Trimin1|162753|e_gw1.22.76.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162753
Unique NameTrimin1|162753|e_gw1.22.76.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length339
Homology
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BLAST of jgi.p|Trimin1|162753 vs. uniprot
Match: A0A835Z1T8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1T8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.480e-24
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 
Query:    1 MLRAVLRATDSGPQRDALTLVKSVYHPTDAASLPACTVDLPALESLDLSHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNLMHLRMLTLEELPIETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITDTEALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDVVTATAEALAAVNLAIEAVSNR 338
            MLRAVLRATDSGPQRDALTLVKSVYHPTDAASLPACTVDLPALESLDLSHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNLMHLRMLTLEELPIETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITDTEALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDVVTATAEALAAVNLAIEAVSNR
Sbjct:    1 MLRAVLRATDSGPQRDALTLVKSVYHPTDAASLPACTVDLPALESLDLSHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNLMHLRMLTLEELPIETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITDTEALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDVVTATAEALAAVNLAIEAVSNR 338
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162753 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1T8_9STRA4.480e-24100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 27..142
e-value: 3.3E-27
score: 96.8
coord: 143..324
e-value: 7.7E-42
score: 144.9
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 173..314
coord: 76..268
NoneNo IPR availablePANTHERPTHR48051:SF1S-CELL ENRICHED WITH LEUCINE-RICH REPEAT-CONTAINING PROTEIN SLRA-RELATEDcoord: 173..314
coord: 76..268
NoneNo IPR availablePANTHERPTHR48051:SF1S-CELL ENRICHED WITH LEUCINE-RICH REPEAT-CONTAINING PROTEIN SLRA-RELATEDcoord: 32..213
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 32..213
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 32..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:973234..974250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162753mRNA_6422Tribonema minus UTEX_B_3156 mRNAContig_22 973234..974250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162753|e_gw1.22.76.1 ID=Trimin1|162753|e_gw1.22.76.1|Name=jgi.p|Trimin1|162753|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=339bp
MLRAVLRATDSGPQRDALTLVKSVYHPTDAASLPACTVDLPALESLDLSH
CTELETLPCSIGNLTMLTLLDLTNCNSLMHLPASIGNLTALESLSLRGCD
KISRLPDTIGALASLETLTVSCCSDMAILPACLGDLAALTWLSISMCGTL
TALPDSICNLMHLRMLTLEELPIETLPQSIGRLTALQVLEVERCDAFRSL
PDSIGGLQSLAHLTITDTEALVALPDTLCSLSALITLELSRCTQLTALPN
RVGDMQALEYIDLEDCELLAALPDSMGNLQLLKRLYIVNCHQLTELPRAL
LQLNRLTRIDAEGCQDVVTATAEALAAVNLAIEAVSNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf