Trimin1|163245|e_gw1.25.20.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|163245
Unique Name	Trimin1\|163245\|e_gw1.25.20.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	173

Homology

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A836CF92_9STRA (E2F-associated phosphoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF92_9STRA)

HSP 1 Score: 327 bits (837), Expect = 7.020e-113
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0

Query:    1 MTRTLTLAPSCPRRDPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172
            MTRTLTLAPSCPRRDPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS
Sbjct:    1 MTRTLTLAPSCPRRDPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: UPI001C4AB442 (E2F-associated phosphoprotein-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4AB442)

HSP 1 Score: 107 bits (267), Expect = 2.610e-26
Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 0

Query:   15 DPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGG-YGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172
            +PE YD +LDD+DE +V                         H + K Q     SDA LSCPACF ++CL+CQRH RY  QYRAM V N  + TDQ+L                 +G   G P  E  HPV C+ C  E+GVY+ DE +YHFFNVI ++
Sbjct:   35 EPEFYDSNLDDKDEQWV-------------------------HNKRKGQ----TSDAVLSCPACFTTLCLDCQRHERYVTQYRAMFVFNCKIITDQILPQANTKQQRNSKHRKISTGSDEGTPNDEIFHPVCCSVCSTEVGVYDKDE-VYHFFNVIPSN 163

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A8J5F3A8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3A8_ZINOF)

HSP 1 Score: 107 bits (268), Expect = 5.640e-26
Identity = 64/159 (40.25%), Postives = 82/159 (51.57%), Query Frame = 0

Query:   15 DPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGG-YGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172
            +PE YD +LDD+DE +V                         H + K Q     SDA LSCPACF ++CL+CQRH RY  QYRAM V N  + TDQ+L   +             +G   G P  E  HPV C+ C  E+GVY+ DE +YHFFNVI ++
Sbjct:   87 EPEFYDSNLDDKDEQWV-------------------------HNKRKGQ----TSDAVLSCPACFTTLCLDCQRHERYVTQYRAMFVFNCKIITDQILPQAKTKHQRNSKHRKISTGSDEGTPNDEIFHPVCCSVCSTEVGVYDKDE-VYHFFNVIPSN 215

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A8J5FB85_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FB85_ZINOF)

HSP 1 Score: 106 bits (264), Expect = 1.660e-25
Identity = 62/158 (39.24%), Postives = 80/158 (50.63%), Query Frame = 0

Query:   15 DPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGG-YGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIAT 171
            +PE YD +LDD+DE +V                         H + K Q     SDA LSCPACF ++CL+CQRH RY  QYRAM V N  + TDQ+L                 +G   G P  E  HPV C+ C  E+GVY+ DE +YHFFN++ +
Sbjct:   76 EPEFYDSNLDDKDEQWV-------------------------HNKRKGQ----TSDAVLSCPACFTTLCLDCQRHERYVTQYRAMFVFNCKIITDQILPQANTKQQRNSKHRKISTGSDEGTPNDEIFHPVCCSVCSTEVGVYDKDE-VYHFFNILVS 203

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A3Q2NTH8_FUNHE (E2F associated phosphoprotein n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2NTH8_FUNHE)

HSP 1 Score: 107 bits (268), Expect = 3.220e-25
Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = 0

Query:   12 PRRDPELYDKDLDDQDEVFVQAH-YRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVL--------VPRQXXXXXXXXXXXXPSGGYGAPP-----QEALHPVRCAGCGAELGVYEADEELYHFFNVIAT 171
            P  D  LYD D DD+D+ +V A  Y G  +  P            QH + +  PS   SDA L+CPAC  ++CL+CQRH +Y  QYRAM VMN TV+TD+VL         PR+            P+G     P      E  HPV+C+ C  E+ V++ DE +YHFFN++A+
Sbjct:  137 PTNDELLYDPDEDDRDQAWVDARRYNGRKQQDPA--------SRSQHRQSQRLPS---SDAVLNCPACMTTLCLDCQRHEKYRTQYRAMFVMNCTVETDEVLRYKTQQQKTPRKRRRGQNPEGP--PNGATSPMPAGMDSDEIYHPVKCSECSTEVAVFDKDE-VYHFFNILAS 296

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A565CJ00_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CJ00_9BRAS)

HSP 1 Score: 103 bits (258), Expect = 3.240e-25
Identity = 62/154 (40.26%), Postives = 80/154 (51.95%), Query Frame = 0

Query:   16 PELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVI 169
            PELYD DLDD+DE ++                  A++++G+            SDA LSCPACF +VC ECQRH +Y  QYRA+ V+N  VD D+V  P                   G+   E L+PV CA C  E+GV +  EE+YHFFNVI
Sbjct:   23 PELYDSDLDDKDEQWM------------------AKKRDGR-----------TSDAVLSCPACFTTVCYECQRHEQYVTQYRAVFVVNCEVDKDRVFQPNAIPSKVGKRTRDSEKQETGSADNERLNPVFCATCSTEIGVVDI-EEIYHFFNVI 146

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: A0A2I4ECY9_JUGRE (E2F-associated phosphoprotein n=7 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4ECY9_JUGRE)

HSP 1 Score: 103 bits (258), Expect = 4.360e-25
Identity = 59/154 (38.31%), Postives = 75/154 (48.70%), Query Frame = 0

Query:   16 PELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVI 169
            PE YD DLDD+DEV+VQ   +G                               SDA LSCPACF ++CLE QRH +Y  QYRA+ VMN  V++DQV   +                  G    E LH V C+ C  E+G+ + DE +YHFFNV+
Sbjct:   34 PEFYDPDLDDKDEVWVQKRRKGR-----------------------------SSDAVLSCPACFTTLCLESQRHEKYVTQYRAVFVMNCKVNSDQVFAEKHPKPRKGKRGRTSGESESGFSGSETLHEVSCSACSTEVGIIDQDE-VYHFFNVL 157

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: C5XY72_SORBI (Uncharacterized protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C5XY72_SORBI)

HSP 1 Score: 103 bits (257), Expect = 7.410e-25
Identity = 62/159 (38.99%), Postives = 79/159 (49.69%), Query Frame = 0

Query:   15 DPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPS-GGYGAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172
            +PE YD DLDD DE +V    +G                               SDA LSCPACF ++CL+CQRH +Y NQYRAM V N  V TDQ+L   +            P+    G    +A HPV C  C  E+GV++ DE +YHFFNVI ++
Sbjct:   39 EPEFYDPDLDDVDERWVDRQRKGR-----------------------------TSDAVLSCPACFTTLCLDCQRHEKYVNQYRAMFVRNCKVKTDQILREGKSKRKNRKGRAANPTTASEGESKGQAYHPVCCDVCSTEVGVFDEDE-VYHFFNVIPSN 167

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: K3YW75_SETIT (Uncharacterized protein n=5 Tax=Paniceae TaxID=147428 RepID=K3YW75_SETIT)

HSP 1 Score: 102 bits (253), Expect = 2.950e-24
Identity = 61/159 (38.36%), Postives = 80/159 (50.31%), Query Frame = 0

Query:   15 DPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSGGYGAPPQ-EALHPVRCAGCGAELGVYEADEELYHFFNVIATS 172
            +PE YD DLDD DE ++    +G                               SDA LSCPACF ++C++CQRH +Y NQYRAM V N  V TDQ+L   +            PS    A  + +A HPV C  C  E+GV++ DE +YHFFNVI ++
Sbjct:   39 EPEFYDPDLDDVDERWMNRQRKG-----------------------------HTSDAVLSCPACFTTLCVDCQRHEKYVNQYRAMFVRNCKVKTDQILREGKSKRKNRKGKAAEPSTTSEAESKGQAYHPVCCEVCSTEVGVFDEDE-VYHFFNVIPSN 167

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BLAST of jgi.p|Trimin1|163245 vs. uniprot
Match: UPI001863C6D8 (E2F-associated phosphoprotein n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863C6D8)

HSP 1 Score: 104 bits (260), Expect = 4.770e-24
Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 0

Query:   12 PRRDPELYDKDLDDQDEVFVQA---HYRGVPKSKPVPPQRHAQRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAMLVMNVTVDTDQVLVPRQXXXXXXXXXXXXPSG------GY-GAPPQEALHPVRCAGCGAELGVYEADEELYHFFNVIAT 171
            P  D  LYD D DD+D+ +V A    YRG  K          +    + G+ +A P+   SDA L+CPAC  ++CL+CQRH +Y  QYRAM VMN TV+ ++ L  R               G      G+  A P+E  HPVRC+ C  E+ V++ DE +YHFFN++A+
Sbjct:  139 PTNDELLYDPDKDDRDQAWVDAKRTEYRGSRKQ--------LRGSASREGKPQALPN---SDAVLNCPACMTTLCLDCQRHEKYRTQYRAMFVMNCTVNREEALRYRTPADGKWTNRRKRMKGHQQTEPGFVEAEPEETYHPVRCSECSTEVAVFDKDE-VYHFFNILAS 296

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|163245 vs. uniprot

BLAST of jgi.p|Trimin1|163245 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CF92_9STRA	7.020e-113	100.00	E2F-associated phosphoprotein n=1 Tax=Tribonema mi...	[more]
UPI001C4AB442	2.610e-26	40.25	E2F-associated phosphoprotein-like n=2 Tax=Zingibe...	[more]
A0A8J5F3A8_ZINOF	5.640e-26	40.25	Uncharacterized protein n=1 Tax=Zingiber officinal...	[more]
A0A8J5FB85_ZINOF	1.660e-25	39.24	Uncharacterized protein n=1 Tax=Zingiber officinal...	[more]
A0A3Q2NTH8_FUNHE	3.220e-25	39.08	E2F associated phosphoprotein n=2 Tax=Fundulus het...	[more]
A0A565CJ00_9BRAS	3.240e-25	40.26	Uncharacterized protein n=1 Tax=Arabis nemorensis ...	[more]
A0A2I4ECY9_JUGRE	4.360e-25	38.31	E2F-associated phosphoprotein n=7 Tax=Juglandaceae...	[more]
C5XY72_SORBI	7.410e-25	38.99	Uncharacterized protein n=1 Tax=Sorghum bicolor Ta...	[more]
K3YW75_SETIT	2.950e-24	38.36	Uncharacterized protein n=5 Tax=Paniceae TaxID=147...	[more]
UPI001863C6D8	4.770e-24	38.82	E2F-associated phosphoprotein n=1 Tax=Megalops cyp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019370	E2F-associated phosphoprotein	PFAM	PF10238	Eapp_C	coord: 18..170 e-value: 1.3E-37 score: 129.2
IPR019370	E2F-associated phosphoprotein	PANTHER	PTHR15967	UNCHARACTERIZED	coord: 15..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_25	contig	Contig_25:221144..221662 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|163245	mRNA_6616	Tribonema minus UTEX_B_3156	mRNA	Contig_25 221144..221662 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|163245|e_gw1.25.20.1 ID=Trimin1|163245|e_gw1.25.20.1|Name=jgi.p|Trimin1|163245|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=173bp
MTRTLTLAPSCPRRDPELYDKDLDDQDEVFVQAHYRGVPKSKPVPPQRHA
QRQEGQHGEDKAQPSRFKSDAHLSCPACFDSVCLECQRHARYANQYRAML
VMNVTVDTDQVLVPRQQQQQQQQQQRQQPSGGYGAPPQEALHPVRCAGCG
AELGVYEADEELYHFFNVIATS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019370	E2F-assoc_phosphoprotein