Trimin1|151095|gw1.27.154.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|151095
Unique NameTrimin1|151095|gw1.27.154.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length181
Homology
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BLAST of jgi.p|Trimin1|151095 vs. uniprot
Match: A0A836CFH7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFH7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.030e-26
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 RNRHCSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSRXXXXXXXXXXXXXXLPGERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETRRRGSTASSSSAAQQD 181
            RNRHCSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSRXXXXXXXXXXXXXXLPGERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETRRRGSTASSSSAAQQD
Sbjct:    1 RNRHCSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSRXXXXXXXXXXXXXXLPGERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETRRRGSTASSSSAAQQD 181
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BLAST of jgi.p|Trimin1|151095 vs. uniprot
Match: A0A835ZB16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB16_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.630e-16
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0 
Query:    1 RNRHCSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSRXXXXXXXXXXXXXXLPGERR 60
            RNRHC+A+GC RQPSFGYDG+PPQFCA HK  GM+NVVSRXXXXXXXXXXXXXXLPG+RR
Sbjct:  107 RNRHCTAEGCTRQPSFGYDGQPPQFCATHKVAGMSNVVSRXXXXXXXXXXXXXXLPGDRR 166
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BLAST of jgi.p|Trimin1|151095 vs. uniprot
Match: A0A836C8S2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S2_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.030e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    5 CSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSR 40
            C+A GC+R+PS+ YDGR   +C +HK +GM N VSR
Sbjct:  134 CAASGCRRRPSYNYDGRRAAYCHKHKAEGMTNQVSR 169
[Close]
BLAST of jgi.p|Trimin1|151095 vs. uniprot
Match: A0A835ZIM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIM1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.090e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    5 CSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSR 40
            C+ADGC +QPSFG+ G  P+FCA HK  GM +V ++
Sbjct:    9 CNADGCDKQPSFGFIGEKPKFCATHKLGGMTDVKNK 44
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151095 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CFH7_9STRA6.030e-26100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZB16_9STRA9.630e-1685.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8S2_9STRA4.030e-555.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIM1_9STRA4.090e-555.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 80..111
e-value: 9.0E-7
score: 29.4
coord: 42..76
e-value: 6.6E-8
score: 33.0
coord: 117..150
e-value: 4.9E-5
score: 23.8
coord: 5..38
e-value: 3.0E-8
score: 34.1
NoneNo IPR availableGENE3D6.10.140.110coord: 98..157
e-value: 1.8E-10
score: 42.9
coord: 58..97
e-value: 2.4E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:61544..62816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151095mRNA_6872Tribonema minus UTEX_B_3156 mRNAContig_27 61544..62816 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|151095|gw1.27.154.1 ID=Trimin1|151095|gw1.27.154.1|Name=jgi.p|Trimin1|151095|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=181bp
RNRHCSADGCKRQPSFGYDGRPPQFCAEHKYDGMANVVSRRCDAPDCKRQ
PIYGLPGERRPRFCSSHKGADMIDIKNRRCEAEGCSTHPTYGFAGQKRRF
CGAHKLEGMLDFKSSRCSTPGCPRRPSYAFPGKRASRCSGHKVMGMIDVK
HRHCEAPNCSKRVETRRRGSTASSSSAAQQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys