Trimin1|155793|gw1.8.330.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|155793
Unique NameTrimin1|155793|gw1.8.330.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length242
Homology
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BLAST of jgi.p|Trimin1|155793 vs. uniprot
Match: A0A835YJP2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJP2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.220e-10
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:    1 ESKALKHFPECYGIITSATSLRFFDCTALVSV 32
            ESKALKHFPECYGIITSATSLRFFDCTALVSV
Sbjct:    1 ESKALKHFPECYGIITSATSLRFFDCTALVSV 32
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155793 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YJP2_9STRA3.220e-10100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..242
e-value: 3.4E-54
score: 185.5
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 78..173
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 2..102
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 101..242
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 2..102
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 101..242
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 78..173
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 16..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:1874924..1875649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155793mRNA_2909Tribonema minus UTEX_B_3156 mRNAContig_8 1874924..1875649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|155793|gw1.8.330.1 ID=Trimin1|155793|gw1.8.330.1|Name=jgi.p|Trimin1|155793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=242bp
ESKALKHFPECYGIITSATSLRFFDCTALVSVPESIGHLTGLTRLDFTGC
WALNRVPESIGQLTGLESLDFTGCWALNRVPESIGQLTGLRSLDFSWCKA
LESVPESIGHLTGLTSLSFDGCHALDSVPQSIGQLTGLTSLDFTRCYVLE
IVPESIGQLTGLTSLDFYECTALVSVPESIGHLTGLTSLSFDGCHALDSV
PQSIGQLTGLTSLDFTRCYVLEIVPESIGQLTGLTSLLVVNC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf