Trimin1|161888|e_gw1.18.76.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161888
Unique NameTrimin1|161888|e_gw1.18.76.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length130
Homology
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A836CI72_9STRA (CheY-like superfamily protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI72_9STRA)

HSP 1 Score: 256 bits (653), Expect = 3.190e-86
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 MNNDQSKPLHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVKTNKP 129
            MNNDQSKPLHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVKTNKP
Sbjct:    1 MNNDQSKPLHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVKTNKP 129          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A836CPC2_9STRA (Response regulatory domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.700e-38
Identity = 69/118 (58.47%), Postives = 92/118 (77.97%), Query Frame = 0
Query:   12 LIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMR----WSGYIVAMSANEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVK 125
            ++VEDY LSA YMSQAL++C C  +  A +GE A+E+AR +GPFDVVFVDL+MKGMGG+ CI  L+SM     W+  IVAMSA+ +L +SA+AAGAD+F+HKL  PVRDI A++ ++K
Sbjct:    1 MLVEDYQLSALYMSQALRMCGCTDVHAALNGECAIELARVKGPFDVVFVDLVMKGMGGVECIRALRSMEHDNGWTQCIVAMSADAELSSSALAAGADRFMHKLAQPVRDIFAMIASIK 118          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A835Z4T2_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T2_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.290e-37
Identity = 65/124 (52.42%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    9 LHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMR----WSGYIVAMSANEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVKTNK 128
            L VL++EDY LSA+YM QALKLC+C  + IA SGE+A+ +    GPFDVVFVDL+M GMGG+ C+  L+ M     W    VAMS++E L+  A+ AGAD+FL+KL HPVR++  I+  V   K
Sbjct:    6 LLVLLIEDYALSAKYMMQALKLCNCEEVVIASSGEEAIHITEKHGPFDVVFVDLVMSGMGGLECMKQLRQMETRNGWRQRFVAMSSDEHLKQDALDAGADEFLYKLAHPVREVGIIIKLVDETK 129          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A536WNC6_9PROT (Response regulator transcription factor n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WNC6_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 9.610e-8
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 0
Query:    7 KPLHVLIVEDYNLSAQYMSQALKLCDCRS----IQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSA--NEDLRTSAIAAGADKFLHKLD-----HPVRDIV 118
            K + V++V+D   S Q+ S   +   C      +  A SG +A+  A ++ P D++F+D+ M GM G+A  S++K    +  IV M+   +E+ R  AIAAGAD FL K D     H V D++
Sbjct:    2 KRIRVMVVDD---SLQFASAVGQFLACNGNFEVLASATSGGEALARASTERP-DLMFIDISMPGMNGLAVTSLIKGRNAAPKIVMMTLEDSEEHRVGAIAAGADAFLPKDDFAHGFHAVLDLL 120          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A2V7KCU7_9BACT (DNA-binding response regulator n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7KCU7_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 9.630e-8
Identity = 39/125 (31.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:    7 KPLHVLIVEDYNLSAQYMSQAL-KLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSA--NEDLRTSAIAAGADKFLHKLDHPVRDIVAIVNAVKTNK 128
            KP+H+L+ +D+      +   L +  + R +  A +GE+A++ AR+  P DVV +DL+M GMGG+  +  + ++     I+ +SA   ED     +AAGA  F+ K   PV ++   + +V  N+
Sbjct:   11 KPIHILLADDHWAVRAGLHALLDRQANLRVVGEAATGEEALKQARALKP-DVVLMDLVMPGMGGLEAMRRIAALHAGTKILVLSAYLQEDRLLDVLAAGASGFVSK-GSPVENLTRAIRSVAQNE 133          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: UPI001BAD0279 (sigma-54 dependent transcriptional regulator n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BAD0279)

HSP 1 Score: 59.3 bits (142), Expect = 1.080e-7
Identity = 38/116 (32.76%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   11 VLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRT--SAIAAGADKFLHKLDHPVRDIVAIVNAV 124
            VL+V+D + + + + QA+   +  ++  AESGE A++   +  P DV+ +DL+M G+GG+A +  ++S  ++  +V ++A   + T   A+ AGA  F  K   P R +V+I NA+
Sbjct:    5 VLVVDD-DPTQRRLIQAVLEREGFAVAHAESGEAAIDRLVAGAPADVIMLDLIMPGLGGLAALKEMRSRGFNQPVVVLTATGGIDTVVQAMQAGAQDFFVKPASPERILVSIRNAL 119          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: UPI001C5623D1 (sigma-54 dependent transcriptional regulator n=1 Tax=Pseudohoeflea sp. DP4N28-3 TaxID=2860393 RepID=UPI001C5623D1)

HSP 1 Score: 59.3 bits (142), Expect = 1.100e-7
Identity = 42/123 (34.15%), Postives = 66/123 (53.66%), Query Frame = 0
Query:    8 PLHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMA-RSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRT--SAIAAGADKFLHKLDHPVRDIVAIVNAVKTN 127
            P HVLIV+D  +  + +    +    + + +AE GE A+ M  RS G FDVV +DL+M G+GGIA +  +        ++  +    + T   A+ AGA  F  K   P R ++AI NAV+++
Sbjct:    2 PSHVLIVDDDPVQRRLLKGTCERSGLK-VDLAEDGESAMSMIKRSAGGFDVVVLDLVMPGVGGIAVLEWMAENAPDIPVIVQTGQGGIETVVRAMRAGAHDFAVKPVSPERLLLAIGNAVRSS 123          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A536Z360_9PROT (Response regulator transcription factor (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Z360_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 2.420e-7
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 0
Query:    7 KPLHVLIVEDYNLSAQYMSQALKLCDCRS----IQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSA--NEDLRTSAIAAGADKFLHKLD-----HPVRDIV 118
            K + V++V+D   S Q+ S   +   C      +  A SG +A+  A ++ P D++F+D+ M GM G+A  S++K    +  IV M+   +E+ R  AIAAGAD FL K D     H V D++
Sbjct:   58 KRIRVMVVDD---SLQFASAVGQFLACNDNFEVLASANSGGEALARASTERP-DLMFIDISMPGMNGLAVTSLIKGRNAAPKIVMMTLEDSEEHRIGAIAAGADAFLPKDDFAHGFHAVLDLL 176          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A1M3NB61_9DELT (DNA-binding response regulator n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NB61_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 3.280e-7
Identity = 37/110 (33.64%), Postives = 64/110 (58.18%), Query Frame = 0
Query:    3 NDQSKPLHVLIVEDYNLSAQYMSQALKLC-DCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAM--SANEDLRTSAIAAGADKFLHK 109
            N+Q+  + VLIV+D+ +  Q +   L+   D   +  A++GE AVE+AR + P DVV +D+LM G+GG+     + ++    ++V +  S+ E+    A+ AGA  +L K
Sbjct:    2 NEQTSVVKVLIVDDHTIVRQGLRALLETQPDFTIVAEADTGEAAVELARDERP-DVVLMDVLMPGIGGVEATRRINAVHPQAHVVILTSSSEEEHVVPALRAGALSYLSK 110          
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Match: A0A7C4JZ73_9BACT (Response regulator n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7C4JZ73_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 4.380e-7
Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   11 VLIVEDYNLSAQYMSQALKLC---DCRSIQIAESGEQAVEMARSQGPFDVVFVDLLMKGMGGIACIS-VLKSMRWSGYIVAMSANEDLRT--SAIAAGADKFLHKLDHPVRDIVAI 120
            VLIV+D     + +S  ++         +    +GE A+EM     P++V+F+D+ M G+GG+A    + K    +  +VA+S N+DL T  S + +GA  +LHK D  +  +V I
Sbjct:    8 VLIVDDNPTFVKTLSLLVQTVLGNKLSQLDTVSTGEDAIEMVSMNTPYNVIFMDVNMPGIGGVAATKEISKEYYRATRVVAVSFNKDLETMKSMLFSGATYYLHKDDLTLEKLVEI 123          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161888 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI72_9STRA3.190e-86100.00CheY-like superfamily protein n=2 Tax=Tribonema mi... [more]
A0A836CPC2_9STRA2.700e-3858.47Response regulatory domain-containing protein n=1 ... [more]
A0A835Z4T2_9STRA4.290e-3752.42CheY-like superfamily protein n=1 Tax=Tribonema mi... [more]
A0A536WNC6_9PROT9.610e-834.96Response regulator transcription factor n=2 Tax=Be... [more]
A0A2V7KCU7_9BACT9.630e-831.20DNA-binding response regulator n=1 Tax=Gemmatimona... [more]
UPI001BAD02791.080e-732.76sigma-54 dependent transcriptional regulator n=1 T... [more]
UPI001C5623D11.100e-734.15sigma-54 dependent transcriptional regulator n=1 T... [more]
A0A536Z360_9PROT2.420e-734.96Response regulator transcription factor (Fragment)... [more]
A0A1M3NB61_9DELT3.280e-733.64DNA-binding response regulator n=1 Tax=Myxococcale... [more]
A0A7C4JZ73_9BACT4.380e-731.90Response regulator n=1 Tax=Bacteroidales bacterium... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 9..121
e-value: 5.5E-14
score: 62.5
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 11..110
e-value: 1.7E-17
score: 63.6
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 10..124
score: 24.521219
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..128
e-value: 1.7E-24
score: 88.1
NoneNo IPR availablePIRSRPIRSR002937-1PIRSR002937-1coord: 8..109
e-value: 1.9E-8
score: 30.6
NoneNo IPR availablePANTHERPTHR43228TWO-COMPONENT RESPONSE REGULATORcoord: 4..113
NoneNo IPR availableCDDcd17546REC_hyHK_CKI1_RcsC-likecoord: 11..115
e-value: 1.24116E-18
score: 73.2725
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 7..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1311969..1312358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161888mRNA_1519Tribonema minus UTEX_B_3156 mRNAContig_18 1311969..1312358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161888|e_gw1.18.76.1 ID=Trimin1|161888|e_gw1.18.76.1|Name=jgi.p|Trimin1|161888|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=130bp
MNNDQSKPLHVLIVEDYNLSAQYMSQALKLCDCRSIQIAESGEQAVEMAR
SQGPFDVVFVDLLMKGMGGIACISVLKSMRWSGYIVAMSANEDLRTSAIA
AGADKFLHKLDHPVRDIVAIVNAVKTNKP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily