Trimin1|161513|e_gw1.17.253.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161513
Unique NameTrimin1|161513|e_gw1.17.253.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length343
Homology
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BLAST of jgi.p|Trimin1|161513 vs. uniprot
Match: A0A836CJ38_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ38_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.380e-50
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MGLGCSTDAVDGAAAAGHLDVVRWLSEFRAEGGTRAAXXXXXXXXXXXXXXXXHEGCQWKPECTKNXXXXXXXXXXXDVAATLTPRRRXXXXXXXXXXXXXXXCRQVRFLHERRSEGCTRAAMDRACLHGHLHVAA 136
            MGLGCSTDAVDGAAAAGHLDVVRWLSEFRAEGGTRAAXXXXXXXXXXXXXXXXHEGCQWKPECTKNXXXXXXXXXXXDVAATLTPRRRXXXXXXXXXXXXXXXCRQVRFLHERRSEGCTRAAMDRACLHGHLHVAA
Sbjct:    1 MGLGCSTDAVDGAAAAGHLDVVRWLSEFRAEGGTRAAXXXXXXXXXXXXXXXXHEGCQWKPECTKNXXXXXXXXXXXDVAATLTPRRRXXXXXXXXXXXXXXXCRQVRFLHERRSEGCTRAAMDRACLHGHLHVAA 136
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161513 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CJ38_9STRA1.380e-50100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 285..315
e-value: 17.0
score: 14.4
coord: 229..259
e-value: 1600.0
score: 3.5
coord: 33..63
e-value: 430.0
score: 7.7
coord: 118..148
e-value: 3500.0
score: 1.0
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 264..333
e-value: 7.1E-8
score: 32.9
coord: 13..83
e-value: 3.1E-6
score: 27.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..96
e-value: 1.3E-10
score: 43.0
coord: 105..177
e-value: 7.6E-7
score: 30.6
coord: 179..255
e-value: 6.1E-9
score: 37.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 256..340
e-value: 2.1E-9
score: 39.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 10..84
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 122..333
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 178..336
coord: 3..179
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 3..179
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 178..336
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 107..231
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 107..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:571998..576575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161513mRNA_3387Tribonema minus UTEX_B_3156 mRNAContig_17 571998..576575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161513|e_gw1.17.253.1 ID=Trimin1|161513|e_gw1.17.253.1|Name=jgi.p|Trimin1|161513|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=343bp
MGLGCSTDAVDGAAAAGHLDVVRWLSEFRAEGGTRAAMDYAAAAGHLHVV
RYLHEGCQWKPECTKNAMNWAAAGGHLDVAATLTPRRRRRCRRRRRRRRR
RRRCRQVRFLHERRSEGCTRAAMDRACLHGHLHVAAFLHAHRAEGCTHAA
MLGAAARGHTAVCQWLYAHTALRCSPFGMDKAAQGGHLDLLKWLHARGEA
CTTNAMDYAAAFGELATVLWLHLHRTEGCTASALEWAAINGHLATVRWLH
ANRTEGCTRRAMNGAAGNGHLEVVKFLHFNRREGASRTAMDEAARNGHLE
VVRWLRENRAEGCSERAMQGAAQNGHVDVLAYLQVHVRFKPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf