Trimin1|162256|e_gw1.20.266.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162256
Unique NameTrimin1|162256|e_gw1.20.266.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length152
Homology
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A835Z5Q9_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q9_9STRA)

HSP 1 Score: 311 bits (797), Expect = 1.810e-107
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query:    1 MGTWALQVAHNAITVYVCITVYVSATKCDFPTTGALAATTCSEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQRARGKATKAAP 151
            MGTWALQVAHNAITVYVCITVYVSATKCDFPTTGALAATTCSEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQRARGKATKAAP
Sbjct:    1 MGTWALQVAHNAITVYVCITVYVSATKCDFPTTGALAATTCSEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQRARGKATKAAP 151          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A835YKU0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU0_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.840e-47
Identity = 85/119 (71.43%), Postives = 89/119 (74.79%), Query Frame = 0
Query:   33 TGALAATTCSEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQRARGKATKAAP 151
            T +  A T SEEEDGILR H R HG RKW+  A SLG    RRTA AC  RW+ QLDPTINK PWTQQEEAVLA AYQQLG G W EIAKLLPGRT+ QV NRIRNA  AR KATKAAP
Sbjct:    2 TASERANTWSEEEDGILREHARLHGTRKWDLVADSLGP---RRTAKACGQRWYCQLDPTINKGPWTQQEEAVLAGAYQQLGDGKWREIAKLLPGRTALQVYNRIRNAPGARVKATKAAP 117          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.510e-21
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASL--GHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            S+ ED  +R   +EHG ++W+T A  L   +    RT   C  RWH  LDPTI KDPWT +EEA++AKA+Q+LG+  W+EI+KLLPGRT   + N
Sbjct:   18 SQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGN-RWSEISKLLPGRTDNAIKN 111          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 8.310e-19
Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQR 141
            ++EED ++     EHG R W    A L      RT   C  RWH QLDP INK PWT+ EE++L  A+  LG+  W EIAK LPGRT   + N   +A+R
Sbjct:   22 TQEEDNLMMALVSEHGTRHWGLIGAKLNG----RTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGN-RWAEIAKRLPGRTDNAIKNHWNSAKR 116          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A7S4JA45_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JA45_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 1.270e-18
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQR 141
            S +ED  +     EHG R W+T AA L      RT   C  RWH  LDP INK  WT +E+  L +A+  LG+  W EIAK+LPGRT  Q+ NR  +A R
Sbjct:   68 SADEDTKIAALVEEHGTRSWSTIAAQLPS----RTGKQCRERWHNHLDPIINKGEWTVEEDRKLLEAHHALGN-RWAEIAKMLPGRTDNQIKNRWNSALR 162          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN)

HSP 1 Score: 84.0 bits (206), Expect = 3.580e-17
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   44 EEDGILRRHEREHGARKWNTAAASLGHLGH--RRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            +ED  +R+   ++G R W+  A  +    +   RT   C  RWH  LDP INK+ WT++EE ++A A++ LG   W+EIAKLLPGRT   V N
Sbjct:   13 QEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKN 105          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN)

HSP 1 Score: 82.0 bits (201), Expect = 3.880e-17
Identity = 42/95 (44.21%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASL--GHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            S++ED  ++     +G R W+  A  +   +    RT   C  RWH  LDP INKD WT  EE V+A A++ LG+  W+EIAKLLPGRT   V N
Sbjct:   10 SQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGN-KWSEIAKLLPGRTDNHVKN 103          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A7S1EGS6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EGS6_HEMAN)

HSP 1 Score: 81.6 bits (200), Expect = 4.950e-17
Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            S EED ++ +  +EHG RKW   A+ L      R+   C  R+  QLDP+I KDPWT+ E+  ++ A ++ G+  WTEIAKLLPGRT   + N
Sbjct:    5 SSEEDELILKLVQEHGLRKWAIVASQLKG----RSGKQCRERFKNQLDPSIRKDPWTEDEDRAISVAQKKFGN-RWTEIAKLLPGRTDNGIKN 92          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: A0A7S0XYK2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYK2_HEMAN)

HSP 1 Score: 81.6 bits (200), Expect = 6.370e-17
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   42 SEEEDGILRRHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            ++EED ++ +  +EHG RKW   A  L      R+   C  R+  QLDP I KDPWT +E+  ++ A ++ G+  WTEIAKLLPGRT   + N
Sbjct:   41 TQEEDDLIVKLVKEHGLRKWAIVAGQLSG----RSGKQCRERYKNQLDPAIRKDPWTDEEDRQISIAQRKFGN-RWTEIAKLLPGRTDNSIKN 128          
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Match: E9HSG4_DAPPU (Uncharacterized protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9HSG4_DAPPU)

HSP 1 Score: 80.1 bits (196), Expect = 6.870e-17
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   44 EEDGILRRHEREHGARKWNTAAASL-GHLGHRRTATACSNRWHYQLDPTINKDPWTQQEEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSN 134
            +ED ++ +    +G +KW   A  L G +G +     C  RWH  LDP INK PWT++E+ +LA A++Q G+  W +IAKLLPGRT   + N
Sbjct:    1 QEDDLVVQLVHRYGPKKWTQIAKHLNGRIGKQ-----CRERWHNHLDPNINKSPWTEEEDRLLANAHEQYGN-QWAKIAKLLPGRTDNAIKN 86          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162256 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5Q9_9STRA1.810e-107100.00Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YKU0_9STRA1.840e-4771.43Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A2R5FYY8_9STRA4.510e-2149.47Transcription factor MYB118 n=1 Tax=Hondaea fermen... [more]
A0A7S0SQE8_9STRA8.310e-1945.00Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S4JA45_9EUKA1.270e-1846.00Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
F0YL28_AURAN3.580e-1743.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YL55_AURAN3.880e-1744.21Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1EGS6_HEMAN4.950e-1744.09Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0XYK2_HEMAN6.370e-1743.01Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
E9HSG4_DAPPU6.870e-1742.39Uncharacterized protein (Fragment) n=1 Tax=Daphnia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 37..90
e-value: 0.065
score: 22.4
coord: 93..142
e-value: 3.6E-11
score: 53.1
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 42..88
score: 7.305607
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 89..140
score: 9.581638
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 96..138
e-value: 1.39426E-11
score: 54.1186
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 42..85
e-value: 3.07667E-4
score: 34.8586
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 42..102
e-value: 7.8E-13
score: 48.5
NoneNo IPR availableGENE3D1.10.10.60coord: 41..93
e-value: 8.4E-11
score: 43.6
NoneNo IPR availableGENE3D1.10.10.60coord: 95..148
e-value: 1.7E-14
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..151
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 40..136
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 89..144
score: 17.036781
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 73..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:1139415..1139870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162256mRNA_4186Tribonema minus UTEX_B_3156 mRNAContig_20 1139415..1139870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162256|e_gw1.20.266.1 ID=Trimin1|162256|e_gw1.20.266.1|Name=jgi.p|Trimin1|162256|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=152bp
MGTWALQVAHNAITVYVCITVYVSATKCDFPTTGALAATTCSEEEDGILR
RHEREHGARKWNTAAASLGHLGHRRTATACSNRWHYQLDPTINKDPWTQQ
EEAVLAKAYQQLGHGHWTEIAKLLPGRTSEQVSNRIRNAQRARGKATKAA
P*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf