prot_S-firma_M_contig9618.20616.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9618.20616.1
Unique Nameprot_S-firma_M_contig9618.20616.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length140
Homology
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BLAST of mRNA_S-firma_M_contig9618.20616.1 vs. uniprot
Match: D7FKK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.050e-19
Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 0 
Query:   64 IIDSMEGKKFGDLIDQAMKQLEMAGVTGSEQLMERLRGRAARDLGRLRAKAGMGSA-DLGDVDLAGCAVNAAPGAIEE 140
            +ID  +G  FG ++D+ + QLEMAGVTGSEQL++RLRGRAARD  RLRAKAG+ S  DL D D+   AV+AAPGAIEE
Sbjct:    1 MIDWTDGITFGGVMDRVLHQLEMAGVTGSEQLVKRLRGRAARDYSRLRAKAGIASTVDLTDEDIFSSAVDAAPGAIEE 78
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9618.20616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKK6_ECTSI1.050e-1964.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9618contigS-firma_M_contig9618:1052..3713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9618.20616.1mRNA_S-firma_M_contig9618.20616.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9618 1052..3713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9618.20616.1 ID=prot_S-firma_M_contig9618.20616.1|Name=mRNA_S-firma_M_contig9618.20616.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=140bp
GFRDVEGEAIAVAAKVSELVRKKDVLGALRVARLVQVAPLLEELTSYTAL
GPKLRRRKIDVDHIIDSMEGKKFGDLIDQAMKQLEMAGVTGSEQLMERLR
GRAARDLGRLRAKAGMGSADLGDVDLAGCAVNAAPGAIEE
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