Trimin1|161847|e_gw1.18.255.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161847
Unique NameTrimin1|161847|e_gw1.18.255.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length366
Homology
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BLAST of jgi.p|Trimin1|161847 vs. uniprot
Match: A0A836CL57_9STRA (EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL57_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.190e-15
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:    1 MVNVKAPRCAHPECKTRPSFGEEGGSAMYCATHALEGM 38
            MVNVKAPRCAHPECKTRPSFGEEGGSAMYCATHALEGM
Sbjct:    1 MVNVKAPRCAHPECKTRPSFGEEGGSAMYCATHALEGM 38
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161847 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CL57_9STRA1.190e-15100.00EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 268..300
e-value: 6.9E-7
score: 29.7
coord: 157..190
e-value: 1.1E-5
score: 25.9
coord: 83..116
e-value: 3.0E-9
score: 37.2
coord: 342..366
e-value: 0.0074
score: 16.9
coord: 46..79
e-value: 5.6E-8
score: 33.2
coord: 194..227
e-value: 4.1E-6
score: 27.3
coord: 305..338
e-value: 3.6E-8
score: 33.8
coord: 231..264
e-value: 1.6E-6
score: 28.6
coord: 120..153
e-value: 1.5E-7
score: 31.9
coord: 9..42
e-value: 1.5E-9
score: 38.2
NoneNo IPR availableGENE3D6.10.140.110coord: 140..197
e-value: 3.9E-9
score: 38.6
coord: 206..250
e-value: 1.4E-7
score: 33.6
coord: 251..308
e-value: 2.0E-10
score: 42.8
coord: 99..139
e-value: 3.7E-5
score: 25.9
coord: 24..75
e-value: 5.2E-10
score: 41.4
coord: 317..366
e-value: 2.9E-7
score: 32.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:936510..937607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161847mRNA_1397Tribonema minus UTEX_B_3156 mRNAContig_18 936510..937607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161847|e_gw1.18.255.1 ID=Trimin1|161847|e_gw1.18.255.1|Name=jgi.p|Trimin1|161847|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp
MVNVKAPRCAHPECKTRPSFGEEGGSAMYCATHALEGMVDVKSKRCEHQD
CTKQPCYGKEGGKATHCGEHASDGMVNVKSRHCAHPECVTRPSYGEEGGS
PSHCAQHAEKGMVNVVDRRCAHTECMTRPCFGKEGGSPSHCAQHAEEGMV
DIRNRRCAHPECITCPCYGKEGGRATHCATHAAEGMVNVKRRRCIHPGCM
VTANYGEEGSSADYCSKHALEGMVDIKSRRCAHPECITYPCYGKEGGRAT
HCAQHAEAGMLNVKHRRCAHTECMTIPCYGQEGESPTHCAQHAEEGMVDV
QNRRCMHPECMTTATYAKEGDRATHCAKHAEDGMVNVKDRRCTHPECMTR
PSYGEEGGSATHCAKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys