mRNA_S-firma_M_contig926.20209.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 1.260e-159 Identity = 246/270 (91.11%), Postives = 258/270 (95.56%), Query Frame = 1
Query: 1 MSGGGEGGQVAGEEADKSSMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASVVTMTAV 810
MSGGGEGGQ A EE DKS MSASVFNLAKNILGAGMLSLP+GVAAFSDS+KAI+PA+LIIA LGAVSAYTFVLIGRSCAET AESYEQSWARTVGQ+SAW+PAGACVATCFAGCLAFT+IIGDSFS+LAKTFGAPA+VA RSNIIMAVSA VLLPLSLLKNLKSLGFTSMLGTSGL+YTAVMMAIRFFDGSYAAGGKFHALLPA GAPVF KGTNPICFLVLVSMLSTAYEAHFNAPLFYREL++NTVPRYSKMVSTSFLASV TMTAV
Sbjct: 81 MSGGGEGGQAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSKKAIIPASLIIAVLGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQRSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAV 350
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: D7FJZ0_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI) HSP 1 Score: 248 bits (634), Expect = 3.020e-76 Identity = 126/242 (52.07%), Postives = 174/242 (71.90%), Query Frame = 1
Query: 67 SVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASV 792
S+FNL KN++GAG+L++P GV AFS SR A+VP +I ALG +S Y F LIGR CA TGA SY +W++T+G+K++W+P +C A F C+A+++IIGD F+ + FGAP V+A R+NI+ VSA+VLLPL LLK+L +L +TS++G G +YTA +M IR+FD SY GG+F A L PVF G L+LVSMLSTA+ AHFNAP FY EL++ +VPR++ +V +SF A++
Sbjct: 70 SIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAFGAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARPVFSGTGAMNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPRFNTVVGSSFAAAI 311
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.270e-73 Identity = 131/251 (52.19%), Postives = 184/251 (73.31%), Query Frame = 1
Query: 49 KSSMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKF-HALLPAGGAPVF-GVKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASVV 795
K+ + S+FNL KNI+G+G+L+LP GVAAFS +R A+VPA+++I LG +S Y F LIGR+CA T A SY +WA TV K+ WMP + VA F CL++++IIGD+F++LA+TF APA +A R I+ A+S V LLPL L+ +L L +TS++G +G +YTA +MA+R+FDGSYA GG+F +A A P+F G NP+ L+LVSMLST++ AH+NAP FY EL++ TVP+Y+ +V TSF AS++
Sbjct: 26 KAEVGGSIFNLVKNIVGSGILALPGGVAAFSHARGAVVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTSIVGIAGTLYTAGVMALRYFDGSYALGGRFFNAAASAAKGPLFTGSAALNPLS-LILVSMLSTSFIAHYNAPKFYHELKDKTVPKYNTVVGTSFGASIL 275
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A835Z2K9_9STRA (Aa_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K9_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.500e-71 Identity = 149/260 (57.31%), Postives = 175/260 (67.31%), Query Frame = 1
Query: 1 MSGGGEGG--QVAGEEADKSSMSASVFNLAKNILGAGMLSLPS------------GVAA------FSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIR-----------------FFDGSYAAGGKFHALLPAGGAPVFGVKGTNPICFLVL 669
MSGG GG A EADKS+M+ SVFNL KNI+ A + + VAA D+R AI PA IIAALGA+SAYTF LIGRSCA+T AESYEQ+W+R V +SA +PAGACVATCFAGCLA+TLIIGD+FS+LA+T GAPA VA RS +I +SA VLLPLSLL+NL +LGFTSMLGT GL+YTA MM +R +FDGSYA G+F LLPA PVFG+K NP+ FLVL
Sbjct: 63 MSGGSAGGGEASAATEADKSTMTQSVFNLVKNIMEAMTHAHHATHCVHRARRRRHAVAAGGRRRVLRDARGAIAPAGAIIAALGALSAYTFSLIGRSCAQTKAESYEQAWSRAVSPRSAALPAGACVATCFAGCLAYTLIIGDTFSALARTAGAPARVAARSTVIGVLSAGVLLPLSLLRNLSALGFTSMLGTGGLLYTAGMMGLRVLTNTLFVAAAAALMRRYFDGSYAPSGRFFNLLPAAAQPVFGMKKANPLLFLVL 322
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 236 bits (602), Expect = 2.710e-71 Identity = 128/251 (51.00%), Postives = 179/251 (71.31%), Query Frame = 1
Query: 64 ASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGTN--PICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASVVTMTAV 810
AS+FNL K+I+GAG+L+LP GVAAFSD+ A+ AA + A+G +SAY F LIGR CA A++Y +WA+++ K+AW+PA AC GC+ +++IIGD+ S+LA+TFG PAV+A R+NI++ ++ V+ PL LLKNLKSL FTS+LG G +YT V MAIR DGSY GG+F +PA P F VKG + + L+LVSMLSTA+ AH+NAP FY +L+ +VPRY+K+V SF +++ ++
Sbjct: 80 ASIFNLVKSIVGAGVLALPGGVAAFSDAPGAMAAAAGLTGAMGLLSAYCFSLIGRVCAAYDAKTYFDAWAKSISPKTAWLPAFACNFKTLIGCILYSIIIGDTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPA--QPSFNVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSI 328
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: F0Y682_AURAN (Uncharacterized protein AOT7 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y682_AURAN) HSP 1 Score: 221 bits (562), Expect = 4.160e-66 Identity = 128/258 (49.61%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 49 KSSMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGG--APVFGVKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASVVTMTAVRT 816
KSS+ AS NLAKNI+G+G+L+LP+GVAA+S +R A PA L+IAALGAVSAY F L+GR+CA TG +Y +W +TVG + + G C GC+++ +IIGD+ ++LAK GAPA++A R ++ V A VL PLS+L++LKSL TSMLG +G++YTA+++ +R DGSYA GK A L A G P FG G++P L+LVSML+T++ AH+NA FY EL+N T+ RY + F +V AV T
Sbjct: 50 KSSVPASTLNLAKNIVGSGVLALPAGVAAYSSARGASAPACLLIAALGAVSAYCFALVGRACAATGTSTYRGAWEKTVGPGTGGLITGICSFKTLVGCVSYCIIIGDTGTALAKKLGAPALLARRDVLLSTVGAAVLFPLSMLRDLKSLAPTSMLGLAGMLYTALVVVLRGLDGSYAGDGKMLAALVAEGKPTPAFGT-GSSPGGALLLVSMLATSFIAHYNAANFYVELENPTLARYGTVAGAGFSIAVAFFCAVAT 306
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A1Z5J5N4_FISSO (Aa_trans domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5N4_FISSO) HSP 1 Score: 217 bits (552), Expect = 8.110e-65 Identity = 117/243 (48.15%), Postives = 170/243 (69.96%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGT--NPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASV 792
+FNL K I+GAG+LSLP+G+A + ++ A+ PA +IAA+G++SAY F LIGRSCA TG +++ Q+W+ V +KS+W+PA + LA+++I+GD+F+SL T G ++S ++ V++ +LLPL LLKNL +L S+LG+ G++YTA+ MAIR+F +YA GGKF LP P FG + + NP +L+ MLSTAY AHFNAP FY EL++NT+PRY K+V+TSF S+
Sbjct: 65 IFNLVKGIVGAGVLSLPAGIAKYGNAPGAVAPAVFLIAAIGSLSAYGFALIGRSCALTGTKTFRQAWSAAVSEKSSWIPAWSVTLKTMFAVLAYSMILGDTFASLLATAG---FAVSKSMALVGVTSTLLLPLCLLKNLNALAPFSLLGSLGMVYTAIAMAIRYFSKAYAVGGKFAKDLPVNLQPAFGTQSSVFNPAS-TILLGMLSTAYMAHFNAPKFYTELKDNTIPRYVKVVATSFAISI 303
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A7S2W0Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0Q8_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.760e-64 Identity = 111/239 (46.44%), Postives = 164/239 (68.62%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGTNPICF---LVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTS 777
+FNL K+I+GAG+LSLP+G+AAF ++ A++P+A++I +G++SAY F LIGR CA+TGA SY ++W +TVG ++WMPA + CF LA+++I+ D+F +L FG +R N++ ++ +VL+PL L+KNL SL S+LG G+ YT + M IR+FDGSY GKF + P FG G + + L+L+ MLSTAY AHFNAP FY EL++NT+ RY+ +V++S
Sbjct: 110 IFNLVKSIVGAGVLSLPAGIAAFGNAPSAVLPSAILILVIGSISAYGFSLIGRVCADTGARSYREAWEKTVGSSTSWMPAASSTFNCFIANLAYSMILADTFKNLLSGFGMEI---SRQNVLFGITLIVLIPLCLMKNLSSLAPFSLLGIMGMAYTILAMGIRYFDGSYGTDGKFLVDVAENLKPSFGDNGASAVMSPKSLILICMLSTAYMAHFNAPKFYIELKDNTIKRYNAVVTSS 345
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A7S2VHC0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHC0_9STRA) HSP 1 Score: 215 bits (548), Expect = 2.970e-64 Identity = 113/242 (46.69%), Postives = 167/242 (69.01%), Query Frame = 1
Query: 79 LAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGTNPICF---LVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASVV 795
+ K I+G G+LSLP+G+AAF D+ A +PAA++IA++G+++AY F L+GR CA TGA SY+ +W TVG +AW+P +CV F LA+++++GD+FS+L +TFG +R ++ ++ VL+PL LK+L SL S++G +G++YTA+ MA+RFFDGSYA GGK A + P G KG + + +L+ MLSTAY AHFNAP FY EL+NNT+ R++ V+TSF S++
Sbjct: 1 MVKAIVGVGVLSLPAGIAAFGDAPSASIPAAILIASIGSIAAYNFSLLGRLCAMTGATSYKSAWEETVGASTAWIPGSSCVIKTFFAVLAYSMVLGDTFSALFETFGFNV---SREKALIGLTVTVLMPLCKLKDLSSLAPFSLVGIAGMLYTALAMAVRFFDGSYAEGGKLAADVAESLRPALGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELENNTIARWNTCVATSFSISIL 239
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Match: A0A1Z5JSY6_FISSO (Aa_trans domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY6_FISSO) HSP 1 Score: 217 bits (552), Expect = 1.100e-63 Identity = 117/243 (48.15%), Postives = 170/243 (69.96%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAALIIAALGAVSAYTFVLIGRSCAETGAESYEQSWARTVGQKSAWMPAGACVATCFAGCLAFTLIIGDSFSSLAKTFGAPAVVANRSNIIMAVSAVVLLPLSLLKNLKSLGFTSMLGTSGLIYTAVMMAIRFFDGSYAAGGKFHALLPAGGAPVFGVKGT--NPICFLVLVSMLSTAYEAHFNAPLFYRELQNNTVPRYSKMVSTSFLASV 792
+FNL K I+GAG+LSLP+G+A + ++ A+ PA +IAA+G++SAY F LIGRSCA TG +++ Q+W+ V +KS+W+PA + LA+++I+GD+F+SL T G ++S ++ V++ +LLPL LLKNL +L S+LG+ G++YTA+ MAIR+F +YA GGKF LP P FG + + NP +L+ MLSTAY AHFNAP FY EL++NT+PRY K+V+TSF S+
Sbjct: 112 IFNLVKGIVGAGVLSLPAGIAKYGNAPGAVTPAVFLIAAIGSLSAYGFALIGRSCALTGTKTFRQAWSAAVSEKSSWIPAWSVTLKTMFAVLAYSMILGDTFASLFATAG---FAVSKSTALIGVTSTLLLPLCLLKNLNALAPFSLLGSLGMVYTAIAMAIRYFGKAYAVGGKFAKDLPVSLQPAFGTQSSVFNPAS-TILLGMLSTAYMAHFNAPKFYTELKDNTIPRYVKVVATSFAISI 350 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig926.20209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig926.20209.1 >prot_S-firma_M_contig926.20209.1 ID=prot_S-firma_M_contig926.20209.1|Name=mRNA_S-firma_M_contig926.20209.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=274bp MSGGGEGGQVAGEEADKSSMSASVFNLAKNILGAGMLSLPSGVAAFSDSRback to top mRNA from alignment at S-firma_M_contig926:22973..26281+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig926.20209.1 ID=mRNA_S-firma_M_contig926.20209.1|Name=mRNA_S-firma_M_contig926.20209.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3309bp|location=Sequence derived from alignment at S-firma_M_contig926:22973..26281+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig926:22973..26281+ >mRNA_S-firma_M_contig926.20209.1 ID=mRNA_S-firma_M_contig926.20209.1|Name=mRNA_S-firma_M_contig926.20209.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1644bp|location=Sequence derived from alignment at S-firma_M_contig926:22973..26281+ (Sphaerotrichia firma Sfir_13m male)back to top |