Trimin1|163380|e_gw1.25.150.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163380
Unique NameTrimin1|163380|e_gw1.25.150.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 8.870e-140
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query:    1 MDVDEDAGESSXXXXXXXXXXXXXXXXEGGGVKLLGIGGRRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            MDVDEDAGESSXXXXXXXXXXXXXXXXEGGGVKLLGIGGRRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV
Sbjct:    1 MDVDEDAGESSXXXXXXXXXXXXXXXXEGGGVKLLGIGGRRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 2.480e-99
Identity = 141/180 (78.33%), Postives = 159/180 (88.33%), Query Frame = 0
Query:   30 GGVKLLGIGGRRTKK-TGKAP-PKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            G + +LGIGGRR K+ + KA   KKTPGEIRIQKDIA+LDGG+VA ITFP+PNNL  F+V V PDSG+WKGASY+FTFTIP  YPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR+NI++F+R V+RTL GC M+G+ F RL+
Sbjct:   43 GKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 222          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK)

HSP 1 Score: 284 bits (726), Expect = 1.760e-94
Identity = 135/208 (64.90%), Postives = 161/208 (77.40%), Query Frame = 0
Query:    1 MDVDEDAGESSXXXXXXXXXXXXXXXXEGGGVKLLGIGGRRTKKTG-KAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            MDV++++                      GGVKLLGIGG++++  G K   K+TPGE+RIQKDIAELDGG VA ITFP+PNNL  FEV VTPD+G W+GA+Y+FTF IP  YPH+PPKV C+TKIYHPNINLQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLN EAAELYRN+  +F+R+VRR+LQG ++  + F RL+
Sbjct:   24 MDVEQESTNGGDAKADDQDESKGGESKSSGGVKLLGIGGKKSRTGGAKKTKKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPKVHCHTKIYHPNINLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNREAAELYRNDARQFERVVRRSLQGYSVGAEQFERLI 231          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC)

HSP 1 Score: 273 bits (697), Expect = 3.110e-90
Identity = 126/178 (70.79%), Postives = 149/178 (83.71%), Query Frame = 0
Query:   32 VKLLGIGGRRTKKTG--KAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            V LLG+GG++  K G  KA  K++PGEIRIQKDIAELDGG VATI FP+ N+L  F V ++PDSGYWKGA+Y+FTFTIP HYPH PPKV C TKIYHPNI+LQG VCLNILREDWKPVLDIN V+YGLIYLFYEPNP+DPLNHEAAEL+R ++ +F+R+V RTL+G  ++G  F RLV
Sbjct:   43 VSLLGVGGKKQTKNGECKATKKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A7S2WHK2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHK2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.740e-89
Identity = 130/172 (75.58%), Postives = 145/172 (84.30%), Query Frame = 0
Query:   36 GIGGRRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            GIGG     TGK   K+TPGEIRIQKDIAELDGGTVAT  FP+ ++L KF V+VTPDSG+WKGA+Y F FTIPG YPH+ PKVLC T+IYHPNINL+GNVCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAA+LYR NIA FQR V+RTL+G  + G  F RLV
Sbjct:   70 GIGGTAVT-TGKKKKKRTPGEIRIQKDIAELDGGTVATHEFPNESDLTKFYVVVTPDSGFWKGATYRFQFTIPGQYPHEAPKVLCQTRIYHPNINLEGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLYRTNIASFQRTVQRTLRGGTIQGVDFERLV 240          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.080e-89
Identity = 124/179 (69.27%), Postives = 151/179 (84.36%), Query Frame = 0
Query:   32 VKLLGIGGRRTKK---TGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            V LLG+GG++ K    +G    K+TPGEIRIQKDIAELDGG VATI FP+PN+L  F+V V PDSGYW+GA+Y+F+F +P HYPH+PPKV C+TKIYHPNI+LQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R ++ +F+R+V RTL+G  ++G  F +LV
Sbjct:   36 VSLLGVGGKKKKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPKVECHTKIYHPNIDLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVNRTLRGGVLDGVQFEKLV 214          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A448YW25_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW25_9STRA)

HSP 1 Score: 270 bits (689), Expect = 4.790e-89
Identity = 127/182 (69.78%), Postives = 146/182 (80.22%), Query Frame = 0
Query:   28 EGGG-VKLLGIGG-RRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            EGGG V L GIGG ++TKK   +  KKTPGEIRIQKDI ELDGG VA +TFP PN+L  F V +TPD+GYWKGA Y F F +P HYPH PPKV C T IYHPNI+LQG VCLNILREDW+PVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R +I  F+R+V RTL+G  ++G  F RLV
Sbjct:   37 EGGGQVSLFGIGGQKKTKKGESSATKKTPGEIRIQKDIGELDGGKVAEVTFPKPNDLTSFNVSITPDTGYWKGARYEFEFKVPAHYPHSPPKVECKTSIYHPNIDLQGKVCLNILREDWRPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDIQSFERLVNRTLRGGTLDGVTFERLV 218          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: K0T069_THAOC (UBC core domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T069_THAOC)

HSP 1 Score: 269 bits (687), Expect = 9.650e-89
Identity = 126/180 (70.00%), Postives = 146/180 (81.11%), Query Frame = 0
Query:   32 VKLLGIGGRRTKKT----GKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            V LLGIGG++ K           K+TPGEIRIQKDIA+LDGG VA I FP+PNNL  FEV +TPDSGYWK A+YNF F IP HYPH PPKV C TKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLI+LFYEPNP+DPLNHEAA+L+R +I +F+R+V+RTL+G  M+G  F RL+
Sbjct:   39 VSLLGIGGKKKKANDGNGASGKKKRTPGEIRIQKDIADLDGGKVANIEFPNPNNLTAFEVSITPDSGYWKNATYNFKFDIPDHYPHTPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIFLFYEPNPDDPLNHEAADLFRRDIRQFERLVQRTLRGGVMDGVHFDRLI 218          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A7R9W2H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2H1_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.420e-88
Identity = 128/179 (71.51%), Postives = 147/179 (82.12%), Query Frame = 0
Query:   32 VKLLGIGGRRTKKTGK---APPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            V +LGIGG++ K  G+   +  K+TPGEIRIQKDIAELDGG VATI FP+PN+L  F V VTPD+G+WKGASY FTF IP HYPH PPKV C TKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R ++ +FQR+V RTL G  ++   F RLV
Sbjct:   83 VSILGIGGKKKKDKGENSSSSKKRTPGEIRIQKDIAELDGGKVATIDFPNPNDLTTFHVRVTPDTGFWKGASYLFTFQIPDHYPHSPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRRDVNQFQRLVSRTLSGGILDNVQFQRLV 261          
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Match: A0A1Z5K9J7_FISSO (Ubiquitin-conjugating enzyme E2 M n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9J7_FISSO)

HSP 1 Score: 268 bits (685), Expect = 1.880e-88
Identity = 127/179 (70.95%), Postives = 150/179 (83.80%), Query Frame = 0
Query:   32 VKLLGIGGRRTKKTGKAP---PKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
            V LLGIGG++  K G++     K+TPGEIRIQ DIAELDGG VATI FP+PN+L  F+V VTPD+G WKGA+Y+FTFTIP HYPH PP+V CNTKIYHPNI+LQG VCLNILREDWKPVLDIN+VIYGLIYLFYEPNP+DPLNHEAAEL+R +  +F+R+V RTL+G  ++G  F RLV
Sbjct:   39 VSLLGIGGKKMVKNGESGMTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGILDGVHFERLV 217          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163380 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZU8_9STRA8.870e-140100.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A6H5JA52_9PHAE2.480e-9978.33UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A6V1TYK4_HETAK1.760e-9464.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G8G3_PHATC3.110e-9070.79Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2WHK2_9STRA1.740e-8975.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3KW38_9STRA2.080e-8969.27Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448YW25_9STRA4.790e-8969.78UBC core domain-containing protein n=1 Tax=Pseudo-... [more]
K0T069_THAOC9.650e-8970.00UBC core domain-containing protein n=2 Tax=Thalass... [more]
A0A7R9W2H1_9STRA1.420e-8871.51Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1Z5K9J7_FISSO1.880e-8870.95Ubiquitin-conjugating enzyme E2 M n=2 Tax=Fistulif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 57..198
e-value: 4.2E-42
score: 155.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availablePANTHERPTHR24068:SF382NEDD8-CONJUGATING ENZYME UBC12-LIKE-RELATEDcoord: 42..196
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 42..196
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 59..191
e-value: 3.2E-37
score: 127.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 54..198
score: 38.796757
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 58..191
e-value: 3.93822E-41
score: 134.637
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 52..207
e-value: 7.8E-46
score: 157.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 47..204
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 125..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:593771..595371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163380mRNA_6670Tribonema minus UTEX_B_3156 mRNAContig_25 593771..595371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163380|e_gw1.25.150.1 ID=Trimin1|163380|e_gw1.25.150.1|Name=jgi.p|Trimin1|163380|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
MDVDEDAGESSAAAAAAPAEEGAGDGGEGGGVKLLGIGGRRTKKTGKAPP
KKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGAS
YNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDI
NAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNG
QVFPRLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS