Homology
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
D7FSB5_ECTSI (Dice1/dead/H box polypeptide, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB5_ECTSI)
HSP 1 Score: 549 bits (1415), Expect = 2.160e-171
Identity = 357/712 (50.14%), Postives = 440/712 (61.80%), Query Frame = 2
Query: 23 EIQASLKSMCEETGGCLISWDGEDTSKHKTLSSRVNDLMAYVHKKS---------------------------PVVMFRTEDSLHGGPADGDDLXXXXXXXXXTSPQLAEMKKPPAARAGIMLRGGS--GIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSA------------------------EMLEQLGVTADNYELEWCGDGSRLDVPRAVTWPLFVKESG--PTPGAGKP--FGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQPFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLAARHVERADRIERAGRAQDPEHRQQHQDSAGSAVGAGFGNSKSSYANAFQVPVGELLSQWETMRAQLFGAGGATVKGLFAGAP------GPSRRSLAPS--AHGPRFSIKADAADGDG------DDDEGNRRGRSTAEGSSTGM------AGLRSPVLWCVAQSLAPARSTQEMSNFMSRMRNVEFPRDPLSDPGPDENMPQ-GGFQRLMASTTFESPFAKKK---LGLN--PLGLDEAANESAILDEDVELGDDGHKKNGDREAAGDSASSDGASGESXXXNAASPGEIAXXXXXXXXXXXXXXXPGQSSSVSNQGRGQGTNGE--IRRGSSFTRRQLPKLIANRGRRRMRPD 1903
E +L+S+CEETGGCL +WD ED KHKTL+S VNDL+ VHKKS PVVMFR +DSL GG D+ + +PP ARAG+ +R G+ WPIPEPFWVDR+VD LPPR EAQPE+ FRK + +A ++LE+LGV D YELEWCG G+RLD+PR+ TW LFVK++ P+P + P FG+LR S T+G+ +M++LPYN+E LIPLL+ RAST+QAT+S PPA GSPWARDF+AY+KGVPTYYLP+LQRVLQPFGV +LIPGE LQ+G GV HRK+ E+LN+LK+LA R VERADRIERAGRA+DP+ RQQ Q G + GA + + Y+NAFQVPVGELLSQWE MR QLFG GGATV GLF+ P P R +++PS +H +A G G D E +R+ A LRSPVL VA+SLAPARST EMS+FM++M+ VEFPRDP+ +PGPDE+M Q GGFQRLMA+TTFESPFAKKK LG++ PL LDEAANESA+LD + E + D+ AAG + A +A+P XXXXXXXXXXXXXXX ++R SSFTR+ LPKL+A RGR +M D
Sbjct: 237 ETVMALRSVCEETGGCLATWDAEDGPKHKTLASHVNDLLGNVHKKSVXXXXXXXXXXXXXXXXXXXXXRASQGPVVMFRADDSLGGGGGHADEYDDDLDGGFNA------IHRPPVARAGLSMRSGATCSFWPIPEPFWVDRTVDPLPPRREAQPELVFRKTGLAAGAAAGTATTSPRGDLTHPRERRFGESGRIPDKLLEKLGVGVDQYELEWCGSGTRLDIPRSETWQLFVKDTSQPPSPDSTPPPAFGHLRASLTTGRPLMMVLPYNYEVLIPLLQARASTLQATQSTAPPAAGSPWARDFMAYIKGVPTYYLPSLQRVLQPFGVQALIPGEGLQSGGGVLHRKVTEKLNSLKELAGRQVERADRIERAGRAKDPDQRQQQQQDNGQSAGALSSSKSALYSNAFQVPVGELLSQWEIMRTQLFGTGGATVSGLFSAGPVGQRRLSPPRPTISPSDSSHNAVGDGATTSAVGRGGNQPLLDRRESSRKXXXXXXXXXXXXXXXXXKAVLRSPVLASVAESLAPARSTHEMSDFMTKMKGVEFPRDPMREPGPDEHMRQAGGFQRLMAATTFESPFAKKKKKKLGIDYSPLELDEAANESAVLDMEDEEDEAAANAKNDKNAAGTKVGDNQAPDSPVPGASAAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRMSSFTRKMLPKLVATRGRHKMGRD 942
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A6H5KA48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA48_9PHAE)
HSP 1 Score: 283 bits (724), Expect = 7.250e-82
Identity = 157/324 (48.46%), Postives = 195/324 (60.19%), Query Frame = 2
Query: 23 EIQASLKSMCEETGGCLISWDGEDTSKHKTLSSRVNDLMAYVHKKSPVVMFRTEDSLHGGPADGDDLXXXXXXXXXTSPQLAEMKKPPAARAGIMLRGGS--GIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKP-------------------------DPGVTDSGS--------------------------SAEMLEQLGVTADNYELEWCGDGSRLDVPRAVTWPLFVKESG--PTPGAGKP--FGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQ 823
E +L+S+CEETGGCL +WD ED KHKTL+S VNDL+ VHKK PVVMFR +DSL GG D+ + +PP ARAG+ +R G+ WPIPEPFWVDR+VD LPPR EAQPE+ FRK D V DS + + +LE+LGV D YELEWCG G+RLD+PR+ TW LFVK++ P+P + P FGYLR S T+G+ +M++LPYN+E LIPLL+ + QAT+S PPA GSPWARDF+AY+KGVPTYYLP+LQRVLQ
Sbjct: 81 ETVMALRSVCEETGGCLATWDAEDGPKHKTLASHVNDLLGNVHKKGPVVMFRADDSLGGGGGLADEYDDDLDGGFNA------IHRPPVARAGLSMRSGATCSFWPIPEPFWVDRTVDPLPPRREAQPELVFRKTGSAAAAAAGTATTSLRGDLTHPRENDGLVQDSSNDDVPRTDRTIPGFAASVWSERLIPDKATVLLEKLGVGVDQYELEWCGSGTRLDIPRSETWQLFVKDTSQPPSPDSTPPPAFGYLRASLTTGRPLMMVLPYNYEVLIPLLQ---AVQQATQSTAPPAAGSPWARDFMAYIKGVPTYYLPSLQRVLQ 395
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A6H5K9W2_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W2_9PHAE)
HSP 1 Score: 156 bits (395), Expect = 3.620e-35
Identity = 140/302 (46.36%), Postives = 173/302 (57.28%), Query Frame = 2
Query: 1112 MRAQLFGAGGATVKGLFAGAPGPSRRSLAP-----------SAHGPRFSIKADAADGDG---DDDEGNRRGRSTAEGSSTGMAG------LRSPVLWCVAQSLAPARSTQEMSNFMSRMRNVEFPRDPLSDPGPDENMPQ-GGFQRLMASTTFESPFAKK---KLGLN--PLGLDEAANESAILDEDVELGDDGHKKNGDREAAGDSASSDGASGESXXXNAASPGEIAXXXXXXXXXXXXXXXPGQSSSVSNQGRGQGTNGE------------IRRGSSFTRRQLPKLIANRGRRRMRPD 1903
MR QLFG GGATV GLF+ P RR +P +A G + A D + D E +RR A+G+ +G G LRSPVL VA+SLAPARST EMS+FM++M+ VEFPRDP+ +PGPDE+M Q GGFQRLMA+TTFESPFAKK KLG++ PL LDEAANESA+LD + E + D+ AAG G++ + +PG AXXXXXXXXXXXXXXX ++R SSFTR+ LPKL+A RGR +M D
Sbjct: 1 MRTQLFGTGGATVSGLFSAGPVGQRRLSSPRPTISPSDYSQNAVGDGATTSAVGRDSNQPPLDRRESSRRPEEIAKGAVSGFGGEWGKAVLRSPVLASVAESLAPARSTHEMSDFMTKMKGVEFPRDPMREPGPDEHMRQAGGFQRLMAATTFESPFAKKNKKKLGIDYSPLELDEAANESAVLDMEDEEDEAAANAKNDKNAAGTKV------GDNQAPDNPAPGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRMSSFTRKMLPKLVATRGRHKMGRD 296
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A4D9CVW8_9STRA (WW domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVW8_9STRA)
HSP 1 Score: 126 bits (317), Expect = 1.050e-25
Identity = 119/456 (26.10%), Postives = 191/456 (41.89%), Query Frame = 2
Query: 287 AARAGIMLRGGSG--IWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSG-SSAEMLEQLGVTADNYELEWCGDGSR-------LDVPRAVTWPLFVKESGPTPGA-GKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQPFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLAARHVERADRIERAGRAQDPEHRQQHQDSAGSAVGAGFGNSKSS-------------------------YANAFQVPVGELLSQWETMRAQLFGAGGATVKGLFAGAPGPSRRSLAPSAHGPRFSIKADAADGDGDDDEGNRRGRSTAEGS-STGMAGLRSPVLWCVAQSLA----PARSTQEMSNFMSRMRNVEFPRDPLSDPGPDENMPQGGFQRLMASTTFESPFAKKK 1531
A RA + L S WPIPE FWVDR+++ LP R +A P + + + TD+ +S LE G+T D Y LEWCG G+ L + R + WP+++ S G+ G PFG+L S +G++ +VLLPY++ +L+ L+++ A S ++ W +F ++L P YY AL+R L+ G+ + +P + G + +++RL +++ A RAD ++ H + + S GA G + P LLS WE +R LFG G + GL+ RG + +G+ G R P W + Q + P EM + R+ +E RDPL + PD++ + QR +A F +PF + +
Sbjct: 351 AVRAILCLNHESAGFSWPIPEAFWVDRTLEHLPKR-DAHPILLYSRLATDSTDAALASLTRLEAQGLTMDRYPLEWCGGGAGAAPSGGGLRMTRGMRWPVYLMGSARMKGSRGCPFGFLEASDVAGRVTLVLLPYDYPKLVELVQVAVEGGSA--SGHLTSLPVKWRPEFNSFLAQTPPYYFSALRRCLKKVGLHTQVPEQK----TGGLSQLVIKRLQRIREQA-----RADNQRYEMSRREHPHNRGLEFSGDVGTGASGGEGLEGGXXXXXXXXXXXXXXXXXXXXXXXXHDERLFDPSKSLLSMWEGLRQGLFGEGDHVISGLYV-------------------------------------RGFQSWQGACGQPKNGRRRPEEWMLLQEVGALQMPEIPINEMGAYSERLLQMEVFRDPLDEYDPDDDTLEAWKQRKLA-VNFGNPFRRPR 756
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A835YW26_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW26_9STRA)
HSP 1 Score: 115 bits (288), Expect = 3.400e-22
Identity = 132/473 (27.91%), Postives = 188/473 (39.75%), Query Frame = 2
Query: 293 RAGIMLRGGSGIWPIPEPF-----WVDRSVDVLPPRPEAQPEIWFRKPDPGVTD-SGSSAEMLEQLGVTADNYEL-----------EWCGDG----------SRLD------VPRAVTWPLFVKE-----------SGPTPGAGKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLR-----LRASTVQATKSPQPPAVGSP----------WARDFVAYLKGVPTYYLPALQRVLQPFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLAARHVERADRIERAGRAQD-PEHRQQHQDSAGSAVGAGFGNSKSSYANAFQVPVGELLSQWETMRAQLFGAG-GATVKGLFAGAPGPSRRSLAPSAHGPRFSIKADAADGDGDDDEGNRRGRSTAEGSSTGMAGLRSPVLWC-VAQSLAPARSTQEMSNFMSRMRNVEFPRDP--LSDPGPDENMPQGGFQRLMASTTFESPF 1519
R + +R G+ WP+PE VDR+ D LPP QPE++++ P +D + +A +LG+ D YE+ EWC SR +P+ WPLF + G P P+ +L+ + G+ + +LPYNF L+ LL L + QA + P A G W DF YL VP YY AL+R L+P G+ L+ + ++ + +++ LN+LKD +E R P H A + AG VP G+LL +E MR LFG G G TV GLF S H R RG S + L V+QSLAPARS +MSN+++ + + E RDP +D + PQ QR +A F +PF
Sbjct: 351 RGILTMRRGTASWPLPEAGVAIEGLVDRARDDLPPLRTGQPEVFYKVPADASSDPTVKAAAAAARLGIAMDEYEMDLSRHCRKYKVEWCAGNAPSAATAFYSSRATTVTPARMPKDAKWPLFARAVPSPLQLAGSAGGAVPPTFVPWAFLQGHRLVGRGTLTVLPYNFPWLVHLLLQIEQLLILNASQAAAAALPGAAGDKTNTVASLTPEWRNDFKTYLTAVPLYYHAALKRALKPMGLHLLVQDQAIERPLP---QRVHAHLNSLKDAVRAELESVHASTAPLRTTSTPATHGSHGSRAQQDLEAGL-------EALLCVPPGQLLEHFERMRRGLFGGGMGVTVTGLF-------------STHAARAP-----------------RGASQSXXXXXXXXXXXXXXLLAEVSQSLAPARSVHDMSNYIALLLSREPLRDPDVRNDDYREAATPQEVMQRKVA-VDFGNPF 782
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A8B8PZG1_9MYRT (integrator complex subunit 6-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8PZG1_9MYRT)
HSP 1 Score: 91.3 bits (225), Expect = 6.830e-15
Identity = 66/206 (32.04%), Postives = 101/206 (49.03%), Query Frame = 2
Query: 323 GIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSAEMLEQLGVTADNYELEWCGDGSRLDVPRA---VTWPLFVKESGPTPGA-GKPFGYLRFSQTSGKIVMVLLPYNFEELIPLL-RLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQPFGVLSLIPGENLQAGVGVH--HRKMVERLNNLK 919
G WPIPE +W+D+++ LPPR A P + F + + + M++ L D YELE ++ + R V W +F+ SG PG G PFGYL+ + + ++++PYN+ L+PL+ + +QA K P+ W F YLK +P YY L+R L G S I EN++ + H K+ N K
Sbjct: 287 GHWPIPEAYWLDQNLTALPPR-TAHPIVKF-------SCAPTEPHMMDVLPF--DKYELE-SSPLTQYILSRKQPHVAWQVFIANSGKHPGELGAPFGYLKAATNLNCVNLLVMPYNYPVLLPLMDEMLKKPLQAGKPPRE------WKPAFDEYLKTMPAYYSIPLKRALARMGAQSTIVPENMEGSSFSYAVHSKLKNHKNEAK 475
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
UPI001D0832F9 (integrator complex subunit 6 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0832F9)
HSP 1 Score: 87.8 bits (216), Expect = 9.220e-14
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 2
Query: 281 PPAARAGIMLRGGSGIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSAEMLEQLGVTADNYELEWCGDGSRLDVPRAVT--WPLFVKESGPTPGAGKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQPFG 832
P +A+ G + G WPIPE FW D ++ VLPPR A P + F T + ++E L D YELE + + T W +FV S + G PFGYL+ S + + ++PYN+ L+PLL ++ ++P+ W + F Y++ +P+YY L+R L G
Sbjct: 316 PRSAQKGFAV----GFWPIPESFWPDINISVLPPR-SAHPNVKF-------TCTNQDPMVIENLPF--DKYELEPSPLTQYILARKQPTICWKVFVPNSYKSSEVGHPFGYLKASTNLSCVNLFVMPYNYPVLLPLLDELFKVLRLKQTPE-------WTQQFRNYMRTMPSYYAGPLRRALTRMG 480
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A1B0D173_PHLPP (VWFA domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D173_PHLPP)
HSP 1 Score: 85.9 bits (211), Expect = 3.510e-13
Identity = 83/303 (27.39%), Postives = 130/303 (42.90%), Query Frame = 2
Query: 38 LKSMCEETGGCLISWDGEDTSKHKTLSSRVNDLMAYVHKKSPVVMFRTEDSLHGGPADGDDLXXXXXXXXXTSPQLAEMKKPPAARAGIMLRGGSGIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSAEMLEQLGVTADNYELEWCGDGSRLDVPRAVT--WPLFVKESGPTPGAGKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQ----PFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLA 928
++ MCE TGG H L+ + L V K P V+ + DG+ T+ ++ ++K P+ + + G WPIPEP+W D LPPR +A P+I VT +M+ + D YELE ++ R T W + V + PFGYL+ + T ++ +++LPYN+ L+PLL + + PP + W F Y++ +P YY P L+R L P+ +L I ENL + + + L NLK+ A
Sbjct: 198 IEKMCEVTGGRSYR-----VKSHYVLNQCIESL---VQKVQPGVVVHFDQLAPKDLKDGE----VQDIAFQTTKKMIYVQKHPSQKTYPV-----GYWPIPEPYWPDPKALSLPPR-DAHPKIRI------VTPCIDEPQMVRNFPI--DKYELEASPLTLQILSKRETTKCWSVIVSGMH---SSDAPFGYLKANATFTQVYLMVLPYNYPVLLPLL----GDLFHKYNSNPP---NDWIYKFSNYVRNIPQYYCPFLRRALGSASVPYQLLQYIIPENLDSYLSP---AVANYLKNLKNTA 461
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A1B0CHR3_LUTLO (VWFA domain-containing protein n=4 Tax=Phlebotominae TaxID=7198 RepID=A0A1B0CHR3_LUTLO)
HSP 1 Score: 85.5 bits (210), Expect = 4.590e-13
Identity = 82/301 (27.24%), Postives = 130/301 (43.19%), Query Frame = 2
Query: 38 LKSMCEETGGCLISWDGEDTSKHKTLSSRVNDLMAYVHKKSPVVMFRTEDSLHGGPADGDDLXXXXXXXXXTSPQLAEMKKPPAARAGIMLRGGSGIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSAEMLEQLGVTADNYELEWCGDGSRLDVPRAVTWPLFVKESGPTPGAGKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQ----PFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLA 928
++ MCE TGG H L+ + L V K P V+ + DG+ T+ ++ ++K P+ + + G WPIPEP+W D LPPR +A P+I VT +M+ + D YELE ++ R + V SG + PFGY++ + T ++ +++LPYN+ L+PLL + + PP + W F Y++ +P YY P L+R L P+ +L I ENL + + + L NLK+ A
Sbjct: 198 IEKMCEVTGGRSYR-----VKSHYVLNQCIESL---VQKVQPGVVVHFDQLAPKDLKDGE----VQDIAFQTTKKMIYVQKHPSQKTYPV-----GYWPIPEPYWPDPKAPSLPPR-DAHPKIRI------VTPCIDEPQMVRNFPI--DKYELEASPLTLQILSKREASKCWSVVVSG-MHNSDAPFGYIKANATFTQVYLMVLPYNYPVLLPLL----GDLFHKHNSSPP---NDWIYKFSNYVRNIPQYYCPFLRRALGSASVPYQLLQYIIPENLDSYLSP---TVANYLKNLKNTA 461
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Match:
A0A1S3IRE4_LINUN (integrator complex subunit 6 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IRE4_LINUN)
HSP 1 Score: 83.6 bits (205), Expect = 1.740e-12
Identity = 68/222 (30.63%), Postives = 99/222 (44.59%), Query Frame = 2
Query: 287 AARAGIMLRGGSGIWPIPEPFWVDRSVDVLPPRPEAQPEIWFRKPDPGVTDSGSSAEMLEQLGVTADNYELEWCGDGSRLDVPRA--VTWPLFVKESGPTPGAGKPFGYLRFSQTSGKIVMVLLPYNFEELIPLLRLRASTVQATKSPQPPAVGSPWARDFVAYLKGVPTYYLPALQRVLQPFGVLSLIPGENLQAGVGVHHRKMVERLNNLKDLAARHVER 946
+A+ G M+ G WPIPE FW D + L PR A P + F S + + + D YELE + R W +FV S G PFGYL+ S + ++++PYN+ L+PLL V K Q W + F YLK +P YY L+R L GV +L+P EN++ + ++ L LK+ A + +R
Sbjct: 305 SAQKGYMI----GHWPIPENFWPDLNSPTLTPR-SAHPNVKF---------SCTPCDPMAVENFPFDKYELEPSPLTQYILERRQPNACWQVFVSNSAKYSDIGHPFGYLKPSSNLTMVNLIVMPYNYPVLLPLLE-DLFKVHKLKPNQR------WRQQFDNYLKTMPVYYAGPLRRALSRMGVPNLVP-ENMENCLSY---SVISYLKKLKNQAKQDYDR 501
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig100.56.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 22
0 1 Expect = 2.16e-171 / Id = 50.14 Expect = 7.25e-82 / Id = 48.46 Expect = 3.62e-35 / Id = 46.36 Expect = 1.05e-25 / Id = 26.10 Expect = 3.40e-22 / Id = 27.91 Expect = 6.83e-15 / Id = 32.04 Expect = 9.22e-14 / Id = 31.18 Expect = 3.51e-13 / Id = 27.39 Expect = 4.59e-13 / Id = 27.24 Expect = 1.74e-12 / Id = 30.63 Sequence D7FSB5_ECTSI A0A6H5KA48_9PHAE A0A6H5K9W2_9PHAE A0A4D9CVW8_9STRA A0A835YW26_9STRA A0A8B8PZG1_9MYRT UPI001D0832F9 A0A1B0D173_PHLPP A0A1B0CHR3_LUTLO A0A1S3IRE4_LINUN Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7FSB5 Preferred name INTS6 PFAMs INT_SG_DDX_CT_C,VWA_2 Model size 3509 Max annot lvl 2759|Eukaryota KEGG ko ko:K13143,ko:K13180 Hectar predicted targeting category other localisation GOs GO:0000428,GO:0003674,GO:0004888,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005856,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009301,GO:0009987,GO:0010467,GO:0015629,GO:0016070,GO:0016073,GO:0016180,GO:0016591,GO:0018130,GO:0019438,GO:0023052,GO:0030880,GO:0031123,GO:0031974,GO:0031981,GO:0032039,GO:0032774,GO:0032991,GO:0034470,GO:0034472,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0038023,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060089,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 Exons 15 Evalue 4.38e-172 EggNOG OGs KOG3768@1|root,KOG3768@2759|Eukaryota Description snRNA processing Cds size 3009 COG category S BRITE ko00000,ko01000,ko03041
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866357.8877509-UTR-A-nodosum_M_contig100:651221..651675 1680866357.8877509-UTR-A-nodosum_M_contig100:651221..651675 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig100 651222..651675 - 1680866358.1402476-UTR-A-nodosum_M_contig100:663038..663041 1680866358.1402476-UTR-A-nodosum_M_contig100:663038..663041 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig100 663039..663041 - 1680866358.1491623-UTR-A-nodosum_M_contig100:663418..663461 1680866358.1491623-UTR-A-nodosum_M_contig100:663418..663461 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig100 663419..663461 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866357.9008324-CDS-A-nodosum_M_contig100:651675..651855 1680866357.9008324-CDS-A-nodosum_M_contig100:651675..651855 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 651676..651855 - 1680866357.913483-CDS-A-nodosum_M_contig100:652292..652412 1680866357.913483-CDS-A-nodosum_M_contig100:652292..652412 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 652293..652412 - 1680866357.9249544-CDS-A-nodosum_M_contig100:652954..654070 1680866357.9249544-CDS-A-nodosum_M_contig100:652954..654070 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 652955..654070 - 1680866357.9332142-CDS-A-nodosum_M_contig100:655220..655298 1680866357.9332142-CDS-A-nodosum_M_contig100:655220..655298 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 655221..655298 - 1680866357.9449098-CDS-A-nodosum_M_contig100:655612..655760 1680866357.9449098-CDS-A-nodosum_M_contig100:655612..655760 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 655613..655760 - 1680866357.9566457-CDS-A-nodosum_M_contig100:655965..656293 1680866357.9566457-CDS-A-nodosum_M_contig100:655965..656293 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 655966..656293 - 1680866357.9661543-CDS-A-nodosum_M_contig100:656836..656942 1680866357.9661543-CDS-A-nodosum_M_contig100:656836..656942 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 656837..656942 - 1680866357.9783876-CDS-A-nodosum_M_contig100:657472..657628 1680866357.9783876-CDS-A-nodosum_M_contig100:657472..657628 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 657473..657628 - 1680866357.9909005-CDS-A-nodosum_M_contig100:658353..658485 1680866357.9909005-CDS-A-nodosum_M_contig100:658353..658485 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 658354..658485 - 1680866358.0449228-CDS-A-nodosum_M_contig100:659255..659334 1680866358.0449228-CDS-A-nodosum_M_contig100:659255..659334 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 659256..659334 - 1680866358.0999897-CDS-A-nodosum_M_contig100:659619..659774 1680866358.0999897-CDS-A-nodosum_M_contig100:659619..659774 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 659620..659774 - 1680866358.110287-CDS-A-nodosum_M_contig100:660306..660451 1680866358.110287-CDS-A-nodosum_M_contig100:660306..660451 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 660307..660451 - 1680866358.1207478-CDS-A-nodosum_M_contig100:661879..662034 1680866358.1207478-CDS-A-nodosum_M_contig100:661879..662034 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 661880..662034 - 1680866358.1314864-CDS-A-nodosum_M_contig100:662927..663038 1680866358.1314864-CDS-A-nodosum_M_contig100:662927..663038 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig100 662928..663038 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig100.56.2
>prot_A-nodosum_M_contig100.56.2 ID=prot_A-nodosum_M_contig100.56.2|Name=mRNA_A-nodosum_M_contig100.56.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1003bp
MCEETGGCLISWDGEDTSKHKTLSSRVNDLMAYVHKKSPVVMFRTEDSLH back to top mRNA from alignment at A-nodosum_M_contig100:651222..663461-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig100.56.2 ID=mRNA_A-nodosum_M_contig100.56.2|Name=mRNA_A-nodosum_M_contig100.56.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12240bp|location=Sequence derived from alignment at A-nodosum_M_contig100:651222..663461- (Ascophyllum nodosum dioecious)TGGTCTAGGCTGGGACGCGCTAGAGATACAGGCTTCGCTGAAG GTGAGGA
CCGCGGGGGGTGTCGTGTGCTGCTCTGGTGCAAACATATGTAGGAGCGTG
GTAGAGGACAACAGCTTTTGTAGGACGCAGGTGACGCCTTAGGCTCGCGT
TTGCCCACACTGGTGGAAGCTTCGGAACTTGTATTGTATTGCTCGAACCT
CAACCCGTCGTTGGTAGCTCTAAATAGTACCCCGAAAACGACGCTGGAAA
TTTCCGGGAAATTTCCCCGTTGTTTTCGTCTCTCTGGTGTTTAAAGAAAA
ATTTGAACGCGCCTAGACCTTCTGAGCATCCCCTAGTCGGAGGAAAAAAT
GACCAAATTTTCCGGGAAATTTCCCCGTTGCTTTCGTCTCTCTGGTGTTA
TTAAATCGTGTTATTATTAGAGT ATGTGCGAAGAGACCGGCGGTTGCTTG
ATCTCTTGGGACGGCGAGGATACCTCCAAGCACAAGACGCTCAGCAGCCG
TGTGAACGATCTGATGGCCTATGTTCACAAAAAG GTGAGAAGGTTTATGT
TGAGGCTCAGTATTCTCAGCATTTGATTTTGATAAGGCGTGGAGGCAAGA
TGGAGTATGCAGTATACACTAGACACTATACACTATACATTACACAGAAA
ATTTCGGTGTTTCTCAAAAGCCCGCTACTGCTCGCATACTTCCTCAACGA
TTGATACCTACTGAAGTACATGTACGTCCAAACAAGGAACACGTGCTTCC
TTATTGAAACGGTATGGTTCAATTCAACCCGATCTGTTTCGTAGTTGTGT
GGTTTCATCACGTAGATGTGTGATGAATCGCGTTTGAAGATCTTATGTAT
GATACCTGGTATTTTATAAAACTGTACGTCCAAACAAGCAGCACGTGCTT
CCTTATTGAAACGGTATGGTTCAAAAACTGTACGTCCAAACAAGCAACAC
GTGCTTCTTTATTGAAACGGTATGGTTTAATTCAACCCGATATATTTTGT
ATTTGTGTCGTTTTATCACATAGATGTGTGATAAACGTGTTTGAAGATCT
TATGTACCTGGTATGTGATGAAACTGTACGTCCAAACAAGCAACACCTGC
TTCCTTATTGAAACGGTATATGGTTCAATTCAACCCGATATGTTTTGTAG
TTGTGTCGTTTCATCGCGTACATGTGTGATGAACGTGTCTGAAGATCTTA
TGTATCTGGTATGTTATAAAACTGTCTGTAACAGGATTTCCGGTTCAAAA
TGCCTAAAGTTGCCCGATCCACATATTCCCAGTATAAACTTAACCACGTA
TCCGATCGAAGCAAGCGGCTGGAAAAAGAGCGTTCGGTCGTGTGGAGAGC
TCAAGCCTATCGTTATTTTCCTATCTCTCTTGTCATGTCTGTCATTTTTG
TCACGTCTGTCATATGGATCCGGCCAGTCCCCGGTTGTAATGTTCCGCAC
GGAGGATTCTCTTCATGGCGGCCCGGCGGACGGGGACGACTTGGACGACC
TCGACGGTTTCGACGGATTCACGTCACCGCAACTTGCGGAAATGAAGAAG
CCGCCTGCTGCCAGGGCTGGTATCATGCTCCG GTGAGCTACATACTATTG
GTTCCTCTTGTGAATCTTGTGAGTGATTGTGCTATATCGTCAAGGTATTG
TACGAGTTTAGGCGTTCGGGGGACGCGAGGACTCAAAGTTGTGCTGTATT
TAGTAAGAGTCTAATGAAACGGTAGCGTGCTCCGCTTACAGAATATACCA
GATTTAGTATAACAGAGAACAATACAGGGATACAGGAATACACACGCCCC
GAGTAGAATGAGCGGCACGGTTCGTTGCTCGCGTCGCGGGAGAGCTGCGG
AGGGCACCCGCGAGTGGAGAGCATGCCGAGGTCTCTTGTATGCTTCGAGG
TGGCGTTCTGGCTGATCCGTCCACCCATTTCATTGTAGTAAGTACACATG
ACAATGACACATACTATTAATAGCTTTTGGACGGTTTTCCCAGCCTCGGT
GTGGTTTGAAATCTACAGCGGTATGAACGGTATCGTATACCAGATACAGT
ACACGATTAGTGCGCAATTAGTCTATGGTTCTGTTTGTACTAATAGTAGT
TTGTACTTATAATAATGCCACCGTTGCCACTCATCGTTTGACCGTTTTTT
GTTTTCCCCTTGCTATACTGTACTGCTGTATGTTATGGTATTTCTGACGA
CGAGGGTCGGCAATTGTGCTCCGTGTGACAGGAGTAAATGTTACCGCACT
TTTCCGCGAAAAGGATTCATAGGGCACGGGTTTTGAGTGTTACTTGGCAC
GTTCTTATAATATAGGATAGTAGTAAAATCGTTCCCTTTATAAATAAAGT
CTGTTCCCATTATGAATATGGGAGCGGGACCCAAACTATTTTTTCCCACT
TTTTCACCGGTTTATATAAAGCCTATGATATATTCAGTATGATAGAGGAC
ACTACTATTAATGGGGCTGGATGTACTCAATAGTATTAGTAGTATTAGTA
GAGAGATTCACAGTGATACAAGTACAATTTCATACCTGGTACAAATCCAG
CTATCGACTACAATAACTTGAAAACCACTTCGAAGTCAAACAAACAAATG
CCCAACATGACTCAACGGCAGTCGAGCTCTTAAAGAATATTATAGATTAT
GTTGTAATAGTAATAGTGTGGTGTTAATAGTAATACAGCAGCAGCAGCAC
AAAAAAACAAGGGATGTATACTTGTAGAGGTATTATAACATGCAGCTAGC
TGTACGCTACTAAAGTCTAGGCTAGACTGTTTATAACTTGCAATAATAGA
GCTTTAGTATGGTAATGGTCTACTGTAGTTGCTGTACGGTAATGCTATAC
AGTAGATATGTTGAAAGTTATGAGTTTTTGCTACAACAAATAAACAGTAC
AGCTATTGATAGTATGTACGATCGGTACTTGCACATGGTCCATTCCTTCT
CTGCCTTGATAGTAATACTTAATACAGTATCAACGCTTTTGTCGCCTCCC
CTTGCTAAAGGGGTGGCTCCGGCATCTGGCCCATCCCGGAGCCTTTTTGG
GTGGACCGCTCGGTGGACGTTCTGCCGCCCAGGCCCGAAGCCCAGCCGGA
AATATGGTTCCGCAAGCCCGACCCGGGAGTCACGGACAGCGGATCCTCTG
CGGAG GTAAGAGCAAAGCAAGGGGTCCACCTCGAAAGCTCGGGCGGCCTC
TATTGAGAAAATAGGAAAGGGTAGGGTGAGCATGGCGTGTCTTGTGTTGC
CCGTTTGACTCGAGAGGCAGGTATAGACAGACGGACAGCAACGGGAAACA
ATTTTACCTCTGCACGACGTTTGTTTTGTCTCTCAAAAGACAACTCCGGA
GCAACATCAATAAAAATAGAAAAATAATACTTAAAATGGCGGCTCTGATT
CATGTGTGCAAGCATGTAGTCAATGCATGGAACCTGTTTCGTGAGGCATA
CAAGTACGGCGGCTCTTCTCTCCCATATCGCGGTAACACTTAAGATCTCT
CTGATGCCCTATAGACGTTCTGGCAGAGACTCCGCGTTTTTCCCCCGAGT
GTCCCGCTAACATTATGGGTGGCTACATCGAAGCGCTTGTAGTTCCATAT
CCGCTTCTGCGCCCGTCGGGCGCTTGCTCTTCATCCCCGGTCGCCTCTAT
GCATGGAAACCCCACTTTTCGCCCCTTCTTATTGCAGATGCTGGAGCAGC
TCGGCGTGACGGCGGACAACTACGAGCTAGAGTGGTGTGGTGACGGATCG
CGGTTGGACGTTCCGAGAGCAGTGACGTGGCCGCTCTTTGTAAAAGAGAG
TGGTCCAACCCCAGGAGCCGGCAAACCCTTCGGCTACCTTAG GTGATGGA
TGAAAGGCAGTTGAGGGTCGGGGAGGTAGCGGACGGATTTTGGTAACGCG
TCGATGGTTTCGTGGCTTGCTCCGTCCTTGCCCAAATCTCGATGGCTTTA
ATACTCCACAAAATATTTAGGAATAGGAAGGGCGGTGAGGATTTGACTGC
AAATAACACTCGCATTCCAAGAAGCTGTAGCTGTAGCTGTAGTGGATGAA
GAACGAGACGTGTTGCGACAGGCATATTTCATTTCGTGAATATGGCGTCT
CGTCTCGCGACATCCCGGCATTCTCAGGTTCAGCCAAACCTCGGGCAAGA
TTGTCATGGTGTTGCTGCCGTACAACTTCGAGGAGCTCATCCCACTCTTG
CGACTG GTGAGTCAAATCAACTCTACCTTGTAGCTCTACCATGTATGTAT
ATGTATATATATATATACTGGAGAGAGAGAGAGAGGGATTATATATACCT
ACTATAGTACGGCGATGTGAGAACTATCATTAATAATAGAATCCTGCACG
GCACGGAAGTCGGTGGCACTGATACTTGACTGTTTGCCCAGCATGCAGCA
TGCGCTCTGCAGGGCGATATGGCAATACAGCGTGCTCCTTGTCTTACTAC
CTTAGTTTTTAATGGTTTGGTCGCGAGCATTCTCTTCGCCGGAGTGTTGG
GCACAAAACCAACCCCGCCGTGACAAACGAACCCGACCATTGAAGAGCAA
TGTCTTGGCACCCTGCCGATTGGCTGCTCGCGCCCCGATTGGGTCACGTC
ACACATGATTCGCCGCCACGCCACGGTGCGGCACACGCGATGTTACGGTA
CACGCGATCGGCCTGGGACGCCACGGCCTGGGACGCCACCGCACGGTATG
GTACAAAACGGGAAAAAATGCTACGGCACGATACGGCGCCGCTCGGGACG
ACACCACAGTTCTTTTCCTCGGAACGGTGCGAACTATTGCACGGATTGCA
CGGACTCTGCCTAAAACAGTATAATAATCGCGTCGCGCGCTGCCCGGCCC
GGTGCTTTTTTGTTTTTCTGTTCCCGTACCACTACCCACGCACGTGCTGC
TGTTTCGTGGTCATTCCTGGATCATTCCGGGGTTGTACCGTGTATTCCAT
GACCCTCACTGTGCGCCCTCCGAAAGCGAGCGAGCACGGTGCAGGCAACC
AAGTCCCCCCAGCCGCCGGCCGTGGGATCACCTTGGGCCAGAGACTTTGT
TGCGTACCTGAAGGGAGTCCCCACGTACTACCTACCAGCGCTGCAGCGAG
TTTTACAG GTGTGGTGTGCCCGATGTATGTTGCAGTACCTCCTATCTTCT
GTGGGCATAAATGATTCGACCTTCGATGATTGTCTGCCTCGAGCCATGCT
TTCATTTTTCACTATGGATAAGTGGATATTTTTGTTGACAGTGTTAAGAG
AGTTACAGCATGCGCGGTATTGCTGCAAATTCGGTCTAGCTTCCTTTTTA
GCAGGCGCCGGTTTAACATGCTATCGTGCGGTGCGGCTACCGAGTGATGA
GGGCTACTGTAACTATCGCCTGAGTGATGAATCTTAGTATCGTGTATCAC
CATCTACTGTAACGATGATGAATCTCAGTATCTACTGTTACGATGATGAA
TCTCAGTATCCACTGTAACGATGATGAACTCTCAGTATCCATTGTAACGG
TTATAAATCTCAGTATCCACTGTAACGATGATGAATCTCCGTATCCTTTG
TAACGGTTATGAATCTCTGTATCTACTGTAACGATGATGGATCTCAAATC
TACTGTAACGATGATGGATCTCAATATTTGCTGTAACGATGATGGATCTC
AATATTTGCTGCAACCATGATAAAAGCCTAGAGCTATGATTGCACCCCCC
TGCCTACACTGTAGTTTAATACTGAGCGGTTTTTTTTTTGTCTTGCTTTT
TTAAAGCCAACTGCCTTCCTTCCTTCCTTCCGCTAAAACTCATGTTCCTT
TTAACGGACGGGGATCAACTTCGACCGCCTCAGCCTTTCGGTGTCCTATC
CTTGATTCCCGGGGAGAATCTGCAAGCTGGCGTGGGCGTTCACCATCGAA
AGATGGTAGAGAGACTGAACAACCTCAAGGATTTGGCGGCCCGTCACGTG
GAGCGCGCCGATCGCATCGAGAGGGCTGGCCGAGCACAG GTTCTAGCTGC
AGTGTGCTGTAGTTGTACGAGTAGTGTTAATTGTGCCTGGTATGCAGTAA
TTATTTATTAATATTAATATTAATTAGTATATTTGGTACATTTGTTTCTT
TTGGGGGGGTTGATCGGTGGAAATACTGGCTCATCGTTTCAACTCTACAG
TATATACAGGACATTTAAGCACTGTGAGTGTTGCGTTGGGGATATCTTCG
GTATTTTGTAGATTCATTTGCACTTGTGCTGGCGCTTGATATTTTTGAGG
AGATTGTAATCAATTGGAATTGATAGTTATGTAGGTATTTTGAGCGGGGA
GGGGATTGGTCGTATCGCACCGGTTGAGGAGGGACGGAATGGCTTCGTCC
CTCAACCCTTTTGTACCAAGCAAGCTGTTTTATATCAAACCAGTCTGAGG
TTCTACACGACAGCACCTGTAGAGCTTGCCTATGGTATTGCAACAGTTGT
GTGAAAGCGCTCTATTAGAGCTATTACTAGCTAAGCCTGGCGTTCTCTTT
GCTTATGTCAAACGAGCAGGATCCAGAGCATCGACAACAGCACCAGGACA
GCGCTGGCTCGGCGGTGGGGGCAGGCTTTGGTAATTCGAAGTCGTCCTAC
GCTAACGCCTTCCAGGTCCCCGTAG GTAAGAGAGAGAAAAGGGGGAAAAA
GGCATCTGGATTTCATTAAAAAGTTAAAAAGTCGATTGATTGGATCATGT
TGTCTGTTGTTTTCGTCGCCTGAGAGGTATAAATAGCTCTATTAATAGCT
GTACCACCCCGTGTCTTACAAGTTAAAAATAACATACTGAGTAATGTAGA
GGAGAGATACTTATTTTGAACCTGGTTTTTGGAAATGGAAGGGTCACTAC
GGTGCAGCAGTGCAGCAGTAGCTATACTAATAGTCATATTGATTGTTGTC
GATACGGTAAGCGCTGTGTATGGGAAACAGGACCCCCCCCCCCCCCCCCA
AAAAAAAGAAGGCGGACGAAAAGAACAGAAAAACGTATGAAATAAAAAAA
ACGGCCATCTTGATGGGACAATGAAGGCGTGAAAACGTAAAGAAAGCGAA
AACGAAAAAAAAACAGATATTCGAAGTATTTTATTTTATTTTAAATGTCG
TACCTCGCGAAAAACGCGGTACCAGGCATGCGCATGACTCGTCGAGCCTT
TTACCCCATTTTTCCCAGGCGAGCTCCTGTCTCAGTGGGAAACCATGCGC
GCCCAGCTTTTTGGTGCCGGTGGCGCCACTGTCAAGGGACTCTTCGCCGG
CGCCCCCGGGCCAAGCCGTCGTTCCCTGGCTCCCTCAGCGCATGGGCCTC
GATTTTCCATCAAAGCCGATGCCGCGGATGGTGATGGCGATGATGATGAG
GGCAATCGGCGGGGCCGAAGCACGGCGGAGGGGTCTTCGACGGGCATGGC
GGGGTTGAGAAGCCCCGTGCTGTGGTGCGTCGCACAGTCGCTGGCGCCCG
CCCGGAGTACCCAGGAGATGAGCAATTTCATGAGCAGGATGCGAAA GTGA
GTTGTAATTATGATTATGAGAAGCGGTTGGTATTATTTTCGCTCTACTTA
CTCTTTGACGACCGCAGAGTGGGAGGAAGGCGTTTTGCTGTTGATATGGA
AATGTATTCAGGGTCTGTAAAATTATCACCCTTTTTTAGTTTTATTTGCT
TCGCAGTCATATTACCAACATGATTTTTCGCTGTGATGCCCCTCCGGACA
GCGTGGAATTTCCCCGAGATCCTCTGAGTGACCCTGGACCCGATGAAAAC
ATGCCTCAAGGCGGTTTCCAGAGGCTCATGGCGTCAACGACGTTTGAGAG
CCCTTTCGCCAAGAAAAAGCTGGGCTTGAACCCTCTGGGATTAGACGAG G
TGGGTTTTGATACGAGATACAAGCAGCCCGTGTGGTGCACTCATATGGCA
GCAACAACCACCTGTGTAGAACTTCTAGATGCGGTTGGCGCCGGCCGTGG
GTTTCGTGGTCATGTTTGTGAAAACATTGCGGGGTCAGGGTCAAATATGG
TTGAGGCATTATGATAGGATGGAATGGGAAAGAGTGGTTTGTTTGGTGGC
ACTTATAAAGGAGAATTAAGTCGTTGGCCACAATTCACCACATAGAGCTA
TCTATTGGACTTGATATTAATATATATATATATCTGTCCCGTGACTATAT
CCTTTGACCCCAGGCGGCAAACGAGTCTGCAATTCTTGACGAGGACGTGG
AACTGGGGGATGATGGACACAAGAAGAACGGCGACCGCGAG GTGGAGTCC
TAGCGCGCAATGAGGGTCACGTATTCGGTGTCATTTCAATATCATAGACC
GAAGGCTATGTACAATTTTCGAGTTAGGCACAACGGCATACATTTACCCC
CTGTTTCGTGGACTGAAAGGGGTATCTGTAGAGTATCATAGGGAAAATGT
TTTGGACGAGTTCTTTGAACACATACCCTGGTACCAGTATTGTTTACGGT
AGTGGCGCATCCCCTTTGGCCACCTGAGACCTTGCTCCCAGCCAATCAGC
CCACCCGAATGACGTCACGAGATCTATGATCAGTTTGCACACCTCTCAAC
CCTTTTTATCAATAGCGAGCTACTTATCTAGCTTTTGTTCTTCTGCTGGC
ATAACGCGTCGCGATTACCTTCGTCTTTCCAGATCTTCGTCGCGGTTACC
TCAATCCCATAGCCCGTTAAATCTCTAGACCTATCCTTGCCGCCGAGTTG
GCGAGTCGAATCGATTCGTGGGTAAACGCACCATAAAATATTACCCCATT
ATTTTTCCCTCAAAAACTGAAAGCTGTGAAATAATGTGAACCACCTTCAC
ACCGGTCGCGGTCGAAAAGCATACTGATTGTTTGTCGTCTAAGAGAATGA
GCTCTGCGTATTGTTTCTCCTGCCCATAATCTAATACCACGATGCTTTTA
TCCCCCTTATTATCCACCCTATTATATATTATCCCCCCTACCCTCCCCCT
TCCATAATTTCCATGTGCCTTAGAGTATATAGTATTATTAATTATTAGAA
TAAAGTAGTCGTGGTGGCAAGATGACTGTGACCCCTTTCAGTATGTGTGG
CACAGAATAAGCTCCCTGTTTCAAGTTTTTTGCACGGCAAGTACAGTACT
GTTAAACAGCCAACAGTACGCAGTAAATGGACCACGAGTCGTATGAAAAT
GGGGACATGAATCAAAACCTCGCGGGAACGCCGAAACGGGATGGTGAGAC
TCCTTTCAACTGTGCAGCTCGCGGCCGACGTGAGCAAATATGTAACTCTA
CTCTGTACTGGCGCAACATATGCAATGGTTCCGAAGTACTTGGTACGACT
TTACCCGCTCTTGTCAGCGGCGCGATACGATGTGATAGACTTGATCTGAT
GCCGCTTTCGATTTGATTTTATGCTTTCAAAATTCGAGCAGGCAGCTGGC
GACAGCGCTTCGTCCGACGGCGCCTCGGGCGAATCCGACGCGGGCAATGC
CGCGTCTCCAGGAGAGATAGCAGCAGGGTCCAGCGATGATTCCTCGACCT
CCACGCCCTCTACAACTCCCGGGCAATCTTCCTCTGTCTCGAACCAAGGT
CGTGGCCAAGGCACCAACGGAGAAATCAGGCGTGGTTCCAGTTTCACCCG
GCGGCAGCTGCCCAAGCTGATAGCGAATCGTGGCAGGCGCAGAATGCGAC
CTGACGCCAACTATCGTGACGCCAAGGAAGGAGGAATATCTACGACGTGG
AAAAGCTCCCTTCCTCCACCCGTCCCCGCCCCGTCCTCCAACGGGAGTTC
GATTGAAGGTGGGAGCTTGCTACTTCCTCCAGCATCGCCCGCCCTGCCGG
CGCCGCGGACCCCCGACTACTCCCCGCCCCGGACCCCCGACTATTCCCCT
CCGCCTAGTCCGTTGACTGACGCTGCTGACGAGAGGAAAATCGACTTTAG
CAAAAACTTGAGGGTCCCAAAAGGTTTTTCTGGGAGTAATAAGAGAGAAG
AGGATCTGTCAAGCGACAAGACCATCGCCACTGCTGCGGATGACGGCGAC
GACAGCGCTGACATTCGCGACAGGAACGCCACCCGTGGGGAGAAAAATGG
GCCACCGTTCTCGACGCCGCCCGCGCCGCGACCTCCGCTCCCGAAGCCAC
GACCTCCGCTCCCGAAGCCACGACCTCCGCTCCCGAAGCCACGACAACCG
CGGCCTCCTGCTAAGCCTCGTCCGCCGTCTGCACCAAGGCCCCCCCCGCA
AAAACCGTCCCCAAATAACGCTCCTCCCCCGCCGAGACATCCTCCCCAGG
TCATGCCCCCGTCTCTTCCGCCGAACAGGAGAACGACCTTTGCGCCCAGC
CCTTCCCCTGCGACGCCAAAGCGTACCACATCGCCCGCCCCGTTTATCCC
TACAGTGTCGCCCGCCACTTTCGGTCCCGGGACGTTCTCCCCCACCCGAT
TTCCAACGCCGAGGTTGGCGCCAATTACACCGATCAGCATACCAAGTTTC
ACACCGACGATTTCTCCGTTGAGTTACACGCCCCAAAATGACGACAGGGC
TACCAAG GTGTGTGACTTTTACAATTAGTATTGTTGGCACTTTGTAAGCG
TGTCTAGGATTTCCTTTTGAGAGCGTGACGTTTCGAAATCGGGGCGTTGA
GCGGGGGTGCAGATTTTTTTGCTGCGGACCTAGACTCGATGTGCAATATT
GAAGCTGAAAAATGGGCGCGCCCCTCCAAAGCGGCCCCATCTTGAAGAAA
AACTCTACTCTATCGTATTTTTGACTTATTTTGACGCAAGCGAGAACCCT
GCGAAATTAAGTGGCTTGCATGAAATTGAGGCTTTGTCTGCTGTACGCGC
ATGTAATAGTAAGGACATCGCACTTTTAAAAGCTGACGACGCCTGGTGAT
GGAATTCGATTCGCCCGTATACCGTTAACAAAAGTGTCCAGCAGACATAG
CTTCCCAATAGGAAAAAATCATCAAGGCCTGTTCTACAGTTATCGTATAC
GTAGTGACCAACCATTGCGTTATTTACCGTCCTCCCCGTATAAATCGTCG
TTTCGGGCCCCAAATCGCTCGCTTTTCCTTGAATATAACAATAAAAAAGA
GTGAACGCAGCGAGCGACCAGCTGATGACTCCAGGAGAATGGCGAATAGG
GAGGAAATTAGTGTAGACGACGAAAGTTCGCGGAAACGGACGAGGGACGA
TGCAGCCAAAGAACACAGG GTAAGAACAGCACTTTCGTACCAGTACTATT
TTAGTAGAACGGTATATTTTTATTAAGGATGGTACAAGACTAGTAGTAGA
TATAGTGGTGTTGCCCGCTGACTGCGTCTTTGGGCCGTCGGAATGTCTAG
ATTCCGTTATTCCGTTAATCGTGCTGGAAGGCGAAATCCATTCCATCAAA
CTCTACTTTCTTGTGCCGTTGAACTCCTCGGCGCTATATTAGAGTGTGCA
CCTCTAGATATACGCATTGATAGTCTCTTTCCCTCTTTTTTGTCTTGGGA
CTTTTGGACTGTTTGCGGATCTTGTCAGAGTCCGTTACAGCTAGCCGCCA
AAACGCATGAAGACTCTTTAACAGCGACGTCGTCGGTACGTAATCATCAA
TAAAACGAAACATGGTCCATGCCGCGTTGTCAACTGTTTGCTCTTTCGAG
ACGCAGGCGCTGGATCCGCCAAAAGCTATTAATCCTCTGAATCCCCTCAA
TCCGCGTGACTACATACTCCCCGATGGATGGATCCTGGCATTCTCCAAGC
GGGAAAAGCGGGACTACTTCTTCAATCAGAGGAGCAACGCTACTCAGTGG
CACCTGCCAGAAGGCAGCCGACTCAAGTACAAGTAG ATGAACCAACCGAG
CTGGCTTTTTCGAAATCGTTTGTCCGAGGTTTTATTCTCCGTGTCTGGTA
CAAAATGCATCATAGTCTATTAATAGTGGGCCGGCTGTATAGCTCGGAAG
TGAAAAGATCGCGATTGCTCTTGTTTTGTTTTGGCGTTTTTTAACCAAGT
ACTTGCGAAGTACTGCACAAACTATGGTTGAAAAAGCATAACATTGCGTT
GCGACTGACCTGGCATGCCCTGAAGCTCATTGTGTACCTGAAAGTTCTCG
ATTGTCCTATACTGTAGGTTTTTGTTTTGGGTCGTCAGGTGAATACCGGA
ATTGCGTAGCCTCTCTCTTCTGCTGTATATGCCAAGAGCCGTATGCTCCA
CAAGGCAAGGGATGTGTTCCCTAGCAGCGAAAAGGACAAAGGACTACTAG
TATGTCACACGGAAATAATACTGGCAAACGACTGGGAAGC back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig100:651222..663461-
>mRNA_A-nodosum_M_contig100.56.2 ID=mRNA_A-nodosum_M_contig100.56.2|Name=mRNA_A-nodosum_M_contig100.56.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=3009bp|location=Sequence derived from alignment at A-nodosum_M_contig100:651222..663461- (Ascophyllum nodosum dioecious) back to top