Trimin1|162677|e_gw1.22.44.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162677
Unique NameTrimin1|162677|e_gw1.22.44.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length110
Homology
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A836CG73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG73_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.730e-73
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVYQHACACLRVRAAPRHGRARRLPAMAVAGALAHHGARGHHRRCGTPPPEHAEALPRCVARWARARRRQWRRRQWHA 109
            PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVYQHACACLRVRAAPRHGRARRLPAMAVAGALAHHGARGHHRRCGTPPPEHAEALPRCVARWARARRRQWRRRQWHA
Sbjct:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVYQHACACLRVRAAPRHGRARRLPAMAVAGALAHHGARGHHRRCGTPPPEHAEALPRCVARWARARRRQWRRRQWHA 109          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: V7CDI0_PHAVU (Uncharacterized protein (Fragment) n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CDI0_PHAVU)

HSP 1 Score: 60.8 bits (146), Expect = 4.400e-10
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   21 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 54          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: T2FEK3_9BRAS (PsbC (Fragment) n=1 Tax=Lepidium draba TaxID=153317 RepID=T2FEK3_9BRAS)

HSP 1 Score: 60.8 bits (146), Expect = 6.520e-10
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   40 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 73          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A453M4Z7_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453M4Z7_AEGTS)

HSP 1 Score: 60.8 bits (146), Expect = 7.530e-10
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   16 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 49          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A8D5WEI4_9PHAE (Photosystem II CP43 apoprotein (Fragment) n=1 Tax=Porterinema fluviatile TaxID=246123 RepID=A0A8D5WEI4_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 9.800e-10
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANVASAQGPT L  Y
Sbjct:   59 PEASQAQAFTFLVRDQRLGANVASAQGPTGLGKY 92          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A2K2DL66_BRADI (Uncharacterized protein (Fragment) n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2DL66_BRADI)

HSP 1 Score: 60.8 bits (146), Expect = 1.280e-9
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   37 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 70          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A3P6DE01_BRACM (Uncharacterized protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A3P6DE01_BRACM)

HSP 1 Score: 60.8 bits (146), Expect = 1.730e-9
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   70 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 103          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: Q9G2C4_9CHLO (Photosystem II CP43 apoprotein (Fragment) n=3 Tax=Chlamydomonadales TaxID=3042 RepID=Q9G2C4_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 1.830e-9
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQ+QAFTFLVRDQRLGANVASAQGPT L  Y
Sbjct:  114 PEASQSQAFTFLVRDQRLGANVASAQGPTGLGKY 147          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: A0A4V6T3X7_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4V6T3X7_MUSBA)

HSP 1 Score: 60.8 bits (146), Expect = 2.000e-9
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   54 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 87          
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Match: UPI0018F814CA (photosystem II CP43 reaction center protein-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F814CA)

HSP 1 Score: 60.8 bits (146), Expect = 2.210e-9
Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVY 34
            PEASQAQAFTFLVRDQRLGANV SAQGPT L  Y
Sbjct:   35 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 68          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162677 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG73_9STRA2.730e-73100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
V7CDI0_PHAVU4.400e-1088.24Uncharacterized protein (Fragment) n=1 Tax=Phaseol... [more]
T2FEK3_9BRAS6.520e-1088.24PsbC (Fragment) n=1 Tax=Lepidium draba TaxID=15331... [more]
A0A453M4Z7_AEGTS7.530e-1088.24Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A8D5WEI4_9PHAE9.800e-1091.18Photosystem II CP43 apoprotein (Fragment) n=1 Tax=... [more]
A0A2K2DL66_BRADI1.280e-988.24Uncharacterized protein (Fragment) n=1 Tax=Brachyp... [more]
A0A3P6DE01_BRACM1.730e-988.24Uncharacterized protein n=1 Tax=Brassica campestri... [more]
Q9G2C4_9CHLO1.830e-988.24Photosystem II CP43 apoprotein (Fragment) n=3 Tax=... [more]
A0A4V6T3X7_MUSBA2.000e-988.24Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
UPI0018F814CA2.210e-988.24photosystem II CP43 reaction center protein-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044900Photosystem II CP43 reaction centre protein superfamilyGENE3D1.10.10.670photosystem ii from thermosynechococcus elongatuscoord: 1..43
e-value: 4.6E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR33180:SF16PHOTOSYSTEM II CP43 REACTION CENTER PROTEINcoord: 1..36
IPR000932Photosystem antenna protein-likePANTHERPTHR33180PHOTOSYSTEM II CP43 REACTION CENTER PROTEINcoord: 1..36
IPR036001Photosystem antenna protein-like superfamilySUPERFAMILY161077Photosystem II antenna protein-likecoord: 2..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1028696..1029025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162677mRNA_6431Tribonema minus UTEX_B_3156 mRNAContig_22 1028696..1029025 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162677|e_gw1.22.44.1 ID=Trimin1|162677|e_gw1.22.44.1|Name=jgi.p|Trimin1|162677|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=110bp
PEASQAQAFTFLVRDQRLGANVASAQGPTNLNVYQHACACLRVRAAPRHG
RARRLPAMAVAGALAHHGARGHHRRCGTPPPEHAEALPRCVARWARARRR
QWRRRQWHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044900PSII_PsbC_sf
IPR000932PS_antenna-like
IPR036001PS_II_antenna-like_sf