Trimin1|161866|e_gw1.18.273.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161866
Unique NameTrimin1|161866|e_gw1.18.273.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length280
Homology
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BLAST of jgi.p|Trimin1|161866 vs. uniprot
Match: A0A835Z7I5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I5_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 1.130e-164
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0 
Query:    1 MTCLPPLPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPFTLEKLHMSAAYNXXLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQVLDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDDDSIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLECVEYNHSLAPLPLTLQHLLIWNAAXXXXXXXXXXSLVELRIHPAEPGEQGAYTHRLQPIHPALKAVAISRDYAYLDDLAGVELAHNGMWR 279
            MTCLPPLPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPFTLEKLHMSAAYNXXLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQVLDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDDDSIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLECVEYNHSLAPLPLTLQHLLIWNAAXXXXXXXXXXSLVELRIHPAEPGEQGAYTHRLQPIHPALKAVAISRDYAYLDDLAGVELAHNGMWR
Sbjct:    1 MTCLPPLPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPFTLEKLHMSAAYNXXLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQVLDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDDDSIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLECVEYNHSLAPLPLTLQHLLIWNAAXXXXXXXXXXSLVELRIHPAEPGEQGAYTHRLQPIHPALKAVAISRDYAYLDDLAGVELAHNGMWR 279
[Close]
BLAST of jgi.p|Trimin1|161866 vs. uniprot
Match: A0A835Z5R0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R0_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.330e-85
Identity = 183/274 (66.79%), Postives = 206/274 (75.18%), Query Frame = 0 
Query:    4 LPPLPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPFTLEKLHMSAAYNXXLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQVLDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDDDSIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLECVEYNHSLAPLPLTLQHLLIWNAAXXXXXXXXXXSLVELRIHPAEPGEQGAYTHRLQPIHPALKAVAISRDYAYLDDLAGVELAHNGM 277
            LPPLPHTLRELD+S   ++   GPLPPHLTSLS S  S   +G+LP TLE+L ++AA+   LG LPA L ++ TSD  +D  EFDQ FGELP  LQVLDL+ F  FN  L ALP HL+ LTLGC  +Q LG LPDTLE L+FYDG   SIF+XXXXXXXXXXXXX   XXXXXXXXXXXXXX YLEC+  +  LAPLP +LQHLLIWN+A          SLVELRI PA PGE GAY HRLQPIHP+LKAVAISRDYAYLDDLAGV+LAHN M
Sbjct:  207 LPPLPHTLRELDLSAACIQS--GPLPPHLTSLSTSQDSGEPIGDLPITLERLAVNAAFEQRLGHLPACL-KVITSDLDDD-VEFDQLFGELPPQLQVLDLISFSEFNQHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNXXXXXXXXXXXXXRLSXXXXXXXXXXXXXXEYLECM-VSQPLAPLPCSLQHLLIWNSAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDYAYLDDLAGVKLAHNDM 475
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161866 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z7I5_9STRA1.130e-164100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5R0_9STRA1.330e-8566.79Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..231
e-value: 2.3E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 26..176
coord: 101..230
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 26..176
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 101..230
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1077437..1078276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161866mRNA_1446Tribonema minus UTEX_B_3156 mRNAContig_18 1077437..1078276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161866|e_gw1.18.273.1 ID=Trimin1|161866|e_gw1.18.273.1|Name=jgi.p|Trimin1|161866|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=280bp
MTCLPPLPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPF
TLEKLHMSAAYNEPLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQV
LDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDD
DSIFDQPLGPLPQSLRKLHLSSAFNQALGLLPPRLEYLECVEYNHSLAPL
PLTLQHLLIWNAAYNHDLGALPPSLVELRIHPAEPGEQGAYTHRLQPIHP
ALKAVAISRDYAYLDDLAGVELAHNGMWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf