prot_S-firma_M_contig9516.20506.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9516.20506.1
Unique Nameprot_S-firma_M_contig9516.20506.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length112
Homology
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Match: D7G669_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G669_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 5.470e-43
Identity = 84/111 (75.68%), Postives = 88/111 (79.28%), Query Frame = 0
Query:    1 ELERVVFLSRERILLLACPAGPTKPGLVKSNHHLTELQKMTFMRRDPTLVTLHYLAPERLVEAAXXXXXXXXXXXXXAAVAATKRNVYRFGLDDKEAFIRIIRGALQRFQA 111
            ELERVVFLSRERIL+LACP+GPT PGLVKSNHHLTELQKMTFMRRDP+LVTLHYLAP    E                +  ATKRNVYRFGLDDKEAFIRIIRGALQRFQA
Sbjct: 1344 ELERVVFLSRERILVLACPSGPTSPGLVKSNHHLTELQKMTFMRRDPSLVTLHYLAPGGPQE--------------DGSPGATKRNVYRFGLDDKEAFIRIIRGALQRFQA 1440          
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Match: A0A4D9DAX1_9STRA (Rhodanese domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.500e-9
Identity = 43/113 (38.05%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    1 ELERVVFLSRERILLL---ACPAGPTKPGLVKSNHHLTELQKMTFMRRDPTLVTLHYLAPERLVEAAXXXXXXXXXXXXXAAVAATKRNVYRFGLDDKEAFIRIIRGALQRFQ 110
            EL R + L+ ERI++L      A     G VKSNHHLTEL +MTFM+R+P +VTL++  PE                         K   YR G   KE FI  ++  LQRF+
Sbjct: 1538 ELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMKREPDIVTLYFRNPESQAGTEDTEAGPQKKENL-------KGRAYRIG--QKEDFIAALQLRLQRFK 1641          
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Match: W7U2B4_9STRA (Tbc1 domain family member 23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.410e-9
Identity = 44/113 (38.94%), Postives = 58/113 (51.33%), Query Frame = 0
Query:    1 ELERVVFLSRERILLL---ACPAGPTKPGLVKSNHHLTELQKMTFMRRDPTLVTLHYLAPERLVEAAXXXXXXXXXXXXXAAVAATKRNVYRFGLDDKEAFIRIIRGALQRFQ 110
            EL R + L+ ERI++L      A     G VKSNHHLTEL +MTFM+R+P +VTL++  PE   +A                    K   YR G   KE FI  ++  LQRF+
Sbjct: 1104 ELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMKREPDIVTLYFRNPE--CQAGTEDTEAGPQKKENL-----KGRAYRIG--QKEEFIAALQLRLQRFK 1207          
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Match: A0A7S2CM97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CM97_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-6
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 0
Query:    2 LERVVFLSRERILLLACPA---GPTKPGL-----VKSNHHLTELQKMTFMRRDPTLVTLHYLAPERLVEAAXXXXXXXXXXXXXAAVAATKRNVYRFGLDDKEAFIRIIRGALQRFQ 110
            L R++ ++++R+L+L   A   G   P L     VKSNHHL+EL +MT +++DP +VTLHY                        +    +R  YR  +D K+ FI  ++  LQRF+
Sbjct:  129 LPRIIIVTKDRLLVLQAIALDDGLPPPLLNSQATVKSNHHLSELSRMTLLKKDPDVVTLHY--------------------RDGPSEKDLRRRTYR--VDCKDDFITTLQQCLQRFR 223          
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Match: A0A7S2CN15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN15_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.460e-6
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 0
Query:    2 LERVVFLSRERILLLACPA---GPTKPGL-----VKSNHHLTELQKMTFMRRDPTLVTLHYLAPERLVEAAXXXXXXXXXXXXXAAVAATKRNVYRFGLDDKEAFIRIIRGALQRFQ 110
            L R++ ++++R+L+L   A   G   P L     VKSNHHL+EL +MT +++DP +VTLHY                        +    +R  YR  +D K+ FI  ++  LQRF+
Sbjct:  316 LPRIIIVTKDRLLVLQAIALDDGLPPPLLNSQATVKSNHHLSELSRMTLLKKDPDVVTLHY--------------------RDGPSEKDLRRRTYR--VDCKDDFITTLQQCLQRFR 410          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9516.20506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G669_ECTSI5.470e-4375.68Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9DAX1_9STRA5.500e-938.05Rhodanese domain-containing protein n=1 Tax=Nannoc... [more]
W7U2B4_9STRA7.410e-938.94Tbc1 domain family member 23 n=1 Tax=Nannochlorops... [more]
A0A7S2CM97_9STRA1.450e-632.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2CN15_9STRA2.460e-632.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9516contigS-firma_M_contig9516:2614..2949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9516.20506.1mRNA_S-firma_M_contig9516.20506.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9516 2614..2949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9516.20506.1 ID=prot_S-firma_M_contig9516.20506.1|Name=mRNA_S-firma_M_contig9516.20506.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=112bp
ELERVVFLSRERILLLACPAGPTKPGLVKSNHHLTELQKMTFMRRDPTLV
TLHYLAPERLVEAAAAAAAAAGGEGGDAAVAATKRNVYRFGLDDKEAFIR
IIRGALQRFQA*
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