Trimin1|161047|e_gw1.15.133.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|161047
Unique NameTrimin1|161047|e_gw1.15.133.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length284
Homology
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A836CKV9_9STRA (Ion transport protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV9_9STRA)

HSP 1 Score: 539 bits (1388), Expect = 3.450e-193
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query:    1 LNSPALFDTASMAAAVEVHWQLYGRSGHIRSLGLYILLISDFVVCTIWFHALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISER 283
            LNSPALFDTASMAAAVEVHWQLYGRSGHIRSLGLYILLISDFVVCTIWFHALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISER
Sbjct:    1 LNSPALFDTASMAAAVEVHWQLYGRSGHIRSLGLYILLISDFVVCTIWFHALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISER 283          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A836CMZ4_9STRA (Ion_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.870e-22
Identity = 88/298 (29.53%), Postives = 135/298 (45.30%), Query Frame = 0
Query:    1 LNSPALFDTASMAAAVEVHWQLYGRSGHI-RSLGLYILLISDFVVCTIWFHALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVAL-------------LLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSP---SFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIIS 281
            L    LF T  +AA V+ +W        + R   L++ L+  FV+ + WF             +W  +  KL   +  +  E    ++     +  I +Y  D WNL+D   Y L+  G+A + +      A+  +S  AL             LLWFK++YF+                    R  L+ILLVV++GFANAFY IL             T  A     ++L  G  P   SFS+ W++VRS ++Y+ G +DL+ELD G  P LLS LW   M+L  ++LL ++I ++ 
Sbjct:  129 LGHSDLFGTPVVAALVQAYWHKSRSEMRLMRQCVLHLGLLVSFVLASRWF-------------SWVFEVAKLAFLVPLILHERLSFRAN----EHSIGKYLEDSWNLVDPIMYLLVIAGIAMRAAVHILSSANGADSAAALXXXXXXXXXXXXXLLWFKIIYFL--------------------RLILLILLVVLLGFANAFYVILKHPDHPPSACAAETDAA----LKQLCEGAEPPPGSFSTMWRSVRSVMAYVFGDFDLNELDEGPTPALLSCLWFLLMVLAPVLLLKIIITLLG 385          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A835YQC1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.660e-16
Identity = 51/114 (44.74%), Postives = 79/114 (69.30%), Query Frame = 0
Query:  170 MRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSP--SFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIIS 281
            +R FLVILL+ ++GFANAFYAILG+    +       ST +    ++L     P  SF++PW+A+R++L+Y+ G +DL  LD G  PVLLSLLW A M+++ ++LLN++IA+++
Sbjct:   13 LRLFLVILLLALLGFANAFYAILGK----EGSGAVDCSTVQDGDLQELCQANEPPGSFATPWRAIRTTLAYVFGDFDLAALDDGPTPVLLSLLWCALMVVLPVLLLNLIIAVLN 122          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: J9HTK9_9SPIT (WD-40 repeat protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HTK9_9SPIT)

HSP 1 Score: 88.6 bits (218), Expect = 5.720e-16
Identity = 70/225 (31.11%), Postives = 114/225 (50.67%), Query Frame = 0
Query:   68 AIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFI----------GVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISE 282
            A+ ++ A +FL  E+ QL++ G        EYFTD WN +D+     +F           GV   +  ++SL+A     I++  +W KLLYF+R FRSTG LI  I E++ DMR F V+LL+ ++ F +AF  +   +L  +E ++ + S   A  +                    +   +LG +D +     + P +  +L+L C L   I++LN+LI+IISE
Sbjct: 1336 AVVVLFATYFLSNEMVQLRNNG-------LEYFTDVWNYIDIIPPVGIFTISVMILMGANGVEINIHYQRSLIA-----IISFFMWMKLLYFLRIFRSTGYLIGMILEVIKDMRFFFVVLLITIIAFGSAFLTL---SLGNEEANQFTNSNVDAIIF--------------------TYRMILGDFDTEAFGEVATPTV-WILFLLCTLFNMIVMLNLLISIISE 1524          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A077ZT76_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZT76_STYLE)

HSP 1 Score: 85.1 bits (209), Expect = 7.840e-15
Identity = 71/217 (32.72%), Postives = 112/217 (51.61%), Query Frame = 0
Query:   72 VLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSL-----LADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSL-LWLACMLLVTIILLNVLIAIISE 282
            + A +FL  EL+QLQS          +YFTD WN +D+     +++ V + V     +     L     SIV   +WFK LYF+R ++ TG LI  IFE+++DMR F ++LL+ +V F ++F  I   A   Q+ +++ T+            G   S    +K +       LG ++ D+   G   V L++ L+L C +   I++LN+LIAIISE
Sbjct:  576 LFASYFLLNELKQLQSGS--------DYFTDLWNYIDIIPPIGIYVFVVSAVLNDYGIQYGEDLERSIQSIVTFFMWFKFLYFLRIYKRTGYLIRMIFEVISDMRYFFIVLLITIVAFGDSFLKI---ANANQDTEKRFTT------------GFIDSIIFTYKMI-------LGDFETDKF--GDVAVSLAMTLFLLCTIFNMIVMLNLLIAIISE 760          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: J9J443_9SPIT (WD-40 repeat protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J443_9SPIT)

HSP 1 Score: 84.3 bits (207), Expect = 1.550e-14
Identity = 70/212 (33.02%), Postives = 107/212 (50.47%), Query Frame = 0
Query:   71 LVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISE 282
            L+++ +FL  E++QL SQG        EY    WN  DL    ++ + V       K       +S+ +L +WFK LYF+R F+ TG LI  I E++ DM+ F V+L+VV+  F +AF +     L+    DE S   A A+ +                A+  S    LG + LDE D  +  +   +++L   +LV I++LN+LIAIISE
Sbjct: 1356 LLVSTYFLVTEVKQLFSQGI-------EYLFSIWNYFDLIPPIIIPLIVLQDFLRIKYDFQHSLHSVASLFMWFKFLYFLRIFKETGYLIRMIVEVVKDMKVFFVVLIVVLAAFGDAFLS-----LSNSSADE-SARFAGANFFT---------------ALLYSYRTSLGDFQLDEYDNNAQSLTTWIMFLFASILVLIVMLNLLIAIISE 1539          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A078AS47_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AS47_STYLE)

HSP 1 Score: 82.8 bits (203), Expect = 4.180e-14
Identity = 69/227 (30.40%), Postives = 112/227 (49.34%), Query Frame = 0
Query:   66 LQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLD----LSAYALLFIGVAAQV------STRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISE 282
            L A+ L+ A++F+  E+RQ   QG        +YF   WN +D    L  +A   I V ++       +T++S+      +I    +WFK LYF+R FRST  LI  IFE++ DMR F  +LL+ ++ F ++F +I   +    E D  + S   +  Y                    +   +LG ++ D+    + P L+ +L+L C +   I++LN+LIAIISE
Sbjct:  399 LLAVNLIFAVYFIHNEIRQFCLQGT-------KYFQSYWNYIDMIPPLGIFAFTIITVLSEYDYEIDEATKRSI-----QAITTFFMWFKFLYFLRIFRSTSYLITMIFEVIYDMRFFFAVLLITMIAFGDSFLSI---SYGNNELDRFTHSFTDSIIY--------------------TYRMILGDFETDKFGEVAKP-LVIILFLLCTIFNMIVMLNLLIAIISE 589          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: J9INY9_9SPIT (Ion_trans domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9INY9_9SPIT)

HSP 1 Score: 82.8 bits (203), Expect = 5.260e-14
Identity = 70/219 (31.96%), Postives = 109/219 (49.77%), Query Frame = 0
Query:   67 QAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGP--SPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLL-WLACMLLVTIILLNVLIAIISE 282
            + + ++L L+F   ELRQ+  QG      + +Y   PWN LD+    L+ I ++ +     +      N++    +W K LYF R FR T   I+ I  I++D+R F+V+ LV +  F N+ Y +        ECD    +   A   E+  AG        S + A R SL       D D  D GS  V+L+LL ++   L +TI++LN+LIA+IS+
Sbjct: 1574 KVLVIILTLYFFALELRQMFLQG------MGKYLGSPWNYLDIIPLVLISISMSFENLGIPANYERPCNAVACFFMWIKFLYFWRIFRQTSKFISMIVAIISDLRVFMVVFLVTLTAFGNSMYIMSNN---NPECD----AACEALPEEERPAGRFIGSLADSVFFAYRMSLG------DFDTTDLGSVYVVLALLTFVVATLFLTIMMLNILIAVISD 1773          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: A0A078A129_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A129_STYLE)

HSP 1 Score: 82.4 bits (202), Expect = 6.930e-14
Identity = 81/293 (27.65%), Postives = 134/293 (45.73%), Query Frame = 0
Query:    2 NSPALFDTASMAAAVEVHWQLYGRSGHIRSLGLYILL--ISDFVVCTIWFHALSFGTLAERITAW----ALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTN------SIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISE 282
            N   LF   S+ + ++  W L  R   I+ L +  +   ++  +   ++     FG      + W     L A+  + +++FL  E+RQ    G        +Y +  WN  D+    L+ + V+ +++T  +   +  N      S+  LL+W KLLYF+R FRSTG L+ T+ +++ DM+ FL+IL +V  GF  AF       L+E+   E       A C+                A R S+    G    D  D    PV L ++W+   +L  I++LN+LI+IISE
Sbjct: 1268 NDIELFSYRSIQSVIDYKWPL-AREYTIKVLFIPFIFYQLTFLIYSNVFCGQFQFGEDKYSDSWWIGHNVLAALLYLFSIYFLSNEIRQFYVTGI-------DYLSSVWNYSDILPPILIIVVVSLKLNTYYNEDYEPNNFIYTVHSVATLLMWIKLLYFLRIFRSTGYLVRTLTDVIYDMKVFLLILFIVYFGFGEAFLR-----LSEKSDPEMQFIQNYAYCWVY--------------AFRLSI----GDNATDTFDDTIQPVTLWIIWVIAGILTNIVMLNLLISIISE 1529          
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Match: J9F7S2_9SPIT (WD-40 repeat protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9F7S2_9SPIT)

HSP 1 Score: 82.4 bits (202), Expect = 6.950e-14
Identity = 83/283 (29.33%), Postives = 135/283 (47.70%), Query Frame = 0
Query:    6 LFDTASMAAAVEVHWQLYGRSGHIRSLGL-YILLISDFVVCTIWFHALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYFTDPWNLLDLSAYALL--FIGVAAQV---STRKSLLADCTNSIVALLLWFKLLYFMRPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQECDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDAGSAPVLLSLLWLACMLLVTIILLNVLIAIISE 282
            LF++ ++  A+E  W L  R   I+ L + +IL +S ++V   +   +   +    +  +      L  +L+F+  E+ QL+ +G        EY    WN LDL    LL  FI +AA     +     L  C  + ++L+LW K LYF+R F+STG LI  I E+  DMR FL+IL++  V F +A  +I      E   DE   ++     Y +              +V  +   +LG +D       + P +  +L++ C +   II+LN+L+AIISE
Sbjct: 1279 LFNSKAIRKAIEYKWPLT-REYTIKKLFIPFILFLSFYLVYMNYIFYMRETSDDWMLINYGFMVPLLFFSLYFVHNEITQLKHEG-------LEYLKSVWNYLDLIPPFLLMAFIPLAALGVFDNRGAPTLEACLQATMSLILWLKFLYFLRIFQSTGYLIRIIIEVCVDMRHFLLILVLTFVAFGDAMRSI--STSNEDVPDESGNTSQFVGSYVE--------------SVTFTYRMVLGDFDTSNFGQVALPYV-WILFILCTVFNMIIMLNLLVAIISE 1536          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161047 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKV9_9STRA3.450e-193100.00Ion transport protein-domain-containing protein n=... [more]
A0A836CMZ4_9STRA4.870e-2229.53Ion_trans domain-containing protein n=1 Tax=Tribon... [more]
A0A835YQC1_9STRA3.660e-1644.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
J9HTK9_9SPIT5.720e-1631.11WD-40 repeat protein n=1 Tax=Oxytricha trifallax T... [more]
A0A077ZT76_STYLE7.840e-1532.72Wd-40 repeat protein n=1 Tax=Stylonychia lemnae Ta... [more]
J9J443_9SPIT1.550e-1433.02WD-40 repeat protein n=1 Tax=Oxytricha trifallax T... [more]
A0A078AS47_STYLE4.180e-1430.40Wd-40 repeat protein n=1 Tax=Stylonychia lemnae Ta... [more]
J9INY9_9SPIT5.260e-1431.96Ion_trans domain-containing protein n=1 Tax=Oxytri... [more]
A0A078A129_STYLE6.930e-1427.65Wd-40 repeat protein n=1 Tax=Stylonychia lemnae Ta... [more]
J9F7S2_9SPIT6.950e-1429.33WD-40 repeat protein n=1 Tax=Oxytricha trifallax T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 42..282
e-value: 4.3E-20
score: 72.0
NoneNo IPR availablePANTHERPTHR10582:SF2INACTIVEcoord: 4..282
IPR024862Transient receptor potential cation channel subfamily VPANTHERPTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINcoord: 4..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_15contigContig_15:375037..377053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161047mRNA_3892Tribonema minus UTEX_B_3156 mRNAContig_15 375037..377053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|161047|e_gw1.15.133.1 ID=Trimin1|161047|e_gw1.15.133.1|Name=jgi.p|Trimin1|161047|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=284bp
LNSPALFDTASMAAAVEVHWQLYGRSGHIRSLGLYILLISDFVVCTIWFH
ALSFGTLAERITAWALQAIKLVLALWFLRKELRQLQSQGGPLKEQIQEYF
TDPWNLLDLSAYALLFIGVAAQVSTRKSLLADCTNSIVALLLWFKLLYFM
RPFRSTGPLINTIFEIMADMRTFLVILLVVVVGFANAFYAILGRALTEQE
CDEKSTSTARASCYEKLAAGPSPSFSSPWKAVRSSLSYMLGGYDLDELDA
GSAPVLLSLLWLACMLLVTIILLNVLIAIISER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR024862TRPV