Trimin1|161576|e_gw1.17.239.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161576
Unique NameTrimin1|161576|e_gw1.17.239.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length118
Homology
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BLAST of jgi.p|Trimin1|161576 vs. uniprot
Match: A0A835Z734_9STRA (WW domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z734_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.950e-81
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:    1 MSTHSNASASSKELLHLAFTSSRGRQDTGSHHSSRHKPIVVTKDVIKAAELLGMVLPDDERYLQIAVDCVSAVDFPDWEMLTDEGTGELYYWNQSAKVSAWENPKHEYYKNLFLQRKA 118
            MSTHSNASASSKELLHLAFTSSRGRQDTGSHHSSRHKPIVVTKDVIKAAELLGMVLPDDERYLQIAVDCVSAVDFPDWEMLTDEGTGELYYWNQSAKVSAWENPKHEYYKNLFLQRKA
Sbjct:    1 MSTHSNASASSKELLHLAFTSSRGRQDTGSHHSSRHKPIVVTKDVIKAAELLGMVLPDDERYLQIAVDCVSAVDFPDWEMLTDEGTGELYYWNQSAKVSAWENPKHEYYKNLFLQRKA 118
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161576 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z734_9STRA5.950e-81100.00WW domain-containing protein (Fragment) n=1 Tax=Tr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainPFAMPF00397WWcoord: 76..104
e-value: 8.0E-7
score: 29.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 76..106
score: 10.4231
IPR001202WW domainCDDcd00201WWcoord: 76..104
e-value: 0.00117018
score: 32.4998
NoneNo IPR availableGENE3D2.20.70.10coord: 76..116
e-value: 8.8E-7
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..36
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 76..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:300102..300455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161576mRNA_3345Tribonema minus UTEX_B_3156 mRNAContig_17 300102..300455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161576|e_gw1.17.239.1 ID=Trimin1|161576|e_gw1.17.239.1|Name=jgi.p|Trimin1|161576|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=118bp
MSTHSNASASSKELLHLAFTSSRGRQDTGSHHSSRHKPIVVTKDVIKAAE
LLGMVLPDDERYLQIAVDCVSAVDFPDWEMLTDEGTGELYYWNQSAKVSA
WENPKHEYYKNLFLQRKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf