Trimin1|162702|e_gw1.22.146.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162702
Unique NameTrimin1|162702|e_gw1.22.146.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length120
Homology
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: A0A835ZAF2_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF2_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.860e-81
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query:    1 MPQLPSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            MPQLPSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT
Sbjct:    1 MPQLPSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: UPI0014194B5D (DNA polymerase iota isoform X3 n=1 Tax=Lacerta agilis TaxID=80427 RepID=UPI0014194B5D)

HSP 1 Score: 134 bits (338), Expect = 1.850e-35
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 0
Query:    6 SREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            S   S  R I+H+D+D FYAQVE++ +P LRGRP+GVQQKYLMVTCNY AR AGVKK  +V  A + CPEL++ NGE LTKYRE S +  ALL   +  P VERL LDE ++D+T
Sbjct:   41 SAGSSLHRIIVHLDLDCFYAQVEMICNPELRGRPLGVQQKYLMVTCNYEARNAGVKKCMSVKEAKEKCPELVLVNGEDLTKYREMSYKFTALL--EEFTPLVERLGLDENFVDIT 153          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: A0A8B7ZRY7_ACAPL (DNA polymerase iota-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZRY7_ACAPL)

HSP 1 Score: 135 bits (341), Expect = 1.140e-34
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 0
Query:    5 PSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            P+ + SH R I+HIDID FYAQVE++ +P+LR +P+G+QQKYL+VTCNY+AR+ GV K+  +T ALQ CPEL++ +GE LT YRE S R+  LL     +P VERL  DE ++DV+
Sbjct:   39 PNMKVSHSRTIVHIDIDCFYAQVEMVRNPALRTKPLGIQQKYLLVTCNYIARSRGVTKLMRITDALQRCPELVIVSGEDLTHYREMSYRITELL--RQFSPTVERLGFDENFIDVS 152          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: UPI000A2A9CB6 (DNA polymerase iota n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9CB6)

HSP 1 Score: 134 bits (338), Expect = 1.860e-34
Identity = 64/112 (57.14%), Postives = 86/112 (76.79%), Query Frame = 0
Query:    9 ESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            + H R IIHIDID FYAQVE+LL+P L+ +P+G+QQK+++VTCNYVAR  G+ K+  ++ A + CP+L++ NGE LTKYR+ S+RV  LLLG  + P VERL  DE +LDVT
Sbjct:   80 KGHERTIIHIDIDCFYAQVEMLLNPYLQNKPLGIQQKHIVVTCNYVARERGLTKLMRISDAKKKCPDLVLVNGEDLTKYRDFSKRVNDLLLG--ITPXVERLGFDENFLDVT 189          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: UPI0018D9001A (DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A)

HSP 1 Score: 134 bits (337), Expect = 4.140e-34
Identity = 64/111 (57.66%), Postives = 84/111 (75.68%), Query Frame = 0
Query:   10 SHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            SH R IIHID+D +YAQVE++ +P+LR +P+G+QQKYL+VTCNYVARA GV K+  +T ALQ CP+L++ NGE LT YRE S R+  LL     +P VERL  DE ++DV+
Sbjct:   79 SHTRTIIHIDLDCYYAQVEMVRNPALRTKPLGIQQKYLLVTCNYVARARGVTKLMRITDALQRCPDLVIVNGEDLTHYREMSYRITELL--QQFSPLVERLGFDENFIDVS 187          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: A0A8J2WRK3_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WRK3_9CRUS)

HSP 1 Score: 132 bits (331), Expect = 8.460e-34
Identity = 61/112 (54.46%), Postives = 86/112 (76.79%), Query Frame = 0
Query:    9 ESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            E H R IIHIDID FYAQVE++L+PSLRG+P+G++QK ++VTCNY ARA GV+K+ ++  AL+ CP L++ NGE L KYR+ SE++  +L     +P VE+L LDE ++D+T
Sbjct:   21 EKHDRVIIHIDIDCFYAQVEMILNPSLRGKPLGIKQKNIVVTCNYEARALGVEKLMSIKTALEKCPSLVLANGEDLKKYRDMSEKIYQIL--QSFSPFVEKLGLDENFIDIT 130          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: UPI0003318DBD (DNA polymerase iota n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003318DBD)

HSP 1 Score: 132 bits (333), Expect = 1.230e-33
Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    8 EESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            E+S  R I+H+D+D FYAQVE++L+P L+G+P+GVQQKYL+VTCNY AR  GVKK+ +V  A + CP+L++ NGE LT+YRE S +V  LL   + +P VERL  DE ++DVT
Sbjct:   11 EDSSSRVIVHVDLDCFYAQVEMILNPELKGKPLGVQQKYLVVTCNYEARKLGVKKVMSVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELL--EEFSPIVERLGFDENFVDVT 121          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: A0A670IWK2_PODMU (DNA polymerase iota n=6 Tax=Lacertinae TaxID=162266 RepID=A0A670IWK2_PODMU)

HSP 1 Score: 132 bits (333), Expect = 1.270e-33
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 0
Query:    3 QLPSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            ++ S   S  R I+H+D+D FYAQVE++ +P LR +P+GVQQKYLMVTCNY AR AGVKK  +V  A + CPEL++ NGE LTKYRE S +  ALL   +  P VERL LDE ++D+T
Sbjct:   38 KVASAGSSQHRIIVHLDLDCFYAQVEMICNPELRSKPLGVQQKYLMVTCNYEARNAGVKKCMSVKEAKEKCPELVLVNGEDLTKYREMSYKFTALL--EEFTPLVERLGLDENFVDIT 153          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: A0A8D0HQF3_SPHPU (DNA polymerase iota n=2 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HQF3_SPHPU)

HSP 1 Score: 125 bits (315), Expect = 3.400e-33
Identity = 62/108 (57.41%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   13 RAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            R I+H D+D FYAQVE+L +P LRG+P+ VQQKYL+VTCNY AR  GVKK+ +V  A + CP+L++ NGE LTKYRE S +V ALL   + +P VERL  DE ++D+T
Sbjct:   54 RVIVHTDLDCFYAQVEMLHNPELRGKPLCVQQKYLVVTCNYEARELGVKKLMSVKEANEKCPQLVLVNGEDLTKYREMSYKVTALL--EEFSPLVERLGFDENFVDIT 159          
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Match: UPI0018867B76 (DNA polymerase iota isoform X4 n=1 Tax=Falco rusticolus TaxID=120794 RepID=UPI0018867B76)

HSP 1 Score: 128 bits (322), Expect = 4.080e-33
Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    6 SREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLGADVAPCVERLNLDECWLDVT 120
            S   + RR I+HID+D FYAQVE++ +P LR +P+GVQQKY++VTCNY AR  GVKK+ +V  A + CP+LI+ NGE LT YRE S +V  LL   +  P VERL  DE ++D+T
Sbjct:   37 SARSTARRVIVHIDLDCFYAQVEIIRNPELRDKPLGVQQKYIVVTCNYAARKLGVKKLMSVKDAKEKCPQLILVNGEDLTPYREMSYKVTELL--GEFCPLVERLGFDENFVDIT 149          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162702 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAF2_9STRA4.860e-81100.00UmuC domain-containing protein n=1 Tax=Tribonema m... [more]
UPI0014194B5D1.850e-3559.13DNA polymerase iota isoform X3 n=1 Tax=Lacerta agi... [more]
A0A8B7ZRY7_ACAPL1.140e-3455.17DNA polymerase iota-like isoform X1 n=2 Tax=Acanth... [more]
UPI000A2A9CB61.860e-3457.14DNA polymerase iota n=1 Tax=Exaiptasia diaphana Ta... [more]
UPI0018D9001A4.140e-3457.66DNA polymerase iota-like isoform X1 n=3 Tax=Patiri... [more]
A0A8J2WRK3_9CRUS8.460e-3454.46Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
UPI0003318DBD1.230e-3355.75DNA polymerase iota n=1 Tax=Sorex araneus TaxID=42... [more]
A0A670IWK2_PODMU1.270e-3355.93DNA polymerase iota n=6 Tax=Lacertinae TaxID=16226... [more]
A0A8D0HQF3_SPHPU3.400e-3357.41DNA polymerase iota n=2 Tax=Sphenodon punctatus Ta... [more]
UPI0018867B764.080e-3353.91DNA polymerase iota isoform X4 n=1 Tax=Falco rusti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001126UmuC domainPFAMPF00817IMScoord: 18..120
e-value: 1.3E-26
score: 93.4
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 15..120
score: 26.569962
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 80..120
e-value: 4.7E-6
score: 28.9
NoneNo IPR availableGENE3D3.40.1170.60coord: 22..79
e-value: 2.4E-19
score: 70.7
NoneNo IPR availablePANTHERPTHR46404DNA POLYMERASE IOTAcoord: 4..120
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 8..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:397561..398528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162702mRNA_6363Tribonema minus UTEX_B_3156 mRNAContig_22 397561..398528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162702|e_gw1.22.146.1 ID=Trimin1|162702|e_gw1.22.146.1|Name=jgi.p|Trimin1|162702|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=120bp
MPQLPSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVT
CNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERVQALLLG
ADVAPCVERLNLDECWLDVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf