Trimin1|162554|e_gw1.21.171.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162554
Unique NameTrimin1|162554|e_gw1.21.171.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length241
Homology
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BLAST of jgi.p|Trimin1|162554 vs. uniprot
Match: A0A835Z288_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z288_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 3.740e-171
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 
Query:    1 MQIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYARMLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAAPTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCSGCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLPDHVEGVFARRRDLYGASKARAGGPEAVLARLLGKPGEALKR 240
            MQIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYARMLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAAPTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCSGCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLPDHVEGVFARRRDLYGASKARAGGPEAVLARLLGKPGEALKR
Sbjct:    1 MQIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYARMLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAAPTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCSGCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLPDHVEGVFARRRDLYGASKARAGGPEAVLARLLGKPGEALKR 240
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BLAST of jgi.p|Trimin1|162554 vs. uniprot
Match: D8LF60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF60_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.890e-28
Identity = 84/238 (35.29%), Postives = 115/238 (48.32%), Query Frame = 0 
Query:    1 MQIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYARMLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAAPTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCSGCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLPDHVEGVFA----RRRDLYGASKA-------RAGGPEAVL 227
            +Q+  G  + S   P+   + Q  CLL       P   C  Y RS+RYA M+ VWRSY YLS   ++YY     +E+DG CCGFG P  C  DAR FP+  +  Q+ +G    +D RYVCGAE G     Y   Q +D      V+ G  GC  E++  M  ++   A  I+ L  +  A +    C+  KR   D +PDHV+        + +DL G +K        R GGP A L
Sbjct:   12 IQLTLGGTMYSRTLPEYDESFQLDCLLKEPVVNSPDD-CLGYIRSDRYAGMMLVWRSYVYLSLDYTKYYQRLVTIEQDGVCCGFGPPTRCTGDARDFPSYFSENQVGFG----TDRRYVCGAEIGGCKYDYPMGQCMDIDV--DVLEGARGCAFELEMHMTNKVIVHAFFIMGLSALMFASMLSGCCMFWKRAYDDSMPDHVDSHVPWDPFKNKDLLGENKGTKSKRAGREGGPAATL 242
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162554 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z288_9STRA3.740e-171100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LF60_ECTSI1.890e-2835.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:976348..978970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162554mRNA_7212Tribonema minus UTEX_B_3156 mRNAContig_21 976348..978970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162554|e_gw1.21.171.1 ID=Trimin1|162554|e_gw1.21.171.1|Name=jgi.p|Trimin1|162554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=241bp
MQIASGLALRSHIAPDVPYAQQRSCLLARSATAPPTTACAAYARSERYAR
MLDVWRSYNYLSAGASRYYALAAHMEEDGDCCGFGAPRGCVPDARAFPAA
PTRGQLHWGGDYESDARYVCGAEPGWYGETYYCSQSVDESALEPVVGGCS
GCGAEVDAAMARRITGDARAIVALGIVYAAGLAVAVCLAAKRPALDVLPD
HVEGVFARRRDLYGASKARAGGPEAVLARLLGKPGEALKR*
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