Trimin1|161020|e_gw1.15.239.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|161020
Unique Name	Trimin1\|161020\|e_gw1.15.239.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	133

Homology

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A835Z9Y5_9STRA (UBC37-like protein, E2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y5_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.900e-93
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0

Query:    1 MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEIVS 132
            MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEIVS
Sbjct:    1 MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEIVS 132

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: D7FYD3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD3_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 2.900e-70
Identity = 98/130 (75.38%), Postives = 113/130 (86.92%), Query Frame = 0

Query:    1 MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            M+     RL KEL +L  +PPPG+CAWPV D +THLQAQ++GP+DTPY RG FLL++ +PD YPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSW PS+N+PTLLTTIR L+AHPNGDDGLMP+I
Sbjct:    1 MAGVGLVRLGKELKMLTDEPPPGVCAWPVDDCITHLQAQIQGPEDTPYERGTFLLELKIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWAPSMNVPTLLTTIRLLMAHPNGDDGLMPDI 130

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A067BXZ1_SAPPC (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXZ1_SAPPC)

HSP 1 Score: 196 bits (499), Expect = 1.630e-61
Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    8 RLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            R+RKEL +L TDPP GICAW V D L  LQAQ++GP+ TPY  G+FLL+I VP+ YPFEPPKV F TPI+HPNID+GGRICLDTLKM+P GSW PS+N+ TLLTTIR L+A PN DDGLMPEI
Sbjct:    7 RMRKELEMLETDPPHGICAWSVDDKLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A1V9Z8S0_9STRA (Ubiquitin-conjugating enzyme E2T-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8S0_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.950e-61
Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 0

Query:    8 RLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            R+RKEL +L +DPP GICAW V D L  LQAQ++GP+ TPY  G+FLL+I +P+ YPFEPPKV F+TPI+HPNID+GGRICLDTLKM+P GSW PS+N+ TLLTTIR L+A PN DDGLMPEI
Sbjct:    7 RMRKELEMLESDPPHGICAWSVDDKLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFITPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A6G0WGU0_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGU0_9STRA)

HSP 1 Score: 196 bits (498), Expect = 6.040e-61
Identity = 85/123 (69.11%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    8 RLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            R+R+E+ +L  DPP GICAWP GD L  L+AQ++GP+ TPY +G+FLL I +P+ YPFEPPKV FVTPIYHPNID+ GRICLDTLKM+P GSW PS+N+ TLLTTIR L+A PN DDGLMPEI
Sbjct:    7 RMRREIEMLENDPPHGICAWPKGDKLDELEAQIQGPEGTPYEKGVFLLQITIPERYPFEPPKVHFVTPIYHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A485LQ56_9STRA (Aste57867_24328 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQ56_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.420e-60
Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    8 RLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            R+RKEL +L  DPP G+CAW   D L  L+AQ++GP+ TPY +G+FLL I +P+ YPFEPPKV+FVTPI+HPNID+ GRICLDTLKM+P GSW PS+N+PTLLTTIR L+A PN DDGLMPEI
Sbjct:    7 RMRKELEMLENDPPHGVCAWSKDDKLDELEAQIQGPEGTPYEKGVFLLSITIPERYPFEPPKVQFVTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLPTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A024TYV3_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYV3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.320e-60
Identity = 85/124 (68.55%), Postives = 103/124 (83.06%), Query Frame = 0

Query:    7 ARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            AR+RKE+ +L  DPP GICAWP  + L  L+AQ++GP+ TPY +GIFLL IL+P+ YPFEPPKV+F TPI+HPNID+ GRICLDTLKM+P GSW PS+N+ TLLTTIR L+A PN DDGLMPEI
Sbjct:    6 ARMRKEMEMLENDPPHGICAWPKDNKLDELEAQIQGPEGTPYEKGIFLLSILIPERYPFEPPKVQFTTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A1V9YZW2_9STRA (Ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.110e-59
Identity = 83/123 (67.48%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    8 RLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            R+RKEL +L  DPP G+CAW + + L  LQAQ++GP+ TPY  G+FLL+I +P+ YPFEPPKV F+TPI+HPNID+GGRICLDTLKM+P GSW PS+N+ TLLTTIR L+A PN DDGLMPEI
Sbjct:    7 RMRKELEMLENDPPHGVCAWTIDEKLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFLTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: W4GEQ7_9STRA (UBC core domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEQ7_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.060e-59
Identity = 84/124 (67.74%), Postives = 102/124 (82.26%), Query Frame = 0

Query:    7 ARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            AR+RKE+ +L  DPP GICAWP  + L  L+AQ++GP+ TPY +GIFLL I +P+ YPFEPPKV+FVTPI+HPNID+ GRICLDTLKM+P GSW PS+N+ TLLTTIR L+  PN DDGLMPEI
Sbjct:    6 ARMRKEMEMLENDPPHGICAWPKDNKLDELEAQIQGPEGTPYEKGIFLLSITIPERYPFEPPKVQFVTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMTDPNPDDGLMPEI 129

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BLAST of jgi.p|Trimin1|161020 vs. uniprot
Match: A0A833WVC3_PHYIN (Ubiquitin-conjugating enzyme n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WVC3_PHYIN)

HSP 1 Score: 191 bits (486), Expect = 3.530e-59
Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = 0

Query:    1 MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
            M+A    R+RKE+++L +DPP G+ AWP  D + HL+AQ+ GPD +PY +G+F L+I +P+ YPFEPPKVRFVTPIYHPNID  GRICLDTLKM+P GSW PS+NI TLLTTIR L+  PN DDGLMPEI
Sbjct:    1 MAAAMRGRMRKEIAMLESDPPFGVSAWPKDDQIDHLEAQILGPDGSPYEKGVFQLEIEIPERYPFEPPKVRFVTPIYHPNIDDAGRICLDTLKMQPKGSWLPSVNISTLLTTIRLLMGEPNADDGLMPEI 130

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|161020 vs. uniprot

BLAST of jgi.p|Trimin1|161020 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z9Y5_9STRA	1.900e-93	100.00	UBC37-like protein, E2 n=1 Tax=Tribonema minus Tax...	[more]
D7FYD3_ECTSI	2.900e-70	75.38	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A067BXZ1_SAPPC	1.630e-61	71.54	UBC core domain-containing protein n=2 Tax=Saprole...	[more]
A0A1V9Z8S0_9STRA	3.950e-61	69.92	Ubiquitin-conjugating enzyme E2T-like n=1 Tax=Achl...	[more]
A0A6G0WGU0_9STRA	6.040e-61	69.11	UBC core domain-containing protein n=1 Tax=Aphanom...	[more]
A0A485LQ56_9STRA	2.420e-60	68.29	Aste57867_24328 protein n=1 Tax=Aphanomyces stella...	[more]
A0A024TYV3_9STRA	3.320e-60	68.55	UBC core domain-containing protein n=1 Tax=Aphanom...	[more]
A0A1V9YZW2_9STRA	1.110e-59	67.48	Ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Thr...	[more]
W4GEQ7_9STRA	3.060e-59	67.74	UBC core domain-containing protein n=2 Tax=Aphanom...	[more]
A0A833WVC3_PHYIN	3.530e-59	65.38	Ubiquitin-conjugating enzyme n=2 Tax=Phytophthora ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..132 e-value: 1.1E-31 score: 121.2
None	No IPR available	PANTHER	PTHR24068:SF278	UBIQUITIN-CONJUGATING ENZYME E2 T	coord: 6..132
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 6..132
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..130 e-value: 3.3E-35 score: 120.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 4..132 score: 43.755554
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 8..130 e-value: 4.45785E-51 score: 156.979
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..132 e-value: 1.5E-47 score: 164.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..130
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 77..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_15	contig	Contig_15:1442287..1443083 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161020	mRNA_4024	Tribonema minus UTEX_B_3156	mRNA	Contig_15 1442287..1443083 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|161020|e_gw1.15.239.1 ID=Trimin1|161020|e_gw1.15.239.1|Name=jgi.p|Trimin1|161020|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MSATAAARLRKELSLLATDPPPGICAWPVGDSLTHLQAQVEGPDDTPYAR
GIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSW
TPSINIPTLLTTIRTLIAHPNGDDGLMPEIVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS