prot_S-firma_M_contig9287.20237.1 (polypeptide) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9287.20237.1 vs. uniprot
Match: D7FQX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX1_ECTSI) HSP 1 Score: 387 bits (994), Expect = 1.070e-120 Identity = 364/651 (55.91%), Postives = 383/651 (58.83%), Query Frame = 0
Query: 1 LGSRRLVAIRGAGRRVRIFRLLGRSYLQRALGRNHLQALVHTRQAYPPKAMPCTLLLASDPLPSGGMKAILHPLERGGR---DSPTRADSTASTGGGRPASPAVRARGSAGVAXXXXXXXXXXXXXEEAGPLVGVSVVMDCRVACTVELLWDVDLTLLGREMGLHPKLHLLPASTGGDGSS-----RSNAINAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVANLSSLAGDLWSSVVSASGRLGRTAGSGGRWGRRVAAGAGAPNDSSA-----------------------------PSARVQQGQDLRGGDSGANESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPVGS--RSWAASLGLRKSSALNGAAGANGGADGADEAGV--TVGQILGLNGSXXXXXXXXXXXXXXXXXXXVPGARM-GLCGKRTVPRALSAGGNRVFETLPGESYFRGRPQSGAWAAGXXXXXXXXXXTXXXXXVFAGXXXXXXXXG--------------------------GRRRWPRVGDSVRAGRCSLAIVIRPAAGAENGDWSGWRHRPTHRVTRQVLLVQLTERSPAAGSGTASQQAPSARCLRHLVAISKGGGQGDAEAIYSFSEV 583
LGSRRLVAIRGAGRRVRIFRLLGR+YL ALVHTRQAYPPK MPC+LL+ASDP G+KAILHP + G D P A+ AR EAGPLVGVSVV+DCRVACTVELLWDVDLTLLGREMGLHPKLHLLPASTG GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V++LSSL G+ W+S VSAS RL R RWG RVA GAP DSS+ PS V + RG XXXXXXXXXXXXXXXXXXX +G G RSWAASLGLRKSS N GG DG+D AG TVGQ LG XXXXXXXXXXX PG M GLCGKRTVPRALSAGG RVF TLPGESYFRGR QSG W AG T GXXXXXX G G R WPRVGDSVRAGRCSLAIVIRPAAG E GDW+GWRHRPTHRVTRQVLLVQLTERS A G SQQAPSARCLRHLVA+SKGG GD E+IYSF+EV
Sbjct: 47 LGSRRLVAIRGAGRRVRIFRLLGRNYLXXXXXXXXXXALVHTRQAYPPKTMPCSLLVASDP---DGVKAILHPRDSGDDIQVDPPXXXXXXXXXXXXXXXXGALGARA-------------------EAGPLVGVSVVLDCRVACTVELLWDVDLTLLGREMGLHPKLHLLPASTGAGGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSLSSLPGNAWASAVSASRRLFRAGRE--RWGSRVA---GAPPDSSSRPLGSRGPGRXXXXXXXXXXXXXXXXSGYPSNDVDEEMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXDDNLGATAAEAVLASLDGQGARRAGTGNGGSGGAGRSWAASLGLRKSSVFNA-----GGGDGSDAAGAGGTVGQALGFX----------XXXXXXXXXXXXPGVGMIGLCGKRTVPRALSAGGGRVFTTLPGESYFRGRQQSGEWNAGATA-------TSAAGAAKTGXXXXXXVDGRATSAVSAFVXXXXXXXXXXERRPAAGGRDWPRVGDSVRAGRCSLAIVIRPAAGGETGDWAGWRHRPTHRVTRQVLLVQLTERS-AGADGAPSQQAPSARCLRHLVAMSKGG-DGDPESIYSFAEV 646
BLAST of mRNA_S-firma_M_contig9287.20237.1 vs. uniprot
Match: A0A6H5K7X0_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X0_9PHAE) HSP 1 Score: 371 bits (952), Expect = 4.760e-114 Identity = 332/637 (52.12%), Postives = 355/637 (55.73%), Query Frame = 0
Query: 1 LGSRRLVAIRGAGRRVRIFRLLGRSYLQRALGRNHLQALVHTRQAYPPKAMPCTLLLASDPLPSGGMKAILHPLERGGRDSPTRADSTASTGGGRPASPAVRARGSAGVAXXXXXXXXXXXXXE-EAGPLVGVSVVMDCRVACTVELLWDVDLTLLGREMGLHPKLHLLPASTGGDGSSRSNAINAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVANLSSLAGDLWSSVVSASGRLGRTAGSGGRWGRRVAAGAGAPNDSSA-----------------------------PSARVQQGQDLRGGDSGANESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPVGS----RSWAASLGLRKSSALNGAAGANGGADGADEAGV--TVGQILGLNGSXXXXXXXXXXXXXXXXXXXVPGARMGLCGKRTVPRALSAGGNRVFETLPGESYFRGRPQSGAWAAGXXXXXXXXXXTXXXXX------------------VFAGXXXXXXXXGGRRRWPRVGDSVRAGRCSLAIVIRPAAGAENGDWSGWRHRPTHRVTRQVLLVQLTERSPAAGSGTASQQAPSARCLRHLVAISKGGGQGDAEAIYSFSEV 583
LGSRRLVAIRGAGRRVRIFRLLGR+Y ALVHTRQAYPPK MPC+LL+ASDP GG+KAILHP RDS P P XXXXXXXX EAGPLVGVSVV+DCR+ACTVELLWDVDLTLLGREMGLHPKL A SS ++ + GG GG+++LSSL G+ W+S VSAS RL R RWG RVA GAP +SS+ PS V + GG GXXXXXXXXXXXXXXXXXXXXXXXXX +G VGS RSWAASLGLRKSS N GG DG+D AGV TVGQ LGL G XXXXXXXXXXXXX MGLCGKRTVPRALSAG RVF TLPGESYFRGR Q G W AG X G R WPRVGD VRAGRCSLAIVIRPAAG E GDW GWRHRPTHRVTRQ+ LVQLTERS A G SQQAPSARCLRHLVA+SKGG GD E+IYSF+EV
Sbjct: 47 LGSRRLVAIRGAGRRVRIFRLLGRNYXXXXXXXXXXXALVHTRQAYPPKTMPCSLLVASDP---GGVKAILHP-----RDSDDNI----------PVDPRPPXXXXXXXXXXXXXXXXGALGARAEAGPLVGVSVVLDCRIACTVELLWDVDLTLLGREMGLHPKLRTA-AGAAAASSSPTDRFDVGGG--------------------------------GGLSSLSSLPGNAWASAVSASRRLFRAGRE--RWGSRVA---GAPPESSSRPSXXXXXXXXXXXXXXXXXXXXXXXXXYPSNNVDE---EMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXXXXGASAAEAVLASLDGPGARRAGTGNVGSGGAGRSWAASLGLRKSSVFNA-----GGEDGSDTAGVGWTVGQALGLGGXXXXXXXXXXXXXXGI---------MGLCGKRTVPRALSAGRGRVFTTLPGESYFRGRQQGGEWNAGATATSAAGAAKVGGGRGGGVDVRXXXXXXXXXXXXXXXXGAGERPAAGGRDWPRVGDPVRAGRCSLAIVIRPAAGEETGDWVGWRHRPTHRVTRQIWLVQLTERS-AGVDGAPSQQAPSARCLRHLVAMSKGG-DGDPESIYSFAEV 608 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9287.20237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-firma_M_contig9287.20237.1 ID=prot_S-firma_M_contig9287.20237.1|Name=mRNA_S-firma_M_contig9287.20237.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=583bpback to top |