prot_S-firma_M_contig9842.20830.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9842.20830.1
Unique Nameprot_S-firma_M_contig9842.20830.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length98
Homology
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BLAST of mRNA_S-firma_M_contig9842.20830.1 vs. uniprot
Match: D8LHE3_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.450e-22
Identity = 54/92 (58.70%), Postives = 56/92 (60.87%), Query Frame = 0 
Query:    1 ALAKHLAPRPGNAPLRHRLKRFAKSWSDDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXLRLFLPRVPCAAKRPLYWELDGGEPLGAALKGKV 92
            A+AKHL PRPGNAPLRHRLK F K W + AAA                          LRLFL RVPCAAKRPLY ELDGGEPLG ALKGK 
Sbjct:  225 AVAKHLEPRPGNAPLRHRLKLFTKPWGE-AAAAATAATAKTSGVASKMVVTGRQQKQQLRLFLQRVPCAAKRPLYLELDGGEPLGTALKGKT 315
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BLAST of mRNA_S-firma_M_contig9842.20830.1 vs. uniprot
Match: A0A6H5KFC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC8_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.210e-10
Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:   59 LRLFLPRVPCAAKRPLYWELDGGEPLGAALKGKV 92
            LRLFL RVPC AKRPLYWELDGGE LG  LKGK 
Sbjct:   43 LRLFLQRVPCPAKRPLYWELDGGESLGVVLKGKT 76
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9842.20830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHE3_ECTSI5.450e-2258.70HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KFC8_9PHAE6.210e-1082.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9842contigS-firma_M_contig9842:2102..2871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9842.20830.1mRNA_S-firma_M_contig9842.20830.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9842 2102..2871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9842.20830.1 ID=prot_S-firma_M_contig9842.20830.1|Name=mRNA_S-firma_M_contig9842.20830.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=98bp
ALAKHLAPRPGNAPLRHRLKRFAKSWSDDAAAAAAAAAAAPGSTDTDLWA
PAPVPRRRLRLFLPRVPCAAKRPLYWELDGGEPLGAALKGKVRASGS*
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