Trimin1|161776|e_gw1.18.17.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161776
Unique NameTrimin1|161776|e_gw1.18.17.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length281
Homology
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BLAST of jgi.p|Trimin1|161776 vs. uniprot
Match: A0A835Z893_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z893_9STRA)

HSP 1 Score: 486 bits (1252), Expect = 1.460e-172
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0 
Query:    1 MHAAASQNTSRLTAERHLLRAVEDNDGARVTELLQRYSDLDAEDVYHHTALMLAVQEGFTGIVSTLLRHNGEERVEAVDEDGLTPLMFACVPDRVRLIPKLLRHGSDPVARXXXXXXXXXXXXXXXXXXXXXXXXKDASAQQQVMAMSDDESFVTPLLIAESEGHTEAVRELLTCSPQVQLTYRSPSGATPLMVAVDGRHSNNHEILMVLILAGLPLQQLVDFESPAVSATMSAGSYNYGLHVITETLQRLQSYNSYAEYASGARRGGGFRGRRSRSLGR 280
            MHAAASQNTSRLTAERHLLRAVEDNDGARVTELLQRYSDLDAEDVYHHTALMLAVQEGFTGIVSTLLRHNGEERVEAVDEDGLTPLMFACVPDRVRLIPKLLRHGSDPVARXXXXXXXXXXXXXXXXXXXXXXXXKDASAQQQVMAMSDDESFVTPLLIAESEGHTEAVRELLTCSPQVQLTYRSPSGATPLMVAVDGRHSNNHEILMVLILAGLPLQQLVDFESPAVSATMSAGSYNYGLHVITETLQRLQSYNSYAEYASGARRGGGFRGRRSRSLGR
Sbjct:    1 MHAAASQNTSRLTAERHLLRAVEDNDGARVTELLQRYSDLDAEDVYHHTALMLAVQEGFTGIVSTLLRHNGEERVEAVDEDGLTPLMFACVPDRVRLIPKLLRHGSDPVARXXXXXXXXXXXXXXXXXXXXXXXXKDASAQQQVMAMSDDESFVTPLLIAESEGHTEAVRELLTCSPQVQLTYRSPSGATPLMVAVDGRHSNNHEILMVLILAGLPLQQLVDFESPAVSATMSAGSYNYGLHVITETLQRLQSYNSYAEYASGARRGGGFRGRRSRSLGR 280
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161776 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z893_9STRA1.460e-172100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 81..110
e-value: 54.0
score: 12.7
coord: 46..77
e-value: 5.6
score: 15.9
coord: 152..181
e-value: 270.0
score: 9.2
coord: 114..143
e-value: 7.8
score: 15.4
coord: 187..219
e-value: 73.0
score: 12.2
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 19..112
e-value: 1.6E-9
score: 38.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 114..138
e-value: 0.0024
score: 18.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 81..113
score: 10.20539
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..248
e-value: 5.0E-38
score: 132.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..207
NoneNo IPR availablePANTHERPTHR24124ANKYRIN REPEAT FAMILY Acoord: 71..208
coord: 4..138
NoneNo IPR availablePANTHERPTHR24124:SF11LP07441Pcoord: 4..138
NoneNo IPR availablePANTHERPTHR24124:SF11LP07441Pcoord: 71..208
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 81..112
score: 8.852755

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1218677..1219519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161776mRNA_1486Tribonema minus UTEX_B_3156 mRNAContig_18 1218677..1219519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161776|e_gw1.18.17.1 ID=Trimin1|161776|e_gw1.18.17.1|Name=jgi.p|Trimin1|161776|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=281bp
MHAAASQNTSRLTAERHLLRAVEDNDGARVTELLQRYSDLDAEDVYHHTA
LMLAVQEGFTGIVSTLLRHNGEERVEAVDEDGLTPLMFACVPDRVRLIPK
LLRHGSDPVARDSDGLTALMRAAYAGHVTVISALLKDASAQQQVMAMSDD
ESFVTPLLIAESEGHTEAVRELLTCSPQVQLTYRSPSGATPLMVAVDGRH
SNNHEILMVLILAGLPLQQLVDFESPAVSATMSAGSYNYGLHVITETLQR
LQSYNSYAEYASGARRGGGFRGRRSRSLGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf