Trimin1|156948|e_gw1.2.8.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|156948
Unique Name	Trimin1\|156948\|e_gw1.2.8.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	177

Homology

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A835Z4K3_9STRA (CheY-like superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K3_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.860e-119
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0

Query:    1 MYGGSVYVEDVEQGLLSVVVAFQLVKHTSKFVAQHARVESVRNLTLAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKIDSTVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQASKVKRR 176
            MYGGSVYVEDVEQGLLSVVVAFQLVKHTSKFVAQHARVESVRNLTLAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKIDSTVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQASKVKRR
Sbjct:    1 MYGGSVYVEDVEQGLLSVVVAFQLVKHTSKFVAQHARVESVRNLTLAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKIDSTVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQASKVKRR 176

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A417U6G3_9FIRM (Stage 0 sporulation protein A homolog n=1 Tax=Lachnospiraceae bacterium OM04-12BH TaxID=2292272 RepID=A0A417U6G3_9FIRM)

HSP 1 Score: 95.5 bits (236), Expect = 2.510e-21
Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 0

Query:   54 RALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKID----STVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQ 169
            R L+V+DN+L +++   + T+ G  VE A DG +A+EM      G+Y+++  DI+MP+M+G+EAT R+R++D     TVPI+A+SAN FD D      AG     SKP+  +   +V+ Q
Sbjct:   74 RILVVEDNELNMEIAEYMFTERGAVVEKAADGKKALEMFAASEEGYYDVIMMDIMMPEMDGLEATRRIRRMDRKDAETVPIFAMSANAFDDDVARSRAAGMNEHLSKPLSFEKAAAVIAQ 193

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A3E2WBU8_9FIRM (Stage 0 sporulation protein A homolog n=9 Tax=Eubacteriales TaxID=186802 RepID=A0A3E2WBU8_9FIRM)

HSP 1 Score: 97.1 bits (240), Expect = 3.780e-20
Identity = 48/125 (38.40%), Postives = 78/125 (62.40%), Query Frame = 0

Query:   49 DSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKIDST----VPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQ 169
            D    R L+ +DN++  ++ G +  + G  VE A DGSEAVEM+R+   G+Y+++F DI MP M+G +A   +R ++      +PI A++AN F+ D  E +RAG  A FSKP+  D + ++L++
Sbjct:  976 DYKGKRILLAEDNEINREIAGTLIREMGIMVEEAMDGSEAVEMVRQSEEGYYDLIFMDIQMPVMDGYQAAKVIRGLERGDACHMPIIAMTANAFEEDVREAMRAGMNAHFSKPIDLDALEALLSK 1100

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: UPI0013E03D3E (PTS transporter subunit EIIC n=1 Tax=Luxibacter massiliensis TaxID=2219695 RepID=UPI0013E03D3E)

HSP 1 Score: 95.9 bits (237), Expect = 9.410e-20
Identity = 60/171 (35.09%), Postives = 85/171 (49.71%), Query Frame = 0

Query:    1 MYGGSVYVE-DVEQGLLSVVVAFQLVKHTSKFVAQHARVESVRNLTLAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKIDS---TVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVL 167
            M  G +YVE +  QG       F ++ H  +   Q    E V +     D    R L+V+DN L  ++  +        +E+A +G EAVE+M     G+YN++F DI MPKMNG EA   +RK+D     +PI A++AN F  D    + AG     SKPV  D +  VL
Sbjct:  823 MMNGEIYVESEKNQGS-----KFTVILHLKEAARQAVPKEPVLSPASGGDLEGRRVLLVEDNDLNREIACEFLKPCKVEIETAVNGREAVELMSSSHPGYYNLIFMDIQMPKMNGYEAAAAIRKMDRPDCNIPIVAMTANAFSDDIRNAMEAGMNEHVSKPVSADRLTEVL 988

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: UPI001FD149F8 (response regulator n=1 Tax=Cuneatibacter sp. NSJ-177 TaxID=2931401 RepID=UPI001FD149F8)

HSP 1 Score: 95.9 bits (237), Expect = 9.510e-20
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 0

Query:   39 ESVRNLTLAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKID----STVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQASK 172
            E + +L  A D    R L+V+DN++  ++   +  + G  VE A DG EAV  +     G+Y+I+  DI MPK+NG EAT ++R++      TVPI A++A+ F+ D    + AG TA F+KP+  D +  +L +  K
Sbjct:  948 EELPSLDPAPDYAGRRVLLVEDNEMNREIARTLIEEMGIQVEEACDGEEAVRRVDRSAEGYYDIILMDIQMPKLNGYEATKKIRRLKRRDAETVPIIAMTADAFEEDVQNAIHAGMTAHFAKPIEVDLLEQILRKYMK 1085

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A254S6P1_9BACT (Hybrid sensor histidine kinase/response regulator n=1 Tax=Fibrobacter sp. UWB4 TaxID=1964356 RepID=A0A254S6P1_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-19
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 0

Query:   39 ESVRNLTLAHDSNVS------RALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKI--DSTVPIYAISANGFDSDFDEIVRAGATAGFSKPV 158
            E+V  +  AH    S      R L+V+DN+L +++   +   +G  VESA DGS AVE +RE+G  +Y+ +  DI MP M+G EAT  +RK+  D  VPI A+SAN FD D  + + AG     +KPV
Sbjct:  652 EAVEQMRFAHSEQESVSFEGFRVLVVEDNELNLEISKDILESAGVIVESASDGSVAVECLREKGPDYYDCILMDIQMPVMDGFEATRAIRKMFPDKRVPIIALSANAFDEDRRKSLEAGMDGHLAKPV 779

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A7X3MK08_9FIRM (Stage 0 sporulation protein A homolog n=1 Tax=Sporofaciens musculi TaxID=2681861 RepID=A0A7X3MK08_9FIRM)

HSP 1 Score: 95.5 bits (236), Expect = 1.290e-19
Identity = 44/121 (36.36%), Postives = 74/121 (61.16%), Query Frame = 0

Query:   51 NVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKID----STVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVL 167
            +  R L+ +DN+L  ++   +  ++GFTVE A DG +AV+M+R  G G+Y ++  DI MP MNG EA   +RK++    + +PI A++AN F+ D  E +++G     +KP+    ++ VL
Sbjct:  922 HTGRILLAEDNELNQEIAEVILEEAGFTVEVAEDGQKAVDMLRNAGVGYYQLILMDIQMPNMNGYEAARTIRKLNECELANIPIIAMTANAFEEDKQEALKSGMNGHIAKPIDVGLLFGVL 1042

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: UPI00068A54D5 (PAS domain-containing protein n=1 Tax=Selenomonas sp. ND2010 TaxID=1410618 RepID=UPI00068A54D5)

HSP 1 Score: 94.7 bits (234), Expect = 2.320e-19
Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 0

Query:   54 RALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKI----DSTVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVLTQASKVKRR 176
            R L+ +DN+L  ++   + +D GF VE A DG  AV MM     G Y++V  DI MPK+NG EAT R+RK+     + +PI A++AN FD D    V AG  A   KP   D +Y  + +    K R
Sbjct:  588 RILLAEDNELNAEIAMAILSDKGFEVEHAADGEAAVAMMTAAAEGQYDLVLMDIQMPKLNGYEATRRIRKLANPYQAEIPIIAMTANAFDEDKHRTVLAGMNAHVPKPFDVDKLYDTIEEVLLEKDR 714

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: A0A413HGL2_9FIRM (Stage 0 sporulation protein A homolog n=3 Tax=unclassified Roseburia TaxID=2637578 RepID=A0A413HGL2_9FIRM)

HSP 1 Score: 94.7 bits (234), Expect = 2.440e-19
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0

Query:   46 LAHDSNVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKID----STVPIYAISANGFDSDFDEIVRAGATAGFSKPVP----RDTIYSVL 167
            L+ D    R L+V+DN L +++   +    G  VE A++G EAVE +R    G+Y+++  DI+MP+M+G+EAT  +R+ID     T+PI A+SAN FD D    + +G     SKPV     ++T+ SVL
Sbjct: 1167 LSRDFTGKRVLVVEDNALNMEIARTLLETFGIEVEEAYNGKEAVEGVRTTPPGYYDLILMDIMMPEMDGLEATRTIRQIDREDLKTLPIIAMSANAFDEDVKRSIASGMNGHLSKPVNVSLLKETLASVL 1296

[Close]

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Match: R6M6Z5_9CLOT (Stage 0 sporulation protein A homolog n=1 Tax=Clostridium sp. CAG:253 TaxID=1262785 RepID=R6M6Z5_9CLOT)

HSP 1 Score: 94.7 bits (234), Expect = 2.450e-19
Identity = 47/116 (40.52%), Postives = 75/116 (64.66%), Query Frame = 0

Query:   56 LIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFYNIVFCDIVMPKMNGVEATLRMRKID----STVPIYAISANGFDSDFDEIVRAGATAGFSKPVPRDTIYSVL 167
            L+V+DN+L  ++L  +  D G  V++AFDG +AV+++RE     Y+++F DI+MPKM+G+EAT  +R I     +TVPI A+SAN F+ D  + + +G  A  SKP+    +  V+
Sbjct: 1188 LVVEDNELNSEILCTILKDEGMIVDTAFDGQQAVDIIRESAEYEYDLIFMDIMMPKMDGLEATREIRNIGRADCNTVPIIAMSANAFEEDVKKSIASGMNAHLSKPLDIVNMMDVM 1303

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|156948 vs. uniprot

BLAST of jgi.p|Trimin1|156948 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z4K3_9STRA	1.860e-119	100.00	CheY-like superfamily protein n=1 Tax=Tribonema mi...	[more]
A0A417U6G3_9FIRM	2.510e-21	40.00	Stage 0 sporulation protein A homolog n=1 Tax=Lach...	[more]
A0A3E2WBU8_9FIRM	3.780e-20	38.40	Stage 0 sporulation protein A homolog n=9 Tax=Euba...	[more]
UPI0013E03D3E	9.410e-20	35.09	PTS transporter subunit EIIC n=1 Tax=Luxibacter ma...	[more]
UPI001FD149F8	9.510e-20	36.23	response regulator n=1 Tax=Cuneatibacter sp. NSJ-1...	[more]
A0A254S6P1_9BACT	1.240e-19	41.41	Hybrid sensor histidine kinase/response regulator ...	[more]
A0A7X3MK08_9FIRM	1.290e-19	36.36	Stage 0 sporulation protein A homolog n=1 Tax=Spor...	[more]
UPI00068A54D5	2.320e-19	40.16	PAS domain-containing protein n=1 Tax=Selenomonas ...	[more]
A0A413HGL2_9FIRM	2.440e-19	39.23	Stage 0 sporulation protein A homolog n=3 Tax=uncl...	[more]
R6M6Z5_9CLOT	2.450e-19	40.52	Stage 0 sporulation protein A homolog n=1 Tax=Clos...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 53..167 e-value: 1.0E-19 score: 81.5
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 56..165 e-value: 4.9E-22 score: 78.2
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 54..171 score: 31.7183
None	No IPR available	GENE3D	3.40.50.2300		coord: 40..175 e-value: 1.4E-28 score: 101.3
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 55..169 e-value: 3.9E-8 score: 30.5
None	No IPR available	PIRSR	PIRSR026389-4	PIRSR026389-4	coord: 33..170 e-value: 3.0E-6 score: 23.5
None	No IPR available	PANTHER	PTHR44591	STRESS RESPONSE REGULATOR PROTEIN 1	coord: 53..170
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 56..167 e-value: 3.61326E-30 score: 104.474
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 54..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:1086426..1086956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|156948	mRNA_665	Tribonema minus UTEX_B_3156	mRNA	Contig_2 1086426..1086956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|156948|e_gw1.2.8.1 ID=Trimin1|156948|e_gw1.2.8.1|Name=jgi.p|Trimin1|156948|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=177bp
MYGGSVYVEDVEQGLLSVVVAFQLVKHTSKFVAQHARVESVRNLTLAHDS
NVSRALIVDDNKLQVKLLGKVCTDSGFTVESAFDGSEAVEMMRERGAGFY
NIVFCDIVMPKMNGVEATLRMRKIDSTVPIYAISANGFDSDFDEIVRAGA
TAGFSKPVPRDTIYSVLTQASKVKRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily