Trimin1|161532|e_gw1.17.135.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161532
Unique NameTrimin1|161532|e_gw1.17.135.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length263
Homology
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A835Z6G1_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6G1_9STRA)

HSP 1 Score: 513 bits (1320), Expect = 1.580e-183
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKSDQQALTARLCKLTGVAKVCT 262
            EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKSDQQALTARLCKLTGVAKVCT
Sbjct:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKSDQQALTARLCKLTGVAKVCT 262          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 5.190e-35
Identity = 79/195 (40.51%), Postives = 123/195 (63.08%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNF-LHTALAHHPPTPVHMPPIAPSAGL--ILESTIMIRRLKEQVLSQM 192
            +A+A+A AY ++WP+LV+ P++L+DNWRNE +KWVP L    + +V+D+   +  S    Q  +V+Y L  R+V    L  GQF +V ADESH LK+  A+R+Q+ +P++++A+RAIC++GTP LSRPAE+ +  +     +  +   F +    A   P  + +   + SA L  ILE+ IM+RRLKE+V   M
Sbjct:  147 QALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGVRDS---AQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELM 338          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A7R9ZF25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF25_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.450e-29
Identity = 80/235 (34.04%), Postives = 122/235 (51.91%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTS-------------NGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGL----ILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDS-RQELSALL 217
            ++IA   AY DE PLLVLCP+++R NW+ E+L+W+ +  ++G    ++    L T              N   +  V +Y L   +V  G +    F  +  DESHMLK   AQRT++ALPIL+ A R I LSGTP    PAE+            W+++        +   T      +     L    ++ ST+MIRR K+ VL ++LP+K R++ HVAV   S R++L++L+
Sbjct:  231 QSIAAMCAYVDEGPLLVLCPSSVRFNWKAEVLQWLGKERNNGTGAPREQHPALLTELNVQVFNSGKDEINKDAKVIVASYDLFTNMVKKGKIVESTFARIIVDESHMLKNTKAQRTKAALPILKAAKRCILLSGTPAFKNPAELFPQLYVLGGGKWWANEKEFREKYCYKSST------VGGRNNLELYSLMASTVMIRRKKDDVLKEVLPKKNRDLAHVAVDDPSDRKKLNSLM 459          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: L1IS15_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IS15_GUITC)

HSP 1 Score: 122 bits (306), Expect = 3.090e-28
Identity = 89/267 (33.33%), Postives = 141/267 (52.81%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVP-RLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTAL----AHHPPTPVHMPPIAPSAGL--ILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKSDQQALTARLCKLTGVAKV 260
            +AIAIAAAY DEWPLL++CP+++R  W  EL+ W+P  L    V  +      +    G +   +++Y L  +      + + QF+V+  DESH LK   A+R+++ LP +R A R+I L+GTP LSRP E+  +    +S      +NFL  A     AH  P  +     +    L  +L+   M+RRLK+ VL+Q LP KRR+ I + ++    +  +  + +   +     D     E   RA+S ++AL  ++   TGVAK+
Sbjct:  111 QAIAIAAAYLDEWPLLIVCPSSMRCMWAQELVNWLPGELTPQDVNTIFSGRDVV----GNQLVTIISYDLFCKFAPE--ISSMQFKVIIGDESHYLKNPNAKRSKTILPFIRSARRSILLTGTPALSRPVELFNLL---NSLHPRLFNNFLEFAYRYCDAHQGPFGLETSGASNLEELHVLLDQHTMVRRLKKDVLTQ-LPAKRRQKILIKISEAESKRFATEMDKLKELERVTQDEEEDSEARFRAQSRKKALIMKMYVDTGVAKL 367          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A0L0H6Z5_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H6Z5_SPIPD)

HSP 1 Score: 121 bits (303), Expect = 1.760e-27
Identity = 90/281 (32.03%), Postives = 141/281 (50.18%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVT-YGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIM---------------TRPCDSTSC---WSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKS--DQQALTARLCKLTGVAKV 260
            +AIAI A Y  EWP++V+CP++LR  W+ E+ KW+  L    + V+  S   + + +     FV+T Y L  R      L   ++R+V ADESH LK+  A+RT++ +P+L+ A RA+ LSGTP LSRP E+                   R CD       W      + A  H                  LE T++IRRLK+ VL + LP K R+ ++V +A  S+Q  +AL++Q   I   + D   +     R +   +++ L  ++ + TG+AK+
Sbjct:  233 QAIAICAFYRSEWPVMVICPSSLRLTWQAEICKWLD-LPEERIQVIFASKDRVSSESH----FVITSYDLASREDIKKQLEKAKYRIVVADESHFLKSREAKRTKTIIPLLKGAKRALLLSGTPALSRPIELFTQISALLPSFTTAVQFGVRYCDGKQNRYGWDFTGNSNIAELHW----------------FLEQTVLIRRLKKDVLKE-LPSKTRQCVYVDIAAKSKQTFAALMAQNEEINERLEDAKTASNTKHRQEVTLEKRTLLIQMYRETGIAKL 491          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A1R2CQ71_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQ71_9CILI)

HSP 1 Score: 120 bits (302), Expect = 2.180e-27
Identity = 80/224 (35.71%), Postives = 117/224 (52.23%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEV----------------CIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARD 208
            +AIA A AY DEWP+LV+CP +++ NWR+E LKWVP L      VVK       T     + ++ +Y +   ++ +  L +    VV ADE H LK   A+RT++ LPIL+ A R + LSGTPV+SRPAE+                    R CD    ++H ++  ++      T             ++ +T+MIRRLK  V+S+ LPEK R+ I + V  D
Sbjct:  222 QAIAAAYAYVDEWPVLVICPASIKLNWRDEFLKWVPGLEKKDFYVVKSKK----TMKNSAKVWIASYNMA--MLLDALLCSKVLNVVIADECHYLKNYNAKRTKNILPILQRARRVLLLSGTPVMSRPAELYTQLSAIRPDVFFNFKVFADRYCDPKVLFTHTDYSGSSNIKELHT-------------LISNTVMIRRLKADVMSE-LPEKVRQKIEIPVVAD 425          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A7S1DJ47_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DJ47_HEMAN)

HSP 1 Score: 111 bits (278), Expect = 8.630e-27
Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEV 131
            +A+++AAAYADEWP+LVLCP +LR NW  E+ +W+P +    V V+  S+ +        +  + +Y L+PRL  +     G FRVV ADESH LK+  + R ++  P+LR A RA+ LSGTP L+RP E+
Sbjct:   10 QALSVAAAYADEWPMLVLCPASLRLNWAAEVQRWLPGVARGDVRVLF-SARDAPPGGDPPRVTIASYDLMPRLAPS---MKGMFRVVLADESHYLKSHSSLRAKACAPLLRAARRAVLLSGTPALARPCEL 136          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A0F7UMM8_NEOCL (SNF2 family N-terminal domain-containing protein,putative n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=A0A0F7UMM8_NEOCL)

HSP 1 Score: 119 bits (298), Expect = 9.270e-27
Identity = 95/283 (33.57%), Postives = 140/283 (49.47%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCS-SGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEV-----------CIMTRPCD--STSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAIV---------SAMSDPNLSREQL-ARAKSDQQALTARLCKLTGVAK 259
            +A+AIAA Y +EWP LV+CP+++R  WR++ L+W+  L     + +VK   +E+    GR +  +++Y L+ +           ++VV  DESH LK   A+RTQ+  P+LR A RAI LSGTP L+RP E+           C      D  S   W+          H  P  +H         L+L+ TIMIRRLKEQV S+ LP K R  + + +     +E+   +++  A           SAMS P+ + E    R  +    L   L  LTG+AK
Sbjct:  632 QALAIAAFYHNEWPFLVICPSSIRFQWRDQALRWLSELLVLDEICLVKSGRAEI---PGRTKMVIISYDLITKQKK----FMAPYQVVICDESHYLKNYQAKRTQAICPLLRSAKRAILLSGTPALNRPVELFQQFDALLPDLCTYREFADRYSVQVWNPFTRHFEYEGHQHPEELH---------LLLKHTIMIRRLKEQVHSE-LPRKIRSRVPIEIPAKELKEIREKMAELEAEGRPEAFLGGDSAMSGPDPNPENTDQRVSASSSPLVVELFTLTGLAK 897          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: A0A7S1U711_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U711_9STRA)

HSP 1 Score: 119 bits (297), Expect = 9.990e-27
Identity = 92/291 (31.62%), Postives = 139/291 (47.77%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPR--LCSSGVTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVC-------------------IMTRPCDS---TSCWSHDNFLHTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQRSAI-------VSAMSDPNLSREQLARAKSDQQALTARLCKLTGVAKV 260
            + +A AA Y  +WPLLVL P  +R NW+ EL+K++P   L    V VV   +  +  S       ++++ ++ +L +   L    F  + ADESH LK+  A+RTQ+ALP++R A R + L+GTP LSRPAE+                     MTR CD+   T  W      + A                    +L  TIM+RRLK QVL++ +P K R +  V    + R+E+     Q + I         + +  N + E+L + KS++  L  RL  L G AK+
Sbjct:  198 QGVAFAAHYRADWPLLVLTPAGVRANWKKELMKFLPECVLADDEVRVVTKLADPIDDS----PVVILSWSMIEKLTSQKRLKPKMFGAIIADESHFLKSLDAKRTQAALPLMRAARRLLLLTGTPALSRPAELWPQLHAIAADTLFPRAAMNEFMTRYCDAHQGTFGWDTRGASNEA----------------ELAALLRDTIMVRRLKAQVLAENMPGKMRIMTCVEAPDEVRKEIDDGREQLNDIEMQIRNGARSTAGGNSADERLHKLKSERDTLMMRLWTLAGRAKI 468          
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Match: L1JAD3_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAD3_GUITC)

HSP 1 Score: 116 bits (290), Expect = 3.380e-26
Identity = 78/225 (34.67%), Postives = 125/225 (55.56%), Query Frame = 0
Query:    1 EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSG--VTVVKDSSSELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGAQRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFLHTALAHHPPTPVHMPPIAPSA----GLILESTIMIRRLKEQVLSQMLPEKRREIIHVAVARDSRQELSALLSQ 219
            +A+A+AAAY  EWPLL++CP++LR NW  E  +W+  +      V VV   S  +   +      +V+Y L  R+  +  + A  F+VV ADESH +KT  A RT++ +P+LR+A+RAI LSGTP LSRP E+ +    C     +S          +       +     S      ++L S++MIRRLK +VL + LP KRR+ + + VA    +++ +++++
Sbjct:   48 QALAVAAAYKREWPLLIICPSSLRLNWAQECSRWLEGMKEEPLEVQVVMKGSDAIKGVD----VTIVSYDLATRM--SDAIKASSFKVVIADESHYIKTDKALRTRACMPLLRQASRAILLSGTPALSRPVEL-LSQLQCLQPKIFSSKREFQRRYCNAKQGRWGLDTSGASCLQELSILLSSSVMIRRLKREVLVE-LPAKRRQKVFINVANKDLKKIQSIMNR 264          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161532 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6G1_9STRA1.580e-183100.00SNF2 family N-terminal domain-containing protein n... [more]
D8LK86_ECTSI5.190e-3540.51Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A7R9ZF25_9STRA3.450e-2934.04Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
L1IS15_GUITC3.090e-2833.33Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A0L0H6Z5_SPIPD1.760e-2732.03Uncharacterized protein n=2 Tax=Spizellomyces punc... [more]
A0A1R2CQ71_9CILI2.180e-2735.71Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S1DJ47_HEMAN8.630e-2744.27Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A0F7UMM8_NEOCL9.270e-2733.57SNF2 family N-terminal domain-containing protein,p... [more]
A0A7S1U711_9STRA9.990e-2731.62Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
L1JAD3_GUITC3.380e-2634.67Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 14..222
e-value: 2.4E-16
score: 59.5
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..158
e-value: 2.7E-18
score: 67.9
IPR030101SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1PANTHERPTHR45766:SF3SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1coord: 2..260
NoneNo IPR availablePANTHERPTHR45766DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBERcoord: 2..260
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..141
score: 12.269556
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:40452..42671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161532mRNA_3313Tribonema minus UTEX_B_3156 mRNAContig_17 40452..42671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161532|e_gw1.17.135.1 ID=Trimin1|161532|e_gw1.17.135.1|Name=jgi.p|Trimin1|161532|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
EAIAIAAAYADEWPLLVLCPTALRDNWRNELLKWVPRLCSSGVTVVKDSS
SELCTSNGRRQAFVVTYGLLPRLVANGHLHAGQFRVVCADESHMLKTAGA
QRTQSALPILREATRAICLSGTPVLSRPAEVCIMTRPCDSTSCWSHDNFL
HTALAHHPPTPVHMPPIAPSAGLILESTIMIRRLKEQVLSQMLPEKRREI
IHVAVARDSRQELSALLSQRSAIVSAMSDPNLSREQLARAKSDQQALTAR
LCKLTGVAKVCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR030101HARP(SMARCAL1)
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase