Trimin1|147549|gw1.241.19.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|147549
Unique NameTrimin1|147549|gw1.241.19.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length146
Homology
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A835YZB9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZB9_9STRA)

HSP 1 Score: 311 bits (798), Expect = 8.350e-108
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146
            AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG
Sbjct:    1 AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.180e-29
Identity = 67/147 (45.58%), Postives = 83/147 (56.46%), Query Frame = 0
Query:    1 AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFA-TPLYQSWHPVSNFADTGERTG 146
            +G         K V  L +HI   C+ D  GV  YY T  + AG+   RC RGTN  E YH  LR+LL+ Y  SP LAHS+LL FN R NVRMA K+  LP E   F+ QY+ E +Q  TA W+   PL+  W    + ADTGER+G
Sbjct:   10 SGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAAGITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSG 156          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 7.390e-29
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0
Query:   12 KAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFA-TPLYQSWHPVSNFADTGERTG 146
            +AV+ LR+HI   C+ D   V  YY +  + AG+   RC RGTN  E YH  +R+LL+ Y  SP LAHS+LL FN+R NVRMA K+  LP E   F+ Q++IE +Q  TA W+  +PL+  W    + ADTGE++G
Sbjct:  294 QAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSG 429          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 9.220e-28
Identity = 65/136 (47.79%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   12 KAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFA-TPLYQSWHPVSNFADTGERTG 146
            +AV+ LR+HI   C+ D   V  YY   T  AG+   RC RGTN  E YH  LR+LL+ Y  SP LAHS+LL FN+R NVRMA K+  LP E   F+ Q++IE +Q  TA W+  +PL+  W    + ADTGE++G
Sbjct:  294 QAVELLRKHIESGCLSDPERVPLYY---TKSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSG 426          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.410e-20
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 0
Query:    6 FSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGL-QRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146
            F  +  +A++ LR HI   C  D+   + Y+    D   L   +RC RGTN  E YHL +R L+A + +SPRLAH LLL +N+R N+R + K+  L      FY Q  +E +Q +T+  +    Y  W P S + DTGER+G
Sbjct:  238 FRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVA-WCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSG 378          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.830e-20
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 0
Query:    6 FSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGL-QRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146
            F  +  +A++ LR HI   C  D+   + Y+    D   L   +RC RGTN  E YHL +R L+A + +SPRLAH LLL +N+R N+R + K+  L      FY Q  +E +Q +T+  +    Y  W P S + DTGER+G
Sbjct:  811 FRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVA-WCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSG 951          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 4.260e-20
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 0
Query:    6 FSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGL-QRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146
            F  +  +A++ LR HI   C  DA   + Y+    D   L   +RC RGTN  E +HL +R L+A + +SPRLAH LLL +N+R N+R + K+  L      FY Q  +E +Q +T+  +    Y  W P S + DTGER+G
Sbjct:  413 FRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVA-WCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSG 553          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.480e-16
Identity = 53/143 (37.06%), Postives = 68/143 (47.55%), Query Frame = 0
Query:    4 AFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG 146
            A    K  KAV+ LR+HI   C+ D  GV+ YYA      GL R+RC RGTN  E YHL      A Y+ SP LA S+LL FN R N++M  K+ D    +                      P++  W    +  DTGER+G
Sbjct:  898 ALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYHL------ASYSASPALAQSVLLEFNFRWNLKMMVKNRDWDPSF----------------------PVFPQWQAAVDSVDTGERSG 1012          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.670e-16
Identity = 50/123 (40.65%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRCARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGW 123
            +G      K   AV  LR+HI    + D   V+ YY T     G+   RC RGTN  E YH  L +LL+ Y  SP LAHS+LL F HR N++MA K  +L  E    + Q+ IE +Q  T  W
Sbjct:  302 SGEILLRPKAMDAVNLLRRHIEADRLSDPNDVALYYTTGKTTGGITSRRCVRGTNSTEGYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVK--NLSKEIGGCFDQFDIEIIQRETTSW 422          
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Match: A0A6H5KP32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP32_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.430e-10
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   67 LLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDLPAEYTHFYSQYKIEELQDLTAGW-FATPLYQSWHPVSNFADTGERTG 146
            LL+ Y  SP LAHS+LL FNHR N++MA K+ +LP E    + Q+ IE +Q  T  W   +P++       + ADTG+R+G
Sbjct:   84 LLSTYCASPALAHSILLEFNHRWNIKMAVKNRNLPKEIGGCFDQFDIEIIQRETTSWDLDSPVFSERVSALDAADTGQRSG 164          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|147549 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YZB9_9STRA8.350e-108100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5K9U3_9PHAE1.180e-2945.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE7.390e-2946.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE9.220e-2847.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD89_9PHAE1.410e-2038.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE1.830e-2038.733'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KEU8_9PHAE4.260e-2038.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE1.480e-1637.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM2_9PHAE2.670e-1640.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP32_9PHAE5.430e-1043.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_241contigContig_241:44634..45071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|147549mRNA_18179Tribonema minus UTEX_B_3156 mRNAContig_241 44634..45071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|147549|gw1.241.19.1 ID=Trimin1|147549|gw1.241.19.1|Name=jgi.p|Trimin1|147549|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=146bp
AGVAFFSKKCWKAVQNLRQHITGSCVGDAAGVSPYYATHTDKAGLQRWRC
ARGTNKNERYHLPLRKLLAQYNLSPRLAHSLLLPFNHRRNVRMAGKHGDL
PAEYTHFYSQYKIEELQDLTAGWFATPLYQSWHPVSNFADTGERTG
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