SRD+ + + D K ++ + CL + SW PL+ +T +L ++F + P+L C G + C+ E+++K +P + ++ +L M LL+ +T G++ LN++++ + +FL F+ +L R + +P+ E L+LL +TF Q T +G CL WS F+ V S DR + A L S+ LL K F N+++LEELDD+
Sbjct: 6 ESLRSLEALMEEFFSPTTTNEKKRQIEELLNNFSQQRGSWKHCLYFLTNTSNE------YVMMFCLTVIENIINRQWISFAGPEKMELRGSLSKFMLSHHDHVPSFIRNKLVKLVVDIGRLDWPHFYPDFFTSIMQLVQQPQTMVLGLILIKTTSEEMISPREDLSVSRKEELRKLLLDQMAIILGNLTVILESTLEKHRHLATXXXXXXXXRDSDSRDSLSMFSTSPLHSDDVLSKMFKSLHKDNLESLPPLDADSQSVCMLVLECLSHLFSWIPLSAMITSNLLAAIFHFASFGCE------------PNLSSCKGTELGVLAMTCINEIMAKNCVPADFEEFLLQMFQQTFQLLQRLTRENTSNVSGSMLTELNENYIEKFTDFLHLFVSIHLRRF----------------ESNNRFPVLEFLALLFKYTFKQPTNEGFYNCLEIWSVFLDYLDVLVRNRSVDKLNLLDRYKEA---------LASLVTQLLRKLQFRYNQSQLEELDDE 476
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Match: A0A6F9DWH0_9ASCI (Exportin-6 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DWH0_9ASCI) HSP 1 Score: 136 bits (342), Expect = 1.650e-30 Identity = 121/491 (24.64%), Postives = 214/491 (43.58%), Query Frame = 1 Query: 40 LGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTSLEIIVAMGERREQQDLFVLYFCGCTLEAAIRRRWSSIPKEERLNIRKFLFQYLAASHASLPRWVSTKLGKALVDVAKVSWPREDPDFMTELQQLASRES-----TRALGLDLLSLVSEEFVRLDSPLPSGRRRELKAALVWVIPSVLQVLGEVVAASR---------------------------DTAAGVGEGASDAAVKAAREA-------VLGAARCLLVIVSWAPLTNHLTIDLFRSLFGIVEAAAQVGGEGGRNPAGSPSLQECGATCVACVTEVVSKRLLPPEQQDMVLGMADHMLSLLKIVTSGGTIRP---GLNDDFLMQMAEFLGAFMEANLGRVLGMGGVSSGGGGVDDARKPHEYPIGELLSLLAAFTFAQRTAQGLQRCLRAWSAFVVQATVEEGEGSAADRARSATLARDNAAGLQSVCQALLEKSLFITNRTELEELDD 1386
L ++TEF+ P+TS+ RK+++E +L F A L I + ++ +V+ +C LE + + W + IR+ L ++ +P+++S KL K +VD+ +V WP P+F T L +LA + TR LGL L + SEE + + R+ ELK L+ +PS+L+V +V+ A D +G + + V E + A CL + SW PLT ++ DL +F + + G +N + L + G+ + C+ E+++K +P +D ++ + LL+ +T G R GL+D +L + EFL F+ + R+ D +P+ L+LL FTF Q + + C+ W ++ +++ E D+ + T ++ G+ A L+ F N++ LEELD+
Sbjct: 9 LERVMTEFFHPSTSNQRKREIEEQLTKFGNQNGAWKNCLHIFT------KTRNEYVMMYCLSVLENLVNKMWVGFDPGAKSEIRQSL-NHILLHRKDVPQFISNKLIKVIVDIGRVDWPMFYPNFFTGLLELAGSSNGEFGDTRTLGLIALRIASEELAAPREDVSAQRKEELKKLLLAQVPSMLKVTLDVLHAEWMHHFMQLTEVSMTTPPPSPSSGESNLFDLFSGTTQDGTLPRVTNTFEISPHSVTIITHALECLCHLFSWIPLTVNINNDLLSQIFRYARLGSCLSGHKSQNLS---VLSDLGSHAMGCINELLAKNFVPHNFEDFLVRIFRQTFHLLQQLTKGDNTRECLEGLDDSYLEKFIEFLRLFVTMHFSRI--------------DMNA--SFPLMPFLTLLFKFTFNQSSHEHFLNCMDIWEV-LIDYIIDKAEQQKDDKKSTLTRYKE---GMLQFATATLQHIQFRLNQSYLEELDN 469 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1005.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1005.18.1 >prot_A-nodosum_M_contig1005.18.1 ID=prot_A-nodosum_M_contig1005.18.1|Name=mRNA_A-nodosum_M_contig1005.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=471bp CTRTRTPAETTMELGPILTEFYTPTTSSNRKQQLERELHAFRTLPNAHLTback to top mRNA from alignment at A-nodosum_M_contig1005:125165..135001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1005.18.1 ID=mRNA_A-nodosum_M_contig1005.18.1|Name=mRNA_A-nodosum_M_contig1005.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9837bp|location=Sequence derived from alignment at A-nodosum_M_contig1005:125165..135001+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1005:125165..135001+ >mRNA_A-nodosum_M_contig1005.18.1 ID=mRNA_A-nodosum_M_contig1005.18.1|Name=mRNA_A-nodosum_M_contig1005.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1413bp|location=Sequence derived from alignment at A-nodosum_M_contig1005:125165..135001+ (Ascophyllum nodosum dioecious)back to top |