Trimin1|156960|e_gw1.2.283.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|156960
Unique Name	Trimin1\|156960\|e_gw1.2.283.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	158

Homology

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A836CI54_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI54_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.340e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0

Query:    1 MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDEDTTLEIV 157
            MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDEDTTLEIV
Sbjct:    1 MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDEDTTLEIV 157

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A835Z4I2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I2_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.510e-50
Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 0

Query:    1 MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDEDTTLEIV 157
            M  ++VLIVDDV  FRKLL+KQLERRG+ +IDEA DG+ AL++M+   Y  V+MDVMMPRMNGDVC R +REWE  +     P++LMSADVLS DNDV+ SG  Q FFTKP++IVRLGN+LRD+A  SS  G W +  +  +      D +  +++V
Sbjct:  424 MRRLKVLIVDDVPTFRKLLKKQLERRGIVRIDEAGDGVDALEMMQHTQYSAVLMDVMMPRMNGDVCARKMREWEATHGGSSVPILLMSADVLSEDNDVVESGTVQYFFTKPIDIVRLGNSLRDIAAASSKLGSWTQTASNSTGVHTPVDMEEVIDVV 580

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A835ZBI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI1_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.590e-48
Identity = 83/129 (64.34%), Postives = 105/129 (81.40%), Query Frame = 0

Query:    1 MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSS 129
            M+++ VLIVDDV  FRKLL+KQLERRGV +IDEA+DG+ AL++MK   Y VV+MDVMMPRMNGDVC R +REWE+    P  P++LMSADVLS +NDV++SG  Q FFTKP++IVRLGN LR++A+  S
Sbjct:  529 MANLSVLIVDDVSTFRKLLKKQLERRGVTRIDEAEDGVNALEMMKHTQYSVVLMDVMMPRMNGDVCARELREWEVRRGTPNVPILLMSADVLSDENDVVTSGIVQHFFTKPIDIVRLGNTLRNIAVTES 657

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A1E8CGR6_9GAMM (Histidine kinase n=1 Tax=Pseudohongiella acticola TaxID=1524254 RepID=A0A1E8CGR6_9GAMM)

HSP 1 Score: 87.0 bits (214), Expect = 6.160e-17
Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 0

Query:    2 SHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDED 151
              +RVL VDDV    +LL+  L + G  Q+D A++G QA+ + K  TYDV++MDV MP M+G    RAIR++E  + RP TPVI ++A V+  D           F TKPL    L   +  +   S   G  +++ A   P  + T+ +
Sbjct:  642 GRLRVLAVDDVPENLELLQLTLRKNG-HQVDTAENGEQAVALFKQATYDVILMDVQMPVMDGLQATRAIRQYEQQHQRPATPVIALTASVMDRDRQSARDAGMNGFATKPLEWQALNREINHLVTES---GINVELGATPVPEPENTERN 787

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A6C2UB29_9BACT (Sensory/regulatory protein RpfC n=1 Tax=Pontiella desulfatans TaxID=2750659 RepID=A0A6C2UB29_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 3.480e-16
Identity = 44/119 (36.97%), Postives = 74/119 (62.18%), Query Frame = 0

Query:    4 IRVLIVDDVMIFRKLLRKQLERRGVEQIDEA-QDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNAL 121
            +RVL+V+D ++ + +  + L + G   I EA +DG  A++++  + +D+V+MDV MP+M+G    +AIRE E+A   P+ P+I M+A  LS D +    G    + TKP+N+  L NA+
Sbjct:  399 VRVLVVEDNLVNQTVAVRTLHKMGC--IAEASKDGADAIELLANRHFDLVLMDVQMPKMDGLETTKAIREKEVAEALPRLPIIAMTAHALSGDRERCLEGGMDGYITKPINVAELSNAV 515

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: H0J113_9GAMM (Histidine kinase n=1 Tax=Halomonas sp. GFAJ-1 TaxID=1118153 RepID=H0J113_9GAMM)

HSP 1 Score: 84.7 bits (208), Expect = 3.980e-16
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0

Query:    4 IRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLN 113
            + +L+ DDV    +LL+  L+RRG  Q+D A DG QAL+    + YD+V+MDV MP M+G    +AIR WE     P+ PVI ++A ++  D +   +     F TKP++
Sbjct:  778 LHILVADDVPQNVQLLQGMLQRRG-HQVDTATDGKQALERSTAERYDIVLMDVHMPNMDGHTATKAIRSWEQEQGHPRLPVIALTASIMEQDREQAHAAGMDGFATKPID 886

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A354V931_9PROT (Histidine kinase n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=A0A354V931_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 7.210e-16
Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 0

Query:    4 IRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRL 117
            + VL+VDDV + R+L    LE+ G   +D A DG+QAL+++K   YD+V+MDV MPRMNG     AIR   +   +   P++ M+A+ +  D + L +     +  KP  +V+L
Sbjct:  754 LHVLVVDDVAVNRQLAAAILEKAG-HTVDGAADGLQALEMVKTADYDLVLMDVQMPRMNGIAATAAIRA--LTGTKANVPIVAMTANAMDGDRETLLAAGMNDYIAKPFTLVQL 864

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A7W4W4A7_9GAMM (CheY-like chemotaxis protein n=2 Tax=Litorivivens lipolytica TaxID=1524264 RepID=A0A7W4W4A7_9GAMM)

HSP 1 Score: 78.6 bits (192), Expect = 7.790e-16
Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 0

Query:    5 RVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNG-DVCVRAIREWEIANLRPKTPVILMSADVLSP-DNDVLSSGAAQQFFTKPLNIVRLGNAL 121
            R+LI +D  + + +L +QL+R G    D A+DG +AL + K + YD+VI D+ MP M+G D+C +AIRE E  + RP+T V++++A+      ND+ +SG    F TKPL +  +  AL
Sbjct:    4 RILIAEDDEVNQNILMRQLKRFGYS-ADLAEDGSKALALWKEQAYDLVITDLHMPNMDGYDLC-KAIRELEKTDNRPRTAVVMLTANAFGEAQNDIQASGI-DDFLTKPLRLPEIKQAL 119

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A3M2ISZ7_9BACT (Response regulator (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M2ISZ7_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 1.040e-15
Identity = 42/123 (34.15%), Postives = 72/123 (58.54%), Query Frame = 0

Query:    2 SHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNALRDV 124
               RVL+ +D  + +KL+++ LE+RG+ Q+D    G++A++ MK K YD+V+MDV MP M+G    R IRE E    +  TP+I ++A  +  D +   +     + +KP+   +L N L ++
Sbjct:   85 GEFRVLVAEDNSVNQKLMQRLLEKRGL-QVDMVATGVEAVEAMKQKEYDLVLMDVQMPEMDGLEATRRIREMEAVTGK-HTPIIALTAYAMKGDREKCLAAGMDGYLSKPIKPAQLENVLENL 205

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BLAST of jgi.p|Trimin1|156960 vs. uniprot
Match: A0A2E5X139_9PROT (Histidine kinase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E5X139_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 1.290e-15
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0

Query:    2 SHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYDVVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLSSGAAQQFFTKPLNIVRLGNAL 121
            S ++VLIVDD +  R L++  L++   E I EA DG++ALD MK K +DVV MD+ MPRM+G       R+WE  N    T +I ++A  L  + D         + TKPL    L N+L
Sbjct:  548 SELKVLIVDDAINNRSLVKAYLKKFPFE-ITEAVDGVEALDKMKEKAFDVVFMDMQMPRMDGYTATEEFRKWESQNRDSCTNIIALTACALKEEKDKSLVSGCDDYLTKPLKKETLINSL 666

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|156960 vs. uniprot

BLAST of jgi.p|Trimin1|156960 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CI54_9STRA	2.340e-106	100.00	CheY-like superfamily protein n=1 Tax=Tribonema mi...	[more]
A0A835Z4I2_9STRA	1.510e-50	54.78	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZBI1_9STRA	1.590e-48	64.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A1E8CGR6_9GAMM	6.160e-17	36.00	Histidine kinase n=1 Tax=Pseudohongiella acticola ...	[more]
A0A6C2UB29_9BACT	3.480e-16	36.97	Sensory/regulatory protein RpfC n=1 Tax=Pontiella ...	[more]
H0J113_9GAMM	3.980e-16	39.09	Histidine kinase n=1 Tax=Halomonas sp. GFAJ-1 TaxI...	[more]
A0A354V931_9PROT	7.210e-16	37.72	Histidine kinase n=1 Tax=Acetobacteraceae bacteriu...	[more]
A0A7W4W4A7_9GAMM	7.790e-16	40.34	CheY-like chemotaxis protein n=2 Tax=Litorivivens ...	[more]
A0A3M2ISZ7_9BACT	1.040e-15	34.15	Response regulator (Fragment) n=1 Tax=Calditrichae...	[more]
A0A2E5X139_9PROT	1.290e-15	40.00	Histidine kinase n=1 Tax=Halobacteriovoraceae bact...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 4..121 e-value: 3.1E-23 score: 93.2
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 6..121 e-value: 1.3E-22 score: 80.1
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 5..125 score: 35.378883
None	No IPR available	GENE3D	3.40.50.2300		coord: 4..153 e-value: 7.4E-30 score: 106.7
None	No IPR available	PIRSR	PIRSR026389-4	PIRSR026389-4	coord: 4..124 e-value: 6.0E-6 score: 22.5
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 2..150 e-value: 4.9E-15 score: 53.1
None	No IPR available	PANTHER	PTHR43047	TWO-COMPONENT HISTIDINE PROTEIN KINASE	coord: 3..113
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 6..121 e-value: 6.87298E-28 score: 97.9252
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 1..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:1362999..1363472 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|156960	mRNA_761	Tribonema minus UTEX_B_3156	mRNA	Contig_2 1362999..1363472 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|156960|e_gw1.2.283.1 ID=Trimin1|156960|e_gw1.2.283.1|Name=jgi.p|Trimin1|156960|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=158bp
MSHIRVLIVDDVMIFRKLLRKQLERRGVEQIDEAQDGIQALDIMKLKTYD
VVIMDVMMPRMNGDVCVRAIREWEIANLRPKTPVILMSADVLSPDNDVLS
SGAAQQFFTKPLNIVRLGNALRDVAMGSSHKGDWIKMIAKKSPTAKKTDE
DTTLEIV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily