Trimin1|163180|e_gw1.24.64.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163180
Unique NameTrimin1|163180|e_gw1.24.64.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length498
Homology
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BLAST of jgi.p|Trimin1|163180 vs. uniprot
Match: A0A836CGP9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGP9_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.390e-59
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 
Query:    1 PPHPWSATTIRNLAEVFKAQGKLAGAETLYHRALVLDEALLGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPDTVKTRHHLNSMIGELYYRREHISRRAARRVDAALGAENPSTAPMLATLGDFLHQQGKLVEAELLYRRVVMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALGADAHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTSLPMVTTLHR 303
            PPHPWSATTIRNLAEVFKAQGKLAGAETLYHRALVLDEALLGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPDTVKTRHHLNSMIGELYYRREHISRRAARRVDAALGAENPSTAPMLATLGDFLHQQGKLVEAELLYRRVVMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALGADAHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTSLPMVTTLHR
Sbjct:    1 PPHPWSATTIRNLAEVFKAQGKLAGAETLYHRALVLDEALLGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPDTVKTRHHLNSMIGELYYRREHISRRAARRVDAALGAENPSTAPMLATLGDFLHQQGKLVEAELLYRRVVMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALGADAHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTSLPMVTTLHR 303
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163180 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CGP9_9STRA2.390e-59100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 173..206
e-value: 58.0
score: 8.3
coord: 340..373
e-value: 0.0036
score: 26.5
coord: 298..331
e-value: 310.0
score: 1.8
coord: 7..40
e-value: 0.49
score: 19.4
coord: 215..248
e-value: 340.0
score: 1.5
coord: 382..415
e-value: 100.0
score: 6.1
coord: 91..124
e-value: 64.0
score: 7.9
coord: 424..457
e-value: 29.0
score: 10.9
coord: 49..82
e-value: 15.0
score: 13.5
coord: 256..289
e-value: 31.0
score: 10.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 340..373
score: 8.6439
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..152
e-value: 2.3E-42
score: 147.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 153..327
e-value: 8.2E-37
score: 128.8
coord: 328..494
e-value: 2.1E-44
score: 153.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 337..471
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..120
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 167..286
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 248..378
NoneNo IPR availablePFAMPF13374TPR_10coord: 90..127
e-value: 5.5E-4
score: 19.7
coord: 256..293
e-value: 0.0038
score: 17.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 299..372
e-value: 4.0E-13
score: 49.5
coord: 173..246
e-value: 5.0E-12
score: 45.9
coord: 7..78
e-value: 1.6E-16
score: 60.4
coord: 381..451
e-value: 2.0E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 3..141
coord: 161..254
coord: 254..367
coord: 339..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_24contigContig_24:190622..196685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163180mRNA_7474Tribonema minus UTEX_B_3156 mRNAContig_24 190622..196685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163180|e_gw1.24.64.1 ID=Trimin1|163180|e_gw1.24.64.1|Name=jgi.p|Trimin1|163180|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=498bp
PPHPWSATTIRNLAEVFKAQGKLAGAETLYHRALVLDEALLGAKHPSTAT
TLHDLAGVLEGRGKLAEAEAQYRRALAIEEAALGPEHWSTATVVASLARV
LHAQGYLAEAEPLYRRALVVQEAQLGPQAPDTVKTRHHLNSMIGELYYRR
EHISRRAARRVDAALGAENPSTAPMLATLGDFLHQQGKLVEAELLYRRVV
MITESTQGLNHPATATALDSLAEILVAQDKQAEAELLFRRELAIVETALG
ADAHTATVVARLATHLHVQGKLAEAEPLYRRSLALEHSALGHTSLPMVTT
LHRFAELLKACGKLLQAEQVYVRSLSIEQAALGPPLPWTATTLNNLAEVL
TAQGKLSEAEGVYHRALALDESLLGAWHASTATTLHRYADVVQAQGRLAE
AEPLYRRSLAIEEAVLGPDHISTATVLASLARLLLIQRKIPEASSLFSRA
LVIQEAALGPEHPATATTRHNVHVLEAHAQQAGAELFYPHLFKRLRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf