Trimin1|163122|e_gw1.24.27.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163122
Unique NameTrimin1|163122|e_gw1.24.27.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.220e-98
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query:    1 VVLPEVQDAMAEQGRALLSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
            VVLPEVQDAMAEQGRALLSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ
Sbjct:    1 VVLPEVQDAMAEQGRALLSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.890e-29
Identity = 75/213 (35.21%), Postives = 100/213 (46.95%), Query Frame = 0
Query:    1 VVLPEVQDAMAEQGRALLSSTDA------WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
            ++LPEVQ+AM       L           WLTP LL KI+ +P LAA L  PRF++A+ELM   P+ A+ +F   A+AR  FTEL+ LL  HF  +G    + A                                                  A V ++L    LRELL+DPGMQ VLQEC  P  L  Y  HPE+GPK++ +A+AGL+  +
Sbjct:  147 LLLPEVQEAMKHSASNPLGGASGGGGGQEWLTPELLQKISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAATPAT-----------AEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISFR 348          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A7S2RZ79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ79_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.420e-24
Identity = 69/209 (33.01%), Postives = 95/209 (45.45%), Query Frame = 0
Query:    1 VVLPEVQDAMAEQGRAL--LSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
            +VL EVQDAM   G  +  +    AW+T  L++K A  P LA  L  PR+T A++ ++ +P+ AM  F  D +  A   E    +G HF +LG Q                                                      DA V RI+ D  LRELL+D G+Q V+ EC  PG+L+ Y     WGPK+R+LA AGLV+I+
Sbjct:  192 LVLDEVQDAMKSAGGGMGQMLQDGAWMTEDLMTKFAKNPLLAKGLSDPRYTAAIQELQKNPKQAMEKFQHDPELSAFLNEFCQTMGEHFTKLGDQQQPPVDPATAAVHGPLAEDAVRRASERAKQSPSPPPQPSKEE------------DAQVQRIMQDTELRELLMDSGLQRVMMECQQPGKLQMYMRDKTWGPKLRKLADAGLVRIE 388          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A6G0XYI5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYI5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.320e-21
Identity = 63/183 (34.43%), Postives = 81/183 (44.26%), Query Frame = 0
Query:   24 WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQI 206
            W+TP L  K+A  P L+ ALQ+PRFT A++ M  +P AAM  +  D D   +F + +  +G HFE LG    +                                                   DA V RILAD  L ++L DP MQ VL  C  P  LR Y     +GPKIR+LA AGLVQ+
Sbjct:  116 WMTPDLFEKLAKDPKLSQALQNPRFTAAIQEMSTNPTAAMLKYQNDPDVGVMFKDFMNFMGHHFEHLGKIEEEKERKSREEIQRDALKSMSTSPEE----------------------------DAQVQRILADPELMDILGDPAMQQVLHACQKPCALRSYMNDAIYGPKIRKLADAGLVQL 270          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A485KXP1_9STRA (Aste57867_13157 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXP1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.420e-20
Identity = 69/205 (33.66%), Postives = 90/205 (43.90%), Query Frame = 0
Query:    3 LPEVQDAMAEQGRALLSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQEC-SAPGRLRHYAAHPEWGPKIRRLAQAGLVQI 206
            LP+VQ AMAE         D W+TPA   K+A  P L  AL++PRFT A++ M  +P AA+  +  DAD   +F + L  LG HFE+L                                                         +A V RIL D  L+ +L DP M+ VL+ C S PG L  Y     +GPKI +LA AGLVQ+
Sbjct:  106 LPDVQAAMAEMQNL---KPDDWMTPAFFEKVAQNPKLCQALKNPRFTAAIQEMATNPTAAIEKYQKDADFGVMFQDFLQFLGHHFEQLAEDEKSLPPPRSMEDIQRHALETMSRTPNE---------------------------EAQVQRILRDPELQAILGDPAMRDVLETCQSQPGALATYMQDCVFGPKICKLAAAGLVQL 280          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A7S2EKF9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKF9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.440e-18
Identity = 84/225 (37.33%), Postives = 115/225 (51.11%), Query Frame = 0
Query:    1 VVLPEVQDAMAEQGRA-LLSSTDAWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------------AADAD---VARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQI 206
            ++  E+QDAM       + +++ +W TP L+ KI+  P L A L +P+F  ALE ++ +PR AM  F    +      E  G+LG HF +LG +  +  XXXXXXXXXXXXXXXXXXX                                            A  D   V  ILA+  L +LL+D   Q ++QECS PGR++ Y  HPE GPK+R+L QAGL+Q+
Sbjct:   90 LIFEEIQDAMKNTPSFDINNASGSWATPDLMEKISKNPRLLAGLSNPKFAAALEALQKNPRMAMKKFQNHPEIMDYLHEFCGVLGEHFTKLGEEQEKXXXXXXXXXXXXXXXXXXXXXSISSRSKKNIGPIAEKVLKKHATNQTTXXXXXXXXXXXXXXXXTARKDKEKVDSILANRELVDLLMDAEFQNIMQECSIPGRMQMYMQHPEHGPKLRKLLQAGLLQV 314          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A7S2C8H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C8H1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.150e-18
Identity = 66/228 (28.95%), Postives = 96/228 (42.11%), Query Frame = 0
Query:    5 EVQDAMAEQGRALLSSTDA--WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADA--RALFTELLGLLGTHFEELGAQT--------------------SQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAA-DADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
            EVQ+AMA     +        W+TP L+  +A+ P LA  +Q+P +  AL  ++ DP+AAM       D   ++   E  G++G HF  LG Q                     + A                                                AA DA V  ++ ++ LRELL+D  MQ ++Q+C  PG L+HY   P WGPK+R+LA AGLV+I+
Sbjct:   31 EVQEAMAASVGPMEKELGKGEWVTPDLMQTLASNPRLATGMQNPYYMAALAELQKDPKAAMEKIQKQKDPGLKSFLEEFCGVMGQHFTALGTQQXXXXXXXXXXXXXXXXXPNIAPAGPATTPSQPPPSPGTQGPLAEAAMKKYMENAKKAAESGTAAPPMPPPNAAEDAKVDLVMRNQELRELLMDREMQEIMQKCGHPGALQHYMTDPTWGPKLRKLADAGLVRIE 258          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.240e-15
Identity = 56/183 (30.60%), Postives = 76/183 (41.53%), Query Frame = 0
Query:   24 WLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQI 206
            W+TPA   K+   P L  A+++PRFT A++ M  +P AA+  +  D D   +F + L  +G HFEELG    + A                                                 DA V RILAD  L           VL+ C  PG L  Y     +GPKI++LA+AGLVQ+
Sbjct:  122 WMTPAFFEKLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKIEEKTAIPTRDDIQRQALTSMSRSPEE----------------------------DAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLVQL 276          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: B8LEM9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEM9_THAPS)

HSP 1 Score: 78.6 bits (192), Expect = 1.890e-13
Identity = 62/229 (27.07%), Postives = 94/229 (41.05%), Query Frame = 0
Query:    1 VVLPEVQDAMAEQGRALLSSTDAWLTPALLSKIAAR-PALAAALQSPRFTRALELMRDDPRAAMALF----------GGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----------AADADVARILADEGLRELLVDPGMQTVLQEC-SAPGRLRHYAAHPEWGPKIRRLAQAGLVQI 206
            ++L EVQ  MA     L ++T  W TP+LL+ I+   P L   + +P+F   L  M+ +P+  +             G +        E  G+LG HF  LG +  + A                                                          A D  VA ILA++ LR +L+DP MQ ++QEC S  G+L +Y  H E+GPK+R+L +AGL++ 
Sbjct:  257 LLLHEVQSTMATH---LQNTTSEWATPSLLAHISENHPNLERGMNNPKFMAVLHGMQSNPKETLERLQRENDGDNGDGSNEGVLEFVKEFCGVLGEHFVRLGEEEEEKAQQQKQNLQWSEPKVRELGPLEEKALHTHKIEQEKQRKEQSTTITKSASTPSNTTQTTNAMDDQVASILANDDLRSILLDPKMQQIMQECTSQDGKLHYYMRHEEYGPKLRKLMEAGLLKF 482          
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Match: A0A7S2FPN2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPN2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.930e-12
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  151 VARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
            V +++ DE +R LL+DP MQ V+  C  PG L+ Y   P WGP+IR+LAQ+GLVQIQ
Sbjct:   55 VDKVMQDEEMRALLMDPEMQQVMITCQQPGALQKYMVDPLWGPRIRKLAQSGLVQIQ 111          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163122 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A835Z085_9STRA1.220e-98100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LC77_ECTSI1.890e-2935.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RZ79_9STRA1.420e-2433.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0XYI5_9STRA1.320e-2134.43Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KXP1_9STRA4.420e-2033.66Aste57867_13157 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2EKF9_9STRA1.440e-1837.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2C8H1_9STRA3.150e-1828.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W4GNU8_9STRA2.240e-1530.60Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
B8LEM9_THAPS1.890e-1327.07Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2FPN2_9STRA1.930e-1254.39Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.260.100coord: 28..85
e-value: 1.6E-6
score: 29.9
NoneNo IPR availableGENE3D1.10.260.100coord: 147..207
e-value: 2.2E-7
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_24contigContig_24:653318..655580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163122mRNA_7526Tribonema minus UTEX_B_3156 mRNAContig_24 653318..655580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163122|e_gw1.24.27.1 ID=Trimin1|163122|e_gw1.24.27.1|Name=jgi.p|Trimin1|163122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
VVLPEVQDAMAEQGRALLSSTDAWLTPALLSKIAARPALAAALQSPRFTR
ALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAPP
PDPAAAAAAAAAAEAAAQGPLAQAALRRHAEAATSNGGSSGGSSGAADAD
VARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQ
AGLVQIQ*
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