Trimin1|157061|e_gw1.2.76.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|157061
Unique NameTrimin1|157061|e_gw1.2.76.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length203
Homology
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BLAST of jgi.p|Trimin1|157061 vs. uniprot
Match: A0A836CI12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI12_9STRA)

HSP 1 Score: 213 bits (541), Expect = 7.150e-67
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 
Query:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLEELDCQGNARLDMVPAPFRGERAGACAHRGDLAQCAARDMDAEHETLDK 202
            MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLEELDCQGNARLDMVPAPFRGERAGACAHRGDLAQCAARDMDAEHETLDK
Sbjct:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLEELDCQGNARLDMVPAPFRGERAGACAHRGDLAQCAARDMDAEHETLDK 202
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BLAST of jgi.p|Trimin1|157061 vs. uniprot
Match: A0A7S2V5X2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5X2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.810e-19
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64
            MEE+D+LI HPD  GCLDL HR WV LD  +WT + EL +LNI+FNNI  +PP +G L LLR+L
Sbjct:    1 MEEFDDLIQHPDDKGCLDLAHRGWVTLDDAVWTMNYELFILNISFNNITAVPPRIGDLNLLREL 64
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BLAST of jgi.p|Trimin1|157061 vs. uniprot
Match: A0A7R9YGJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGJ9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.610e-16
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0 
Query:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64
            MEE+D+LIP PD  G  DL HR W  +DSV+WT   ELL L+++FN IE LPP++G L LLR L
Sbjct:    1 MEEFDDLIPQPDADGSCDLAHRGWKVVDSVIWTLGAELLHLDLSFNRIEALPPDVGGLFLLRTL 64
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BLAST of jgi.p|Trimin1|157061 vs. uniprot
Match: A0A7S3GQP2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQP2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.190e-11
Identity = 27/64 (42.19%), Postives = 50/64 (78.12%), Query Frame = 0 
Query:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64
            MEE DEL+P+ D  G L++++R+WV LD ++WT S +++ L++++N+I  +PP++G L ++R+L
Sbjct:    1 MEEDDELVPNADDRGFLNISNRAWVNLDPIIWTMSLKIVKLDMSYNHIVEIPPQIGELVVMREL 64
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BLAST of jgi.p|Trimin1|157061 vs. uniprot
Match: D7FT92_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT92_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.110e-10
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64
            MEE DEL+PHPD  G L+LT R              EL+VLN++FNNIE LPPELG L LL++L
Sbjct:    1 MEEVDELVPHPDSNGLLNLTKR--------------ELIVLNVSFNNIEYLPPELGDLVLLKEL 50
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157061 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CI12_9STRA7.150e-67100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V5X2_9STRA1.810e-1960.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YGJ9_9STRA6.610e-1657.81Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3GQP2_9STRA1.190e-1142.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D7FT92_ECTSI2.110e-1054.69Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 36..57
e-value: 240.0
score: 1.9
coord: 127..150
e-value: 5.7
score: 15.3
coord: 58..81
e-value: 8.0
score: 14.0
coord: 82..104
e-value: 74.0
score: 6.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 8..176
e-value: 1.6E-38
score: 134.0
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 38..94
e-value: 1.4E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 36..169
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 17..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:886927..887726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157061mRNA_627Tribonema minus UTEX_B_3156 mRNAContig_2 886927..887726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|157061|e_gw1.2.76.1 ID=Trimin1|157061|e_gw1.2.76.1|Name=jgi.p|Trimin1|157061|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=203bp
MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIER
LPPELGHLTLLRDLNCSCNKLSSLPAEIGKCTRLRTLKANGNRLTEIPQT
LAQCVLLDTLVLSENKLRGVPAALGSLQGLRVVRLGNNDLNYLPHQIGTM
PSLEELDCQGNARLDMVPAPFRGERAGACAHRGDLAQCAARDMDAEHETL
DK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt