Trimin1|158030|e_gw1.4.382.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|158030
Unique Name	Trimin1\|158030\|e_gw1.4.382.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	371

Homology

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA)

HSP 1 Score: 612 bits (1577), Expect = 4.430e-219
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0

Query:    1 SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXRLGRGAPPAQPPVPVALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRYTEAEDREAQPQQQQVRQVGSLRSGSCLLKFAVDKSSRTVEALLNFAGVFETHGA 370
            SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXRLGRGAPPAQPPVPVALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRYTEAEDREAQPQQQQVRQVGSLRSGSCLLKFAVDKSSRTVEALLNFAGVFETHGA
Sbjct:    1 SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXRLGRGAPPAQPPVPVALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRYTEAEDREAQPQQQQVRQVGSLRSGSCLLKFAVDKSSRTVEALLNFAGVFETHGA 370

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 5.900e-59
Identity = 141/359 (39.28%), Postives = 179/359 (49.86%), Query Frame = 0

Query:    9 AVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG-----CSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDG--PAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXR-----LGRGAPPAQPPVPVAL-SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRYTEAEDREAQPQQQQVRQVGSLRSGSCLLKFAVDKSSRT 354
            AVEL     L SVVCCVRFS DG+++A GSH CVKVFDV +      C                 DPYVR+VC SPDG  + A ME NSA+VL L E+G     + L GH+SEVYSLDWV  +IA+GSGD ++R+WDS +GAC+  LGD  GP DGVT V  R D +++AAASID  VHVW+T    +L+RLD H+ES                               LG G+     P    L  G                             D  + +R   + GF+NS+IGV   P   +FATG GD +VC+W Y + +D   Q +   V    S RS S        +SSR+
Sbjct:  475 AVELAKSQDLRSVVCCVRFSTDGTKIAAGSHSCVKVFDVNSFKQLYVCRKQVQEEQGAPQTADGGDPYVRAVCFSPDGLSIVAGMEKNSAKVLVLEEEGGRQGAITLSGHESEVYSLDWVSDMIASGSGDGRIRLWDSVTGACKASLGDMGGPQDGVTSVVLRQDTTMVAAASIDRVVHVWSTQTHKILHRLDGHSESVYAITFSADGNRLVSGGLDKTIKASAEMVWDLGPGSEGRLSPQAKTLPGGHKDYVLSVCFSQDGKYIISGSKDRSVTMWDARLMKRVATITGFKNSVIGVSASPFNSMFATGSGDNLVCVWNYGDRDDYRRQSESA-VAPASSGRSSSAEKPRPPSRSSRS 832

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A6G0XPL3_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPL3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.810e-43
Identity = 165/319 (51.72%), Postives = 208/319 (65.20%), Query Frame = 0

Query:    4 DARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLV----PLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXRLGR-GAPPAQPPVPVALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRY 316
            D  RP VE+   L   SVVCCVRFS DG++LA+G H   +VFDV TG        P +     P    +D YVR+VC SPDG+++ A M  N+ R+  +  +  AP  LVGH +E+YSLD+V   I +GSGD +VR+WD+ +G C+ + G +S GP DGVT VA  PDG L+AAAS+D  V +W T    L+ RL+ H   XXXXXXXXXXXXXXXXXXXXXXXXX +   G    +P +      XXXXXXXXXXXXXXXXXXXXXXXXXXXX  TA  R  + ++G++NS+I V + P    FATG GD   C+W+Y
Sbjct:  442 DPERPVVEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPAVSGNAQPANEAEDAYVRAVCFSPDGKKLVAGMPQNTIRIWDMESNEEAP-PLVGHDAEIYSLDYVNNFIVSGSGDRKVRLWDARTGQCQAIFGNESGGPADGVTNVALSPDGRLLAAASLDKVVRIWDTQTTQLMDRLEGHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASGRTTTRPRMLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTA--RSVLTVSGYRNSVINVHSSPASPHFATGSGDCFACIWKY 757

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A024UU52_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU52_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.530e-43
Identity = 94/198 (47.47%), Postives = 123/198 (62.12%), Query Frame = 0

Query:    4 DARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSP----APPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            D  RP VE+   L   SVVCCVRFS DG++LATG H   +VFDV TG        P       P    +D YVR+VC SPDG ++ A M  N+ R+  +  +  AP  L+GH +E+YSLD+VG  I +GSGD +VR+WD+ +G C+ V G +S GP+DGVT VA  PDG L+AAAS+D  V +W T    L+ RL+ H
Sbjct:  400 DTERPVVEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRIWDMASNEEAP-PLIGHDAEIYSLDYVGNHIVSGSGDRKVRLWDARTGQCQAVFGNESGGPSDGVTNVALSPDGRLLAAASLDKVVRIWDTQTTELMDRLEGH 596

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A485LC03_9STRA (Aste57867_18943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC03_9STRA)

HSP 1 Score: 169 bits (428), Expect = 6.000e-43
Identity = 161/318 (50.63%), Postives = 206/318 (64.78%), Query Frame = 0

Query:    4 DARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSP----APPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESXXXXXXXXXXXXXXXXXXXXXXXXXRLGRGAPPAQPPVPVALSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTAVQRRAVVLAGFQNSIIGVGTCPNQRLFATGGGDKVVCLWRY 316
            +  RPAVE+   L   SVVCCVRFS DG++LA+G H   +VFDV TG        P +   +      +D YVR+VC SPDG ++ A M  N+ R+  +  +  AP  L+GH++E+YSLD+V   I +GSGD +VR+WD+ +G C+ + G +S GP DGVT VA  PDG L+AAAS+D  V +W T    L+ RL+ H   XXXXXXXXXXXXXXXXXXXXXXXXX +         P  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R  + ++G++NS+I V + P    FATG GD   C+W+Y
Sbjct:  488 EPERPAVEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPANGANVTQANETEDAYVRAVCFSPDGTKLVAGMPQNTIRIWDMASNEEAP-PLIGHEAEIYSLDYVNNFIVSGSGDRKVRLWDARTGQCQAIFGNESGGPADGVTNVALSPDGRLLAAASLDKVVRIWDTQTTQLMDRLEGHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASGRTTTRPRSL-FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTTRSVLTVSGYRNSVINVHSSPASPYFATGSGDCFACIWKY 803

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A418BA83_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA83_9STRA)

HSP 1 Score: 169 bits (429), Expect = 8.350e-43
Identity = 94/198 (47.47%), Postives = 123/198 (62.12%), Query Frame = 0

Query:    4 DARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSP----APPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            D  RP VE+   L   SVVCCVRFS DG++LATG H   +VFDV TG        P       P    +D YVR+VC SPDG ++ A M  N+ R+  +  +  AP  L+GH +E+YSLD+VG  I +GSGD +VR+WD+ +G C+ V G +S GP+DGVT VA  PDG L+AAAS+D  V +W T    L+ RL+ H
Sbjct: 1219 DTERPVVEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRIWDMASNEEAP-PLIGHDAEIYSLDYVGNHIVSGSGDRKVRLWDARTGQCQAVFGNESGGPSDGVTNVALSPDGRLLAAASLDKVVRIWDTQTTELMDRLEGH 1415

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A329SF69_9STRA (General transcriptional corepressor n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SF69_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.490e-42
Identity = 95/209 (45.45%), Postives = 127/209 (60.77%), Query Frame = 0

Query:    1 SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG------CSPAPPSPPPL----VPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLM--EDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            S +++ RPA E+   +   SVVCCVRFS DG+ +A+G H   +VFDV TG        PA     P          P D YVR+VC SPD  ++ A M  N+ RV  +   E+GPA   + GH+SE+YSLD+V  LI +GSGD +VR+WD+ +G C+ + G +S GP+DGVT VA  PDG L+AAAS+D  V +W T    LL RL+ H
Sbjct:  146 SYQESERPAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPDDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGPA---MTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSVALSPDGRLLAAASLDKVVRIWDTETAQLLDRLEGH 351

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A067CVT3_SAPPC (Tup_N domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVT3_SAPPC)

HSP 1 Score: 167 bits (423), Expect = 2.030e-42
Identity = 97/202 (48.02%), Postives = 127/202 (62.87%), Query Frame = 0

Query:    4 DARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCS------PAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLM--EDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            +  RP VE+   L   SVVCCVRFS DG+++A+G H   +VFDVATG        PA  +     P    +D YVRSVC SPDG ++ A M  N+ R+  +   E+GP    LVGH++E+YSLD+V  LI +GSGD +VR+WD+ SG CR V G ++ GP DGVT VA  PDG L+AAAS+D  V +W T    L+ RL+ H
Sbjct:  424 ETERPTVEMHHTLDHQSVVCCVRFSADGTKMASGCHKTAQVFDVATGARTFWVQRPAITNANGAQPNEN-EDAYVRSVCFSPDGTKLVAGMPQNTIRIWDIASNEEGPP---LVGHEAEIYSLDYVNNLIVSGSGDRKVRLWDARSGECRHVFGTETGGPADGVTNVALSPDGRLLAAASLDKVVRIWNTETSQLMDRLEGH 621

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A0W8D732_PHYNI (Flavoprotein YCP4 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D732_PHYNI)

HSP 1 Score: 163 bits (413), Expect = 2.420e-41
Identity = 95/209 (45.45%), Postives = 126/209 (60.29%), Query Frame = 0

Query:    1 SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG------CSPAPPSPPPL----VPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLM--EDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            S +++ RPA E+   +   SVVCCVRFS DG+ +A+G H   +VFDV TG        PA     P          P D YVR+VC SPD  ++ A M  N+ RV  +   E+GPA   + GH+SE+YSLD+V  LI +GSGD +VR+WD  +G C+ + G +S GP+DGVT VA  PDG L+AAAS+D  V +W T    LL RL+ H
Sbjct:  361 SYQESERPAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPDDAYVRAVCFSPDCSKLVAGMPQNTIRVWDIASNEEGPA---MTGHESEIYSLDYVNDLIVSGSGDRKVRLWDPRNGQCKKIFGNESGGPSDGVTSVALSPDGRLLAAASLDKVVRIWDTETAQLLDRLEGH 566

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BLAST of jgi.p|Trimin1|158030 vs. uniprot
Match: A0A484DZ53_BRELC (Tup_N domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ53_BRELC)

HSP 1 Score: 163 bits (413), Expect = 4.280e-41
Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 0

Query:    1 SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG------CSPA----PPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLM--EDGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLG-DSRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSH 196
            S +++ RPA E+   +   SVVCCVRFS DG+ +A+G H   +VFDV TG        PA     P+         P D YVR+VC SPD  ++ A M  N+ R+  +   E+GPA   + GH+SE+YSLD+V  LI +GSGD +VR+WD+ +G C+ + G +S GP+DGVT VA  PDG L+AAAS+D  V +W T    LL RL+ H
Sbjct:  400 SYQESERPAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGHTPTSQTNTAANEPDDAYVRAVCFSPDCTKLVAGMPQNTIRIWDIASNEEGPA---MTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSVALSPDGRLLAAASLDKVVRIWDTETAQLLDRLEGH 605

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|158030 vs. uniprot

BLAST of jgi.p|Trimin1|158030 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z1H0_9STRA	4.430e-219	100.00	TUP1-like protein (Fragment) n=1 Tax=Tribonema min...	[more]
D8LEC5_ECTSI	5.900e-59	39.28	Tup_N domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6G0XPL3_9STRA	1.810e-43	51.72	Tup_N domain-containing protein n=1 Tax=Aphanomyce...	[more]
A0A024UU52_9STRA	2.530e-43	47.47	Tup_N domain-containing protein n=1 Tax=Aphanomyce...	[more]
A0A485LC03_9STRA	6.000e-43	50.63	Aste57867_18943 protein n=1 Tax=Aphanomyces stella...	[more]
A0A418BA83_9STRA	8.350e-43	47.47	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A329SF69_9STRA	1.490e-42	45.45	General transcriptional corepressor n=1 Tax=Phytop...	[more]
A0A067CVT3_SAPPC	2.030e-42	48.02	Tup_N domain-containing protein n=4 Tax=Saprolegni...	[more]
A0A0W8D732_PHYNI	2.420e-41	45.45	Flavoprotein YCP4 n=1 Tax=Phytophthora nicotianae ...	[more]
A0A484DZ53_BRELC	4.280e-41	44.98	Tup_N domain-containing protein n=1 Tax=Bremia lac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 260..274 score: 35.98 coord: 125..139 score: 36.05 coord: 212..226 score: 36.05
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 186..225 e-value: 1.8E-8 score: 44.2 coord: 234..273 e-value: 2.3E-8 score: 43.8 coord: 57..97 e-value: 20.0 score: 8.7 coord: 276..315 e-value: 0.062 score: 22.4 coord: 9..46 e-value: 0.014 score: 24.5 coord: 141..183 e-value: 5.8E-7 score: 39.1 coord: 101..138 e-value: 1.3E-4 score: 31.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 241..273 e-value: 1.3E-6 score: 29.0 coord: 190..224 e-value: 6.2E-6 score: 26.8 coord: 153..182 e-value: 3.3E-5 score: 24.5 coord: 108..138 e-value: 1.9E-4 score: 22.2 coord: 20..46 e-value: 0.0013 score: 19.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 283..324 score: 8.870959
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 241..273 score: 14.251289
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 108..147 score: 12.246197
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 193..226 score: 15.35409
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 151..192 score: 11.845179
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 3..321 e-value: 6.3E-88 score: 297.0
None	No IPR available	PANTHER	PTHR19848:SF4	F-BOX AND WD REPEAT DOMAIN CONTAINING 7	coord: 20..334
None	No IPR available	PANTHER	PTHR19848	WD40 REPEAT PROTEIN	coord: 20..334
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 241..273 score: 11.787407
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 193..226 score: 12.657402
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 151..182 score: 9.810144
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 108..142 score: 9.757418
None	No IPR available	CDD	cd00200	WD40	coord: 20..315 e-value: 1.11716E-57 score: 187.542
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 125..139
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 20..314

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:336347..340436 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158030	mRNA_1573	Tribonema minus UTEX_B_3156	mRNA	Contig_4 336347..340436 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|158030|e_gw1.4.382.1 ID=Trimin1|158030|e_gw1.4.382.1|Name=jgi.p|Trimin1|158030|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=371bp
SGKDARRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG
CSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLME
DGPAPLDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGD
SRGPTDGVTCVAFRPDGSLIAAASIDTTVHVWATADGGLLYRLDSHTESV
YSVAFSADGAQLVSGGLDRTIQVWRLGRGAPPAQPPVPVALSGHQDYVLS
VCCSDDGRYIISGSKDSTVVMWDTAVQRRAVVLAGFQNSIIGVGTCPNQR
LFATGGGDKVVCLWRYTEAEDREAQPQQQQVRQVGSLRSGSCLLKFAVDK
SSRTVEALLNFAGVFETHGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020472	G-protein_beta_WD-40_rep
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR019775	WD40_repeat_CS
IPR036322	WD40_repeat_dom_sf