Trimin1|157030|e_gw1.2.21.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|157030
Unique NameTrimin1|157030|e_gw1.2.21.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length150
Homology
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A835Z3Q6_9STRA (HNHc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q6_9STRA)

HSP 1 Score: 319 bits (818), Expect = 9.710e-111
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query:    1 MVDAEQHWCVRAHPSAFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQHGRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATGPCYNRREQQARARDGTLPPPPRTHVLSQRDEDTDVSV 149
            MVDAEQHWCVRAHPSAFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQHGRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATGPCYNRREQQARARDGTLPPPPRTHVLSQRDEDTDVSV
Sbjct:    1 MVDAEQHWCVRAHPSAFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQHGRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATGPCYNRREQQARARDGTLPPPPRTHVLSQRDEDTDVSV 149          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A835Z5J3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.430e-36
Identity = 67/104 (64.42%), Postives = 79/104 (75.96%), Query Frame = 0
Query:   16 AFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQH-GRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATGPCYNRR 118
            AF+ G  GYSVSQFGGWV+ PTG+ S GH+++ GR  I IG   Y V+RLVA  HL P DDP KT+VNH+DGNPSN+++ NLEWVT GEN RHA ATG C NRR
Sbjct:  190 AFINGAVGYSVSQFGGWVKLPTGRLSQGHKRYDGRRKIGIGTNVYLVYRLVASAHLAPADDPTKTMVNHIDGNPSNSNYRNLEWVTAGENIRHAQATGLCKNRR 293          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A835YZ13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ13_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.980e-25
Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 0
Query:   16 AFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQHG-RHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFT 94
            AF+ G  GYSVSQFGGWV+ PTG+ S GH+++  RH+I IG K Y V+RLVA  HL P DDP KT+VNH+DGN SN+D+T
Sbjct:  148 AFINGAVGYSVSQFGGWVKLPTGKLSQGHKRYDTRHTIGIGNKSYLVYRLVASAHLAPPDDPTKTMVNHIDGNASNSDYT 227          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A835YM77_9STRA (HNHc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM77_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.590e-15
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   71 PPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATGPCYNRR 118
            PP DDPNKT+VNH+D NP NN+FTNLEWVT G N+RH H T  C  RR
Sbjct:    1 PPADDPNKTMVNHIDSNPRNNEFTNLEWVTAGGNSRHTHTTRLCSKRR 48          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A812ILR6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ILR6_9DINO)

HSP 1 Score: 72.4 bits (176), Expect = 4.670e-12
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   31 GWVQFPTGQFSNGHQQ-HGRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHAT 111
            G V   TG+  NG+    G     IGGK Y VHRLVA   L P  DPN   VNH+DG+PSNN  +NL++VT  EN RH+ AT
Sbjct:   41 GRVSNTTGKVHNGYLTCSGYRKARIGGKLYNVHRLVAAAFLGPPADPNCWQVNHLDGDPSNNHLSNLQYVTPAENQRHSWAT 122          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: UPI000AC1197C (HNH endonuclease n=1 Tax=Neglectibacter timonensis TaxID=1776382 RepID=UPI000AC1197C)

HSP 1 Score: 70.1 bits (170), Expect = 1.470e-11
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   57 KHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATG 112
            KH+YVHRLVA   +P  +  N  +VNH+DGNPSNND TNLEW T  EN +HA+ TG
Sbjct:   53 KHFYVHRLVAEAFIP--NPYNLPMVNHLDGNPSNNDVTNLEWCTAKENVQHAYRTG 106          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: UPI001952826D (helix-turn-helix domain-containing protein n=2 Tax=Mammaliicoccus sciuri TaxID=1296 RepID=UPI001952826D)

HSP 1 Score: 69.7 bits (169), Expect = 2.620e-11
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   57 KHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATG 112
            KH+YVHRL+A   +P  +  NK  VNH DGNPSNND  NLEWVT  EN +HA+ TG
Sbjct:   60 KHFYVHRLLAQAFIP--NPLNKPQVNHKDGNPSNNDLNNLEWVTASENVQHAYDTG 113          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A2H4FQU5_9CAUD (HNH endonuclease n=32 Tax=root TaxID=1 RepID=A0A2H4FQU5_9CAUD)

HSP 1 Score: 66.6 bits (161), Expect = 1.080e-10
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   31 GWVQFPTGQFSNGHQQHGRHSIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATG 112
            G  Q   G++       GR    IG K  + HR+VA T LP  +  NK  VNH+DGNP NN+  NLEW T  EN +HA+ATG
Sbjct:   36 GSTQLRKGRWLKPKINQGRVLYNIGAKWTFAHRIVAMTFLPNPE--NKPQVNHIDGNPLNNNVNNLEWCTQSENIKHAYATG 115          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: A0A8F0WBL5_9CAUD (Uncharacterized protein n=1 Tax=CrAss-like virus sp. TaxID=2831617 RepID=A0A8F0WBL5_9CAUD)

HSP 1 Score: 65.5 bits (158), Expect = 1.790e-10
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   52 IMIGGKHYY--VHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATG 112
            + + G  YY  VHRLVA T++P  D  NK +VNH DGN SNN +TNLEWV+  ENN HA   G
Sbjct:   42 LNVEGNVYYKRVHRLVAETYIPNPD--NKLMVNHKDGNKSNNHYTNLEWVSGSENNIHAIRNG 102          
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Match: UPI001F0B9423 (HNH endonuclease n=1 Tax=Bacillus albus TaxID=2026189 RepID=UPI001F0B9423)

HSP 1 Score: 63.5 bits (153), Expect = 4.950e-10
Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   57 KHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVTTGENNRHAHATG 112
            KH  VHRLVA   +P  +   K  VNH DGN +NND +NLEWVT  EN +HAH TG
Sbjct:   11 KHIAVHRLVAKAFIP--NPAGKPQVNHKDGNKTNNDISNLEWVTASENIKHAHVTG 64          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157030 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3Q6_9STRA9.710e-111100.00HNHc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z5J3_9STRA2.430e-3664.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ13_9STRA9.980e-2562.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YM77_9STRA5.590e-1568.75HNHc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A812ILR6_9DINO4.670e-1251.22Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
UPI000AC1197C1.470e-1160.71HNH endonuclease n=1 Tax=Neglectibacter timonensis... [more]
UPI001952826D2.620e-1160.71helix-turn-helix domain-containing protein n=2 Tax... [more]
A0A2H4FQU5_9CAUD1.080e-1046.34HNH endonuclease n=32 Tax=root TaxID=1 RepID=A0A2H... [more]
A0A8F0WBL5_9CAUD1.790e-1055.56Uncharacterized protein n=1 Tax=CrAss-like virus s... [more]
UPI001F0B94234.950e-1057.14HNH endonuclease n=1 Tax=Bacillus albus TaxID=2026... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleasePFAMPF13392HNH_3coord: 59..106
e-value: 2.6E-10
score: 39.9
NoneNo IPR availableGENE3D3.90.75.20coord: 17..113
e-value: 1.1E-21
score: 79.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..149
IPR044925His-Me finger superfamilySUPERFAMILY54060His-Me finger endonucleasescoord: 30..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:699155..699604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157030mRNA_601Tribonema minus UTEX_B_3156 mRNAContig_2 699155..699604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|157030|e_gw1.2.21.1 ID=Trimin1|157030|e_gw1.2.21.1|Name=jgi.p|Trimin1|157030|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=150bp
MVDAEQHWCVRAHPSAFVGGVSGYSVSQFGGWVQFPTGQFSNGHQQHGRH
SIMIGGKHYYVHRLVAHTHLPPTDDPNKTIVNHMDGNPSNNDFTNLEWVT
TGENNRHAHATGPCYNRREQQARARDGTLPPPPRTHVLSQRDEDTDVSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR044925His-Me_finger_sf