Trimin1|161862|e_gw1.18.296.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161862
Unique NameTrimin1|161862|e_gw1.18.296.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length185
Homology
[Close]
BLAST of jgi.p|Trimin1|161862 vs. uniprot
Match: A0A835ZBW1_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW1_9STRA)

HSP 1 Score: 368 bits (944), Expect = 8.440e-129
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHVI 184
            MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHVI
Sbjct:    1 MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHVI 184
[Close]
BLAST of jgi.p|Trimin1|161862 vs. uniprot
Match: A0A836CLZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLZ6_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.670e-79
Identity = 134/164 (81.71%), Postives = 147/164 (89.63%), Query Frame = 0 
Query:   21 SPSTNPQ--VIACCNVVLGASKECVASLIAAMHTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTH 182
            S STN    V+ACCNV LG SK C+ASLIAAMH Q+ ++PFMTA GC AVLIEQQCGH SPKNFALSAALYMFYQQRLDAGAI SLQFVNPRVKFSRLA+M+LPALA +KD+LVQCRGKELK+LSV CAIELARAWNC+VFQ+AM+R KKQDDLSDAMLYAVTH
Sbjct:  998 STSTNSMSPVLACCNVKLGDSKACIASLIAAMHAQMCDHPFMTADGCGAVLIEQQCGHVSPKNFALSAALYMFYQQRLDAGAISSLQFVNPRVKFSRLAQMDLPALAQFKDELVQCRGKELKKLSVKCAIELARAWNCTVFQEAMIRVKKQDDLSDAMLYAVTH 1161
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161862 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZBW1_9STRA8.440e-129100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CLZ6_9STRA1.670e-7981.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:918078..918632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161862mRNA_1390Tribonema minus UTEX_B_3156 mRNAContig_18 918078..918632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161862|e_gw1.18.296.1 ID=Trimin1|161862|e_gw1.18.296.1|Name=jgi.p|Trimin1|161862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=185bp
MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAM
HTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGA
IGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIEL
ARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHVI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf