Trimin1|161169|e_gw1.16.207.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161169
Unique NameTrimin1|161169|e_gw1.16.207.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length195
Homology
[Close]
BLAST of jgi.p|Trimin1|161169 vs. uniprot
Match: A0A836CJ35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ35_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.850e-31
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    1 MVASAKCQHPLCTRKAFYLFDGGPIQFCSQHKLAGQHDSRNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGEHCCPPPSSSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPPGERGQV 144
            MVASAKCQHPLCTRKAFYLFDGGPIQFCSQHKLAGQHDSRNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGEHCCPPPSSSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPPGERGQV
Sbjct:    1 MVASAKCQHPLCTRKAFYLFDGGPIQFCSQHKLAGQHDSRNRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGEHCCPPPSSSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPPGERGQV 144
[Close]
BLAST of jgi.p|Trimin1|161169 vs. uniprot
Match: A0A835YV08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV08_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.030e-11
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    6 KCQHPLCTRKAFYLFDGGPIQFCSQHKLAGQHDSRNRR 43
            KC+HP CTRKAFYL DGG ++FCS HKL G HDSRNRR
Sbjct:    2 KCEHPTCTRKAFYLHDGGAVRFCSLHKLGGMHDSRNRR 39
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161169 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CJ35_9STRA7.850e-31100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YV08_9STRA2.030e-1176.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 100..161
e-value: 2.3E-9
score: 39.4
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 44..76
e-value: 1.7E-6
score: 28.5
coord: 161..194
e-value: 3.3E-4
score: 21.2
coord: 7..36
e-value: 0.019
score: 15.5
coord: 124..156
e-value: 4.2E-7
score: 30.4
coord: 81..120
e-value: 1.4E-5
score: 25.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:202011..205661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161169mRNA_2941Tribonema minus UTEX_B_3156 mRNAContig_16 202011..205661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161169|e_gw1.16.207.1 ID=Trimin1|161169|e_gw1.16.207.1|Name=jgi.p|Trimin1|161169|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=195bp
MVASAKCQHPLCTRKAFYLFDGGPIQFCSQHKLAGQHDSRNRRCESEGCS
RRPYFSFPTEKPRFCSSHKLEGMADVQSRRCDAPGCDRRPYYGEHCCPPP
SSSPRRFCSAHKLPNMFDVKNRRCAAAGCKKQPIYAPPGERGQVCSAHKA
PGMVNIQKRACGAAGCRAPPTHNRDGERAAWCAAHAAPGMVVVKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys