Trimin1|154711|gw1.3.519.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|154711
Unique Name	Trimin1\|154711\|gw1.3.519.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	102

Homology

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BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A836CMT6_9STRA (Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 4.350e-62
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG
Sbjct:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102

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BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.760e-59
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

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BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: V9LJF7_CALMI (Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=V9LJF7_CALMI)

HSP 1 Score: 185 bits (469), Expect = 5.050e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A835ZF66_9STRA (Histone H4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF66_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.050e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVT+MDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 7.180e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 184 bits (467), Expect = 1.020e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.450e-58
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 124

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BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: H4_DROME (Histone H4 n=192 Tax=cellular organisms TaxID=131567 RepID=H4_DROME)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A1D1W2Z4_RAMVA (Histone H4 n=4 Tax=Panarthropoda TaxID=88770 RepID=A0A1D1W2Z4_RAMVA)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A182QIK7_9DIPT (Histone H4 n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QIK7_9DIPT)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0

Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|154711 vs. uniprot

BLAST of jgi.p|Trimin1|154711 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CMT6_9STRA	4.350e-62	100.00	Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxI...	[more]
F0W2L9_9STRA	1.760e-59	96.08	Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID...	[more]
V9LJF7_CALMI	5.050e-59	95.10	Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=V9L...	[more]
A0A835ZF66_9STRA	5.050e-59	95.10	Histone H4 n=2 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A024G0M5_9STRA	7.180e-59	95.10	Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI...	[more]
H4_SOLLC	1.020e-58	94.12	Histone H4 n=13 Tax=cellular organisms TaxID=13156...	[more]
A0A3L6V663_9STRA	1.450e-58	95.10	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]
H4_DROME	1.450e-58	94.12	Histone H4 n=192 Tax=cellular organisms TaxID=1315...	[more]
A0A1D1W2Z4_RAMVA	1.450e-58	94.12	Histone H4 n=4 Tax=Panarthropoda TaxID=88770 RepID...	[more]
A0A182QIK7_9DIPT	1.450e-58	94.12	Histone H4 n=1 Tax=Anopheles farauti TaxID=69004 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 5..16 score: 87.25 coord: 20..39 score: 88.38 coord: 77..89 score: 82.58 coord: 89..100 score: 81.37 coord: 62..76 score: 91.96 coord: 40..60 score: 93.56
IPR001951	Histone H4	SMART	SM00417	h44	coord: 16..90 e-value: 3.3E-28 score: 109.7
IPR001951	Histone H4	CDD	cd00076	H4	coord: 19..101 e-value: 3.90604E-40 score: 126.076
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 31..97 e-value: 1.1E-8 score: 35.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..102 e-value: 8.8E-55 score: 185.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..101
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..102
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 1..102
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_3	contig	Contig_3:472417..472722 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|154711	mRNA_93	Tribonema minus UTEX_B_3156	mRNA	Contig_3 472417..472722 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|154711|gw1.3.519.1 ID=Trimin1|154711|gw1.3.519.1|Name=jgi.p|Trimin1|154711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=102bp
MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYG
FG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR035425	CENP-T/H4_C
IPR009072	Histone-fold
IPR019809	Histone_H4_CS