Trimin1|155544|gw1.21.180.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|155544
Unique NameTrimin1|155544|gw1.21.180.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length144
Homology
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A835Z2I1_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I1_9STRA)

HSP 1 Score: 307 bits (786), Expect = 4.860e-106
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF
Sbjct:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A835Z3R6_9STRA (Homeodomain-like protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3R6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.020e-50
Identity = 81/145 (55.86%), Postives = 99/145 (68.28%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALS-VPGRTENSIKARF 144
            +W  +EDERL  AVQ HG   WK IAA VG+R+HVQCLQRWKKVLRP L+KG+WT  EDA L  TV + T  NW  V   L  RT RQC+ RW+HHLDPD+KR  +T  EDA IL    + GNRW+ IA   +PGR + +I+ R+
Sbjct:   11 KWAPDEDERLNAAVQAHGATKWKRIAAQVGTRNHVQCLQRWKKVLRPDLKKGDWTPEEDALLTDTVQSGTCKNWGKVALHLPNRTYRQCQLRWQHHLDPDIKRGSFTAAEDALILEGFKRFGNRWKHIARKHLPGRIDYTIRGRY 155          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.530e-50
Identity = 80/144 (55.56%), Postives = 105/144 (72.92%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            +WT  EDE LR AV+++GE +WK IA +VG+R+HVQCLQRWKKVL+PGL KG+W+A EDA+L   V      NW  +   + GRTS+QCRERW HHLDP +K+ EYT +ED  IL    + GN+W +IA  +PGRTEN++K R+
Sbjct:   29 KWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFK-NWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRW 171          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 3.810e-49
Identity = 83/144 (57.64%), Postives = 101/144 (70.14%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPL-NWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKAR 143
            RW   ED++L  AV+  GE  WK IA  VGSR+HVQCLQRWKKVLRPGL KG+W A EDA L +   A  P  NW  + +S++GRTS+QCRERW HHLDP + +  YT +ED  I+ +  + GNRW QIA  +PGRTENSIK R
Sbjct:  108 RWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATA--PFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIR 249          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 160 bits (406), Expect = 8.180e-48
Identity = 79/144 (54.86%), Postives = 97/144 (67.36%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWT EEDE+LR+AV RHGE +WK IA +V  R+H QCLQRW KVL PGL KG W   ED  L   VA     NW  V   + GRTS+QCRERW +HLDP + R EY+ +ED  IL +  + GNRW  IA  +PGRTE+++K R+
Sbjct:   11 RWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRK-NWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRW 153          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 8.640e-48
Identity = 80/144 (55.56%), Postives = 97/144 (67.36%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWTA EDE LR AV+ H E +WK IAA V  R+H QCLQRW KVL PGL KG W+  ED  L R VAA    NW  V   + GRTS+QCRERW +HLDP + R  Y+P+ED  IL +  + GNRW  IA  +PGRTE+++K R+
Sbjct:    7 RWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAA-DQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRW 149          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A024UVV8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVV8_9STRA)

HSP 1 Score: 169 bits (428), Expect = 9.090e-48
Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWT E+DE LR A++  G  +WK IA  V  R+H QCLQRW KVL+PGL KG W A ED  L R V   T +NW  + KS+ GRT++QCRERWK+HLDP + +  Y+ DED  + A++ + GNRW QIA  +PGRTE+S+K R+
Sbjct:   42 RWTPEQDELLRLAIEEFGSKNWKAIAERVPGRNHAQCLQRWNKVLKPGLVKGHWAADEDENLVRLVQNSTTVNWGEISKSIEGRTAKQCRERWKNHLDPSINKGPYSSDEDMLLAAAYAELGNRWTQIANRLPGRTEDSVKMRW 185          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 162 bits (409), Expect = 2.600e-47
Identity = 79/144 (54.86%), Postives = 98/144 (68.06%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWT EED++LR+AV RHGE +WK IA +V  R+H QCLQRW KVL PGL KG W   ED  L   VA     NW  V   + GRTS+QCRERW +HLDP + R EY+P+ED  IL +  + GNRW  IA  +PGRTE+++K R+
Sbjct:   84 RWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRK-NWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRW 226          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 3.310e-47
Identity = 84/144 (58.33%), Postives = 102/144 (70.83%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPL-NWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKAR 143
            RW  EED++L  AV+  GE  WK IA  VGSR+HVQCLQRWKKVLRPGL KG+W A EDA L +   A  P  NW  + +S++GRTS+QCRERW HHLDP + +  YT +ED  I+ +  + GNRW QIA  +PGRTENSIK R
Sbjct:  115 RWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATA--PFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIR 256          
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Match: A0A1V9ZSD4_9STRA (Myb-like DNA-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSD4_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.190e-46
Identity = 71/144 (49.31%), Postives = 102/144 (70.83%), Query Frame = 0
Query:    1 RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPDLKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF 144
            RWT E+DE+L+  ++++G  +WK IA+ V  R+H QCLQRW KVL+PGL KG W+  ED  L + V   T +NW+ + K + GRT++QCRERWK+HLDP + +  Y  DED  ++ ++ + GNRW QIA  +PGRTE+S+K R+
Sbjct:   41 RWTREQDEQLKSGIEKYGTKNWKAIASMVPGRNHAQCLQRWNKVLKPGLVKGHWSFDEDDALIKLVRNATTINWADISKQVPGRTAKQCRERWKNHLDPTINKGPYKSDEDLVLMNAYQELGNRWTQIAELLPGRTEDSVKMRW 184          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155544 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2I1_9STRA4.860e-106100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835Z3R6_9STRA2.020e-5055.86Homeodomain-like protein (Fragment) n=2 Tax=Tribon... [more]
A0A7S2UU49_9STRA4.530e-5055.56Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D8LM16_ECTSI3.810e-4957.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3G911_PHYRM8.180e-4854.86Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662WMC1_9STRA8.640e-4855.56Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A024UVV8_9STRA9.090e-4853.47Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D0NJN5_PHYIT2.600e-4754.86Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A6H5KJU6_9PHAE3.310e-4758.33MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A1V9ZSD4_9STRA5.190e-4649.31Myb-like DNA-binding protein n=1 Tax=Achlya hypogy... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 50..99
e-value: 6.2E-10
score: 49.0
coord: 1..47
e-value: 1.2E-8
score: 44.8
coord: 102..144
e-value: 3.0E-5
score: 33.4
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 98..144
score: 8.47846
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 46..97
score: 10.429343
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..45
score: 10.41773
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 105..144
e-value: 2.16022E-7
score: 42.9478
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 1..45
e-value: 2.67916E-10
score: 50.6518
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 53..97
e-value: 1.13403E-7
score: 43.7182
NoneNo IPR availableGENE3D1.10.10.60coord: 1..48
e-value: 1.1E-16
score: 62.5
NoneNo IPR availableGENE3D1.10.10.60coord: 105..144
e-value: 5.2E-12
score: 47.5
NoneNo IPR availableGENE3D1.10.10.60coord: 49..103
e-value: 4.0E-18
score: 67.0
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 2..62
e-value: 4.3E-16
score: 58.9
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 1..60
coord: 53..144
NoneNo IPR availablePANTHERPTHR45614:SF152SUBFAMILY NOT NAMEDcoord: 1..60
coord: 53..144
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 104..144
e-value: 8.6E-11
score: 41.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..49
score: 23.721254
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 50..97
score: 12.885577
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 98..144
score: 18.372841
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 48..144
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:695990..698648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155544mRNA_7181Tribonema minus UTEX_B_3156 mRNAContig_21 695990..698648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|155544|gw1.21.180.1 ID=Trimin1|155544|gw1.21.180.1|Name=jgi.p|Trimin1|155544|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=144bp
RWTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLR
KGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDPD
LKRTEYTPDEDAAILASHHQHGNRWRQIALSVPGRTENSIKARF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf