Trimin1|156973|e_gw1.2.138.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156973
Unique NameTrimin1|156973|e_gw1.2.138.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length194
Homology
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A835ZCH7_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH7_9STRA)

HSP 1 Score: 384 bits (987), Expect = 4.650e-135
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query:    1 MSIVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPCCDY 193
            MSIVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPCCDY
Sbjct:    1 MSIVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPCCDY 193          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A835Z5Q4_9STRA (Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q4_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.920e-64
Identity = 105/184 (57.07%), Postives = 129/184 (70.11%), Query Frame = 0
Query:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSF 187
            VGVDEVGRGCL+G V AAA+ LPETFPD+G+  IKDSKKLS +KRA +D YI+ HAIA  +G A   EID  NI  AT LAMHRAL+Q+  Q  I+ I VDGN F  Y     EC+V GD    SI+AASI+AKV+RD +M+  V  +P L  Y +  N GY T+ H++AI QHG+T+ HRKSF
Sbjct:    4 VGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 187          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A836CBR9_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.240e-62
Identity = 106/185 (57.30%), Postives = 128/185 (69.19%), Query Frame = 0
Query:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFK 188
            VGVDEVGRGCL G V AAA++LP T+PDEG+  IKDSKKLSAKKR +M  YIK +A+AY +G+AS  EID  NI  A  LAMHRAL+Q+        I VDG  F  Y+   HECIV GD+   SI+AASI+AK +RD  M E V   P L VY++  N GYGT  H++ I +HGIT+ HRKSFK
Sbjct:    3 VGVDEVGRGCLLGFVAAAAVILPSTYPDEGWMGIKDSKKLSAKKREQMATYIKNNALAYGIGTASVQEIDEHNILQAVMLAMHRALDQVA--IPFESIAVDGTYFNPYRDVPHECIVKGDSTILSIAAASIIAKEFRDNAMRELVHELPDLAVYDICNNMGYGTPAHIEGIRRHGITDHHRKSFK 185          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A6C0I969_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I969_9ZZZZ)

HSP 1 Score: 182 bits (462), Expect = 6.650e-55
Identity = 98/195 (50.26%), Postives = 128/195 (65.64%), Query Frame = 0
Query:    3 IVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKY-------KHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPC 190
            + GVDEV RG   G V AA +VLP  FPD+ YK+IKDSKKLS  KR  +  YI+ +AI Y VGSAS  EID++NI NAT  AMHRA+++  ++    K+++DG  F  Y       +  E+ECI  GD  Y SI+AASI+AK Y  TL+ +  +  P LN+Y++ KNKGYGT  H+ AI QHGIT  HR++F  C
Sbjct:   15 VAGVDEVARGTFVGPVIAACVVLPHVFPDDTYKEIKDSKKLSKNKREFLAEYIRNNAITYGVGSASVEEIDSVNILNATMKAMHRAVDEAYKKHPFEKLLIDGQYFKGYTPPGLDSEILEYECIPKGDMHYLSIAAASIIAKDYHTTLIYKMTEEHPELNLYDIKKNKGYGTAKHIAAINQHGITSFHRRTFGIC 209          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A6C0KWF9_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KWF9_9ZZZZ)

HSP 1 Score: 181 bits (460), Expect = 1.110e-54
Identity = 101/193 (52.33%), Postives = 131/193 (67.88%), Query Frame = 0
Query:    4 VGVDEVGRGCLYGCVTAAAMVL-PETFPDEG-YKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIM-----VDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKP 189
            +GVDEVGRG L+G V AAA++L P +  + G Y+ I DSKK+S KKR K+  +I + A+A  +G ASAAEID +NI  AT+LAMHRAL+ I   T+   I+     VDGN+F  YK  ++EC+V GDA Y SI+AASI+AKVYRD  + E V  +  L +Y+L  NKGYGT  H+ A+  HG  E HR SFKP
Sbjct:   11 IGVDEVGRGTLFGPVVAAAVILAPISDANSGEYEKIMDSKKISEKKREKIATFIHKEALAVGIGMASAAEIDEINILQATYLAMHRALDNIAANTANTNIVYDLIRVDGNKFKPYKDKKYECVVQGDAKYLSIAAASIVAKVYRDNFILENVATNSNLKIYDLQNNKGYGTAKHLAALKTHGPVEGHRFSFKP 203          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A6C0CF59_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CF59_9ZZZZ)

HSP 1 Score: 179 bits (453), Expect = 1.240e-53
Identity = 95/192 (49.48%), Postives = 124/192 (64.58%), Query Frame = 0
Query:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYK-----HYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPC 190
            VG+DE GRGCL+G VT AA++ P   PD    +IKDSKK+  KKR  +  YI+ +AIA++V      EID LNI  AT   MH+ +++I +Q  I  I+VDGN F  Y      +  HEC++ GD  YKSI+AASILAK +RD  + E  K +  L  Y ++KNKGYGTK HMDA+ ++G T  HR SFKPC
Sbjct:   13 VGIDEAGRGCLFGPVTVAAVIWPHEDPDPNL-EIKDSKKVGEKKRLILKDYIENNAIAWSVQFIPHEEIDKLNILQATMKGMHKCIDEIREQLEIDTILVDGNSFKMYTDENLDYLNHECVINGDNTYKSIAAASILAKTHRDNYIIELSKNNSELEKYGISKNKGYGTKIHMDALKEYGSTNGHRMSFKPC 203          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: UPI001C73E814 (Ribonuclease HII n=1 Tax=Cryomorphaceae bacterium CECT 30217 TaxID=2829795 RepID=UPI001C73E814)

HSP 1 Score: 176 bits (447), Expect = 8.060e-53
Identity = 98/184 (53.26%), Postives = 129/184 (70.11%), Query Frame = 0
Query:    5 GVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFK 188
            G DE GRGCL G V AAA+VLP+ F ++    + DSKKLS K+R ++   +++ A+A+AVG  S  EID +NI NA+FLAMHRAL+Q++  TS  +I+VDGNRF  Y + +H CI+ GD  Y SI+AASILAK YRD +M+E  +A P    Y+  KN GY TK H +AI +HGI E HRKSF+
Sbjct:   14 GCDEAGRGCLAGPVVAAAVVLPDNFSNDL---LNDSKKLSEKQRYQLRPIVEQEALAHAVGIVSHEEIDEINILNASFLAMHRALDQLK--TSFDEILVDGNRFNPYHNKKHHCIIKGDGKYLSIAAASILAKTYRDDIMKELHEAYP---FYDWHKNMGYPTKKHREAIREHGINEHHRKSFR 189          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A6C0J237_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0J237_9ZZZZ)

HSP 1 Score: 177 bits (448), Expect = 8.740e-53
Identity = 98/195 (50.26%), Postives = 125/195 (64.10%), Query Frame = 0
Query:    3 IVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKY-------KHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPC 190
            I GVDE  RG L   V AA +V P +F DE YK IKDSKKLSAKKR ++  YIK+ AI Y +G+AS  EID  NI  AT  AM+RA+ +  ++ S  KI++DG  F  Y       +   HECI+ GDA Y +I+AASILAK Y DT   E +  +P L  Y+L  N+GYGT  H+ AI ++GIT+ HRK+F PC
Sbjct:   14 IAGVDESNRGGLIYDVVAACVVFPNSFDDEKYKAIKDSKKLSAKKRRELAEYIKQTAITYGIGTASREEIDNSNILKATMKAMYRAINEAYKKHSFQKILIDGTHFNGYIPPGIDSEALPHECIIKGDAKYLNIAAASILAKDYHDTSFIELIDKNPELEKYDLRNNQGYGTPKHLAAIKKYGITQFHRKTFSPC 208          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A7S9SVJ7_9VIRU (Ribonuclease HII n=1 Tax=Virus NIOZ-UU159 TaxID=2763270 RepID=A0A7S9SVJ7_9VIRU)

HSP 1 Score: 177 bits (448), Expect = 1.020e-52
Identity = 96/198 (48.48%), Postives = 126/198 (63.64%), Query Frame = 0
Query:    3 IVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKY-------KHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPCCDY 193
            + GVDEV RG   G V +A ++LP  FPDE YK IKDSKKLS KKR  +  YIKE+ I Y +G AS  EID +NI NAT  AMHRA++   ++T    +++DG  F  Y          E+EC+  GD+ Y SI+AASILAK Y    ++  V  + +L +Y++ KNKGYGTK H +AI  HG+TE HRK+F  C +Y
Sbjct:   15 VAGVDEVARGTFIGPVISACVLLPVEFPDENYKQIKDSKKLSEKKREFLANYIKENCITYGIGEASCKEIDDINILNATMKAMHRAIDIAYKKTKFEYLVIDGPNFKPYIPPGYDNDIIEYECVPKGDSKYLSIAAASILAKDYHTKYIKNLVANNDKLLLYDIQKNKGYGTKKHHEAIKAHGLTEFHRKTFGICRNY 212          
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Match: A0A8J7KHP7_9FLAO (Ribonuclease HII n=1 Tax=Faecalibacter rhinopitheci TaxID=2779678 RepID=A0A8J7KHP7_9FLAO)

HSP 1 Score: 174 bits (441), Expect = 6.520e-52
Identity = 100/185 (54.05%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFK 188
            VG DE GRGCL G V AAA++L E F +E    I DSKKL+ K R  + L+I+E+A+A+AVG  +  EID +NI NA+FLAMHRAL+Q+   T I  I+VDGNRF KYK   HECI+ GD  Y +I+AASILAK YRD +M+   K D +   Y   +NK Y TK H +AIA+ G T  HR SFK
Sbjct:   12 VGCDEAGRGCLAGPVVAAAVILSEEFNNE---IINDSKKLNEKTRNSLRLFIEENALAWAVGIVTPQEIDQINILNASFLAMHRALDQLN--TPIDIIVVDGNRFNKYKDIPHECIIKGDGKYMNIAAASILAKTYRDEIMD---KLDLKYPAYNWKQNKAYPTKAHREAIAKFGTTPHHRLSFK 188          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156973 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCH7_9STRA4.650e-135100.00Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A835Z5Q4_9STRA2.920e-6457.07Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CBR9_9STRA1.240e-6257.30Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A6C0I969_9ZZZZ6.650e-5550.26Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
A0A6C0KWF9_9ZZZZ1.110e-5452.33Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
A0A6C0CF59_9ZZZZ1.240e-5349.48Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
UPI001C73E8148.060e-5353.26Ribonuclease HII n=1 Tax=Cryomorphaceae bacterium ... [more]
A0A6C0J237_9ZZZZ8.740e-5350.26Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
A0A7S9SVJ7_9VIRU1.020e-5248.48Ribonuclease HII n=1 Tax=Virus NIOZ-UU159 TaxID=27... [more]
A0A8J7KHP7_9FLAO6.520e-5254.05Ribonuclease HII n=1 Tax=Faecalibacter rhinopithec... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..193
e-value: 1.1E-62
score: 213.5
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 4..190
e-value: 6.5E-35
score: 120.8
IPR022898Ribonuclease HIIPANTHERPTHR10954:SF18RIBONUCLEASE HIIcoord: 3..190
IPR022898Ribonuclease HIICDDcd07182RNase_HII_bacteria_HII_likecoord: 4..189
e-value: 3.08149E-85
score: 247.284
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 3..190
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1484076..1484657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156973mRNA_801Tribonema minus UTEX_B_3156 mRNAContig_2 1484076..1484657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156973|e_gw1.2.138.1 ID=Trimin1|156973|e_gw1.2.138.1|Name=jgi.p|Trimin1|156973|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=194bp
MSIVGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAK
MDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAK
IMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKA
DPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSFKPCCDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR024567RNase_HII/HIII_dom
IPR022898RNase_HII
IPR001352RNase_HII/HIII
IPR012337RNaseH-like_sf