Trimin1|161406|e_gw1.17.236.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161406
Unique NameTrimin1|161406|e_gw1.17.236.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length107
Homology
[Close]
BLAST of jgi.p|Trimin1|161406 vs. uniprot
Match: A0A835ZAP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP3_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.420e-78
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MCVHVLNAQVAIQCQTCKGFFDCAECHDSAPVVNHGFCPGNGVVTFTCKQCQIVFQKDLATFDDLDKACPNCHTCFVMQAMTPEGQLHAHCMKLLDADLEEILQGF 106
            MCVHVLNAQVAIQCQTCKGFFDCAECHDSAPVVNHGFCPGNGVVTFTCKQCQIVFQKDLATFDDLDKACPNCHTCFVMQAMTPEGQLHAHCMKLLDADLEEILQGF
Sbjct:    1 MCVHVLNAQVAIQCQTCKGFFDCAECHDSAPVVNHGFCPGNGVVTFTCKQCQIVFQKDLATFDDLDKACPNCHTCFVMQAMTPEGQLHAHCMKLLDADLEEILQGF 106
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161406 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZAP3_9STRA1.420e-78100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28082:SF2ZINC FINGER PROTEINcoord: 1..90
NoneNo IPR availablePANTHERPTHR28082ZINC FINGER PROTEINcoord: 1..90
IPR037274Zinc finger, CHY-type superfamilySUPERFAMILY161219CHY zinc finger-likecoord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:398614..398934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161406mRNA_3364Tribonema minus UTEX_B_3156 mRNAContig_17 398614..398934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161406|e_gw1.17.236.1 ID=Trimin1|161406|e_gw1.17.236.1|Name=jgi.p|Trimin1|161406|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
MCVHVLNAQVAIQCQTCKGFFDCAECHDSAPVVNHGFCPGNGVVTFTCKQ
CQIVFQKDLATFDDLDKACPNCHTCFVMQAMTPEGQLHAHCMKLLDADLE
EILQGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037274Znf_CHY_sf