mRNA_A-nodosum_M_contig10.114.3 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: D7FM51_ECTSI (FAM194 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM51_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.950e-117 Identity = 247/558 (44.27%), Postives = 322/558 (57.71%), Query Frame = 1 Query: 1501 PRIRSTGLEVGPTHGLGTTIYEDHDRQDSSPGLRRSISWAGDATGKGCTENRESGDVFSPTARLKKGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATF---------SGSVASENSRST----EHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRSRVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRIQLARANAMASETDG---DDGEGYGVLVISDALGEAEVVALEKAFYSGSQRKK---EERLVVGLAALKGHVSEMSKSARQVVSIGFTESENGKQAVLSAHLALVADVAVTKPLRATALEAVF-QCLARGTTAASDTCMG------EGG-RVSISPSCGELGGGDRRYKGATPLRLLEKMEALKAQARKGVLTGSVLGGKERRLRP----EGALLGNSEILVTAQETEYRGYTLNSSTLRHL 3081
PRIRSTGLEVGPTHGLG+ IY+D D F+ +RL+KGGKWLGEL+V ++ ENP+LKR L+ FLEEE P+QLV VL VR +P CNK++ +AELAN L+Q ++ +G S S A +SR++ E ++V+VD EH A+LYGV+++PAFLMF+GGRL W GTLGG+P+KAAPP AA RVLLVEP A+ QI+TER +RRFGC+WDL L+A QA+ RIQ+AR N+MAS++ +GEGYGVL+IS+ALG AEV+ALEKA + G + +VVGLA ++G S M +A +VVS GFTE+ +GK+AVLS HLALVADVAV+ P+R +ALEAVF +C R AS +G +GG +S+S SC L GGD RYKG TP RLL+KME + AQ G+ + R+ RP A G IL++AQET +G+ L STL+ +
Sbjct: 232 PRIRSTGLEVGPTHGLGSMIYDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDDAFAAASRLRKGGKWLGELDVRLQVSAENPLLKR---------------------------------------------LRAFLEEEAAPDQLVTVLGVRGDDPACNKVQTIAELANCFLVQGLSSSSGEGXXXXXXXXXXXXMNNNSRSSSAAGPSSRASVSGAEKYRMVRVDFAEHRATAELYGVQALPAFLMFQGGRLAWVGTLGGSPLKAAPPAGAAGGRRVLLVEPCAKRQISTERALRRFGCSWDLVLNAPQALLRIQVARTNSMASDSGNAASPNGEGYGVLMISNALGAAEVIALEKALHGGGAGFSGGGADSVVVGLAHVQGDPSAMGSAALRVVSAGFTEAADGKRAVLSPHLALVADVAVSTPVRTSALEAVFDRCCNRPKEDASVAGVGGKRGDGKGGVSLSMSASCSALEGGDGRYKGVTPSRLLQKMEEVGAQLAMGIFASNQATKAGRQHRPGRGGAAASAGKGGILLSAQETSCKGFLLERSTLQRI 744
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A5D6XIH5_9STRA (FAM194 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIH5_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.720e-29 Identity = 110/328 (33.54%), Postives = 156/328 (47.56%), Query Frame = 1 Query: 1666 DVFSPTARLKKG--GKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLM-------------------------FRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRI-----QLARANAMASETDGDDGEGYGVLVISDALGEAEVVALEK 2532
D + RLK G G+WLG +E+HR + +ENPVL+R L +SGRY++E+SVLG+ T +G LR +PA +L FL E +QLV V C+R + C A L QI LQ + T G P T + + IVK DL E L + Y + +VP FL+ F GRL+ A +LGG P++ P A S RVLLVE A+ Q+ E+V+R+ WDL QA++ + LA A +S T G YGV+++SDAL + EV ++++
Sbjct: 363 DSTASLKRLKDGETGEWLGSVEIHRMIAMENPVLRRGGPLTSASGRYSRELSVLGRGTR---------PSGEHLRLLPAHKLSSFLREACASDQLVVVACLRVDD--CQSRAAEAVL-EQIQLQLTAATKGVGA----PQTAENDIRRKCC-------IVKCDLSESTLLTERYQIHAVPTFLVYACLLTDAGEESSAHSVTMRAPTPRFYDGRLVHATSLGGAPIRVVPATRNAHLSNQMDQLPRVLLVEKSAKQQVAIEKVLRKEAFQWDLASHGEQAVAYLTRFPRSLAGNRATSSSTSGSTD--YGVVLLSDALDDFEVRSIDR 665
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: K3XA95_GLOUD (FAM194 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA95_GLOUD) HSP 1 Score: 137 bits (344), Expect = 3.130e-29 Identity = 112/369 (30.35%), Postives = 170/369 (46.07%), Query Frame = 1 Query: 1501 PRIRSTGLEVGPTHGL-GTTIYEDHDRQDSSPGLRRSISWAGDATGKGCTENRESGDVFSPTARLKKGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRIQLARANAMASETDGDDG--EGYGVLVISDALGEAEVVALEKAFYSGSQRKKEERLV 2577
P + TG EVG L G + ++ D+S L+R +NRE+ GKWL +E+H K+ +ENPVL+RS L +SGRY++E+SV G G TG LR I A +L FL+E+ EQLV + C+R + ++ M E Q ++ S ++ A S+ S + +VK DLGE P LA+ Y + + P FLMF RL+ ++GG ++ P A S R LLVE + QI E+V+++ WDL QA+S N + G GYG++++SD L + EV ++++ + + E LV
Sbjct: 269 PILPKTGFEVGHEPTLFGAPVKKN----DASESLKR-------------LQNRET-------------GKWLDSVEIHHKIALENPVLRRSGPLTSASGRYSRELSVQG---------GGVKPTGEHLRLISACKLDEFLKEKCVNEQLVVLACLRSDDCQSRVVEAMLEQVQQ-QIRDSAMSPA---------------LSQLSGIRQKCCLVKCDLGESPVLAERYRIHATPTFLMFYDQRLVHVTSMGGAAMRVFPATKNAHLSGQMDYLPRALLVEKNVKQQIAIEKVLKKEAFQWDLANHGEQAVSYFTRLPRNTNGTTATGKGAITAGYGIVLLSDTLDDFEVRSIDRCVRQKDKARPSESLV 582
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: W4G127_9STRA (FAM194 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G127_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.300e-26 Identity = 94/307 (30.62%), Postives = 156/307 (50.81%), Query Frame = 1 Query: 1681 TARLKKGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGR----VTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRI-QLARANAMASETDGDDG--EGYGVLVISDALGEAEVVALEKAFYSGSQRK 2559
+A K GKWL L++ +L + NPVL R+ +L +SGRY+ +I + G G A G L + RL FL+++ +QLV V C+R+ + T + + + +L IL G + V + T S + + R +VKVDL E +A + + + P FLMF G+L+ A +LGG+ V+ AP + R LLV+ A+ Q+ +E+++R+ WDL L A QAI R+ +L++A+A+ ++G Y +L+I D +GEA + L++ + +K
Sbjct: 318 SALQDKDGKWLSSLDIRTRLELSNPVLPRTAVLCNASGRYSVDIQIPG---------GSAQPEGTKLEVVAGCRLDGFLKDDCASDQLVVVACLREDDLTSRQAEKVLQLVATILADPQGDLSCHALPQNIVYIYMLTCSAGIVNAKYR------LVKVDLAESREIAKRFCLHATPTFLMFFEGKLLGATSLGGHAVRIAPTTRNVHLTNKMDHPPRTLLVQGSAKQQVVSEKILRKELFAWDLALDADQAIQRVSKLSKASAV------NNGVCPCYNLLLICDDVGEAGLRTLDRFIRTTDSKK 603
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A024UBZ4_9STRA (FAM194 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBZ4_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.460e-23 Identity = 91/312 (29.17%), Postives = 148/312 (47.44%), Query Frame = 1 Query: 1696 KGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRI-QLARANAMASETDGDDGEG----YGVLVISDALGEAEVVALEKAFYSGSQRKKE---ERLVVGL 2586
K GKWL L++ +L +PVL R+ +L +SGRY+ +I + G G A G L + +L FL+++ +QLV V C+R+ + + K + + +L IL D P + + R +VKVDL E A + + + P FLMF G+L+ +LGG+ V+ AP + R LLV+ A+ Q+ +E+ +R+ WDL L A +A R+ +L +A G G Y +L++ D +GEA++ +LE+ S +K ++ VVGL
Sbjct: 320 KDGKWLSSLDIRTRLERASPVLPRTAVLCNASGRYSVDIQIPG---------GSAQPEGTKLEVVSGHQLDDFLKDDCATDQLVVVACLREDDLSSRKAEKVLQLVATILAH----PQEDLSPHALPQAIVAGIVNAKYR------LVKVDLAESREFAKRFSIHATPTFLMFFEGKLVGVTSLGGHAVRIAPTTRNVNLTSKMDHPPRTLLVQRGAKQQVLSEKTLRKELFAWDLALGAEEAFQRLSKLNKAT---------QGHGVPPCYNLLLLCDDIGEADLRSLERYIRSTDSKKAPNPTQQCVVGL 603
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A024UC00_9STRA (FAM194 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UC00_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.060e-20 Identity = 73/247 (29.55%), Postives = 117/247 (47.37%), Query Frame = 1 Query: 1696 KGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAISRI 2415
K GKWL L++ +L +PVL R+ +L +SGRY+ +I + G G A G L + +L FL+++ +QLV V C+R+ + + K + + +L IL D P + + R +VKVDL E A + + + P FLMF G+L+ +LGG+ V+ AP + R LLV+ A+ Q+ +E+ +R+ WDL L A +A R+
Sbjct: 320 KDGKWLSSLDIRTRLERASPVLPRTAVLCNASGRYSVDIQIPG---------GSAQPEGTKLEVVSGHQLDDFLKDDCATDQLVVVACLREDDLSSRKAEKVLQLVATILAH----PQEDLSPHALPQAIVAGIVNAKYR------LVKVDLAESREFAKRFSIHATPTFLMFFEGKLVGVTSLGGHAVRIAPTTRNVNLTSKMDHPPRTLLVQRGAKQQVLSEKTLRKELFAWDLALGAEEAFQRL 547
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A397F2F1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F2F1_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.850e-20 Identity = 74/245 (30.20%), Postives = 120/245 (48.98%), Query Frame = 1 Query: 1681 TARLKKGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHDQIVKVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRS-------RVLLVEPFARDQITTERVMRRFGCNWDLTLSA 2394
+A K GKWL L++ +L + NPVL R+ +L +SGRY+ +I + G G A G L + RL FL+++ +QLV V C+R+ + T + + + +L IL G + + + + R +VKVDL E +A + + + P FLMF G+L+ A +LGG+ V+ AP + R LLV+ A+ Q+ +E+++R+ WDL L A
Sbjct: 129 SALQDKDGKWLSSLDIRTRLELSNPVLPRTAVLCNASGRYSVDIQIPG---------GSAQPEGTKLEVVAGCRLDGFLKDDCASDQLVVVACLREDDVTSRQAEKVLQLVATILADPQGDLSC----------HAAGIVNAKYR------LVKVDLAESREIAKRFCLHATPTFLMFFEGKLLGATSLGGHAVRIAPTTRNVHLTNKMDHPPRTLLVQGSAKQQVVSEKILRKELFAWDLALDA 348
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A7S1GB45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB45_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 9.620e-12 Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 1 Query: 1696 KGGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASR---LKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQRSGLTNADGRVTRFPATFSGSVASENSRSTEHD--QIVKVDLGEHPRLADLYGVKSVPAFLMFRGGR--LIWAGTL 2247
KGG+WLGEL++ R++ NPVL+RS L+ +SGRY ++ V K G R +P R L +L E P+QLV V C+R+ +P C + + + E N L ++P + A E + +IVK D+ E + + + ++P FL F GG L +AG L
Sbjct: 409 KGGRWLGELDIKRRIAGANPVLERSTQLRGASGRYCVDVPVESK--------------GTVFRKLPVVRARDLDKYLSEIARPDQLVLVACLREDDPLCRRAQQLLEHVNGTL------------AAQYPEDPNTGKADEGAPPANPCPYRIVKCDMTESREMTRRFAIHALPMFLSFMGGPSGLCYAGPL 573
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A7S3YD84_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD84_HETAK) HSP 1 Score: 63.9 bits (154), Expect = 1.130e-8 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 2140 KVDLGEHPRLADLYGVKSVPAFLMFRGGRLIWAGTLGGNPVKAAPPETAATRSRVLLVEPFARDQITTERVMRRFGCNWDLTLSASQAIS 2409
+V++ + + VKSVPAFLMF G+L++ G+LGG KA P R R LLVEP R Q+ E++++ WDL L+ + A +
Sbjct: 10 QVEMAQDEAFGRQFKVKSVPAFLMFYNGQLVYKGSLGGLRAKALPAHHH--RPRTLLVEPCFRAQLQAEKLLKANKFAWDLALTGAAAAA 97
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Match: A0A662YAF1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAF1_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.140e-8 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 1657 ESGDVFSPTARLKK--GGKWLGELEVHRKLFVENPVLKRSKMLQMSSGRYTKEISVLGKTTSVKSLTGKAVATGVPLRNIPASRLKPFLEEETGPEQLVAVLCVRQSNPTCNKMKVMAELANQILLQR 2034
++ D RLK GKWLG +E+H K+ +ENP L R+ L +SGRY++E+ V G G L +P ++L FL E+ ++LV V C+R + + M E IL +R
Sbjct: 179 QANDASETLKRLKNEANGKWLGSVEIHEKIALENPGLPRTGRLTNASGRYSQELPVAD---------GGVKPVGERLLTVPGAKLDVFLREKCADDELVVVACLRADDRQSRTTEAMLEQVQLILSER 297 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.114.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10.114.3 >prot_A-nodosum_M_contig10.114.3 ID=prot_A-nodosum_M_contig10.114.3|Name=mRNA_A-nodosum_M_contig10.114.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=565bp MSLRMTRGQRSGTGEAFLGSIVERMCSRRYSQRAPRIRSTGLEVGPTHGLback to top mRNA from alignment at A-nodosum_M_contig10:1075678..1081822- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10.114.3 ID=mRNA_A-nodosum_M_contig10.114.3|Name=mRNA_A-nodosum_M_contig10.114.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6145bp|location=Sequence derived from alignment at A-nodosum_M_contig10:1075678..1081822- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10:1075678..1081822- >mRNA_A-nodosum_M_contig10.114.3 ID=mRNA_A-nodosum_M_contig10.114.3|Name=mRNA_A-nodosum_M_contig10.114.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1695bp|location=Sequence derived from alignment at A-nodosum_M_contig10:1075678..1081822- (Ascophyllum nodosum dioecious)back to top |