Trimin1|160152|e_gw1.12.52.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160152
Unique NameTrimin1|160152|e_gw1.12.52.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length417
Homology
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BLAST of jgi.p|Trimin1|160152 vs. uniprot
Match: A0A835ZES9_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.340e-82
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0 
Query:    1 LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ 416
            LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ
Sbjct:    1 LQYLRDNGCPWNASIYSAALSGGHVKVLHXXXXXXXXXLPTKDGSEQAARNGSLEVXXXXXXXXXCWDEFCSCTAAAGXXXXXXXXXXXXXXXXXNASIYSAXXXXXXXXXXXXXXXXXXXXLSATCRSWQAAEAGSLAXXXXXXXXXXXXDTSVCGIAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDERTIXXXXXXXXXXXXXXXXXXXXXXXXQQSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTTDGAELAARNGXXXXXXXXXXXXXXXDRSICEXXXXXXXXXXXXXXXXXXAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIHLLSVTAAQEGHVKLLQ 416
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160152 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZES9_9STRA4.340e-82100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 211..416
e-value: 5.3E-18
score: 67.2
coord: 2..210
e-value: 8.5E-11
score: 43.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 47..306
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 2..126
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 131..314
coord: 2..126
coord: 294..416
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 131..314
coord: 294..416
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 323..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:310617..318380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160152mRNA_3716Tribonema minus UTEX_B_3156 mRNAContig_12 310617..318380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160152|e_gw1.12.52.1 ID=Trimin1|160152|e_gw1.12.52.1|Name=jgi.p|Trimin1|160152|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=417bp
LQYLRDNGCPWNASIYSAALSGGHVKVLHYAREQGCPWLPTKDGSEQAAR
NGSLEVLQWAIQNGCCWDEFCSCTAAAGGGHLCVLQYLRDNGCPWNASIY
SAALSGGHVEVLRYAREQGCPWLSATCRSWQAAEAGSLAALQWAIENGCC
WDTSVCGIAATKGDFEVLEWAYANGCEWDESICCSAAEQGNKAVVDWAAA
RGCTMSAATCAVAARSGHLPSLQWLREQGCEWDERTICAAAAEAGHLAVV
KWLHSAGCQWDQQSCTAAARGGHLHVLQYLRDNECPWDASIYSAALSGGH
IEVLRYAREQGCPWLPTTDGAELAARNGSLEVLQWAIENGCCWDRSICEL
AARKGDVAMLEWAVANGAHFDSCGVAFEAGRAGQVSVAKWLFARKESSIH
LLSVTAAQEGHVKLLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf