mRNA_S-firma_M_contig921.20158.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig921.20158.1
Unique NamemRNA_S-firma_M_contig921.20158.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 682 bits (1760), Expect = 3.770e-228
Identity = 452/749 (60.35%), Postives = 492/749 (65.69%), Query Frame = 2
Query:  107 MVQKWAIGAMINISGSIAINLGTNLMKLSHKMEKGEAPPQPTDGDKHASFRTTAQKQKPSATMSSDDLEAAESMLINPSSAANPARRQQPQQFPSSKGXXXXXXXGNITRT-HGVEMTTYSAVSVSEDAE-----PDVQHAAGSEPARTATGAGTSKGRDFVAGXXXXXXXXXXXXXXXXXXX-GLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLGKSQPRGGRRKSLTSSSSPFSNGTGSSKANGHAKEPGARREYDEHNPGVRRRALSSPSSPHQDLLASCSSTCSGEESYSGRGGGDQQF----------------------EWKTKALWYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLCLELASALAMHATYKSFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRRAGAG-AGEDGVGSDGEASDLTRMLRLDD-ESPAPSPVYAGSNGCLSPGRS--MDTS-MEAGDEEIDWDHTRMLSLGFFPSISTDQDVAKMGMGKLTNNFEGIHDGEARDS---HGHAGGSARVTDAAHRQ--STLLPPPWSKPKDTPPRPNSPSNNI 2236
            MVQKWAIGAMINISGSIAINLGTNLMKLSHKM+KGE       GD + S        KPS     DDLEAAE M+       N A             XXXXXX  +  R  HGVEMT Y   ++ ++       PD +       AR   G G  +G      XXXXXXXXXX          GLTE                            K+                     G +K  G  K  G   EYDEH PGVR+R L+   SP+Q            E  ++                               EW   ALWYLGAVLLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILRE+VTRRII+GTATIILGNTLTLCFSPHQDDNFSTH+LKAFYD EYNTLL LELA ALAMHA YKSFKRSKEQG+PRR+SDLVMPLAYAICSAI+GTQSVVNAKCLSELLTLTFQGENQ+GS FTYLV AIWLGTTIFWLVRMN+ALAMFHGLFIIPALQVFWTFFSVI GGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGR AG G  GE  V SDGE SDL +MLRL+  +SPAPSP +AG+   LS G+S  +DTS MEAGDEEIDWDHTRMLS+GFFPSISTDQDVAKMGMGKL    EG+  G   +    HG A G AR  D+  R+    LLP PWSKPKDTPPRP+SP+ N+
Sbjct:    1 MVQKWAIGAMINISGSIAINLGTNLMKLSHKMKKGEYR---QHGDDNTSNNAIRSGLKPS---DDDDLEAAEPMI-------NRAANDXXXXXXXXXXXXXXXXSRSAQRAQHGVEMTAYPIDALVQERGGPGRVPDSESITNGG-ARAGGGIGKLRGXXXXXXXXXXXXXXXXRGGADEEEMVGLTEESLTESPSSTTGVSTSSDDRAAQHSRGRKALASPXXXXXXXXXXXXXXXKGGHAKGTGPPKRAG---EYDEH-PGVRKRPLNI--SPNQGGXXX-------EXGFAXXXXXXXXXXXXXXXXXXXXXXWEQPPTTPPEWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFQGENQLGSIFTYLVFAIWLGTTIFWLVRMNQALAMFHGLFIIPALQVFWTFFSVIDGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRHAGVGDGGEAAVDSDGEESDLRKMLRLEAVKSPAPSPAFAGTEASLSRGQSQSLDTSSMEAGDEEIDWDHTRMLSIGFFPSISTDQDVAKMGMGKLNARVEGVAPGAGEERGRIHGRADG-ARAADSPSRKIAGPLLPLPWSKPKDTPPRPDSPTGNV 721          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE)

HSP 1 Score: 558 bits (1438), Expect = 2.530e-183
Identity = 362/626 (57.83%), Postives = 389/626 (62.14%), Query Frame = 2
Query:  107 MVQKWAIGAMINISGSIAINLGTNLMKLSHKMEKGEAPPQPTDGDKHASFRTTAQKQKPSATMSSDDLEAAESMLINPSSAANPARRQQ-----------PQQFPSSKGXXXXXXXGNITRTHGVEMTTYSAVS-VSEDAEPDVQHAAGSEPART--ATGAGTSKGRDFVAGXXXXXXXXXXXXXXXXXXX---GLTEXXXXXXXXXXXXXXXXXXXXXXXXXXLGKSQPRGGRRKSLTSSSSPFSNGTGSSKANGHAKEPGARREYDEHNPGVRRRALSSPSSPHQDLLASCSSTCSGEESYSGRGG-----------------GDQQF--EWKTKALWYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLCLELASALAMHATYKSFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRRAGAGAGEDGVG-SDGEASDLTRMLRLD 1873
            MVQKWAIG MINISGSIAINLGTNLMKLSHKM+KGE      D   + + R+  +          DDLEAAE M+   ++ +                  P    S+KG             HGVEMT Y A + V E   P       SEP     A   G  K R   AG                      GLTE                            K                      G       A+ P    EYD   PGVR+R LS   SP+QD          GEE ++ RGG                  +QQ   EW   ALWYLGAVLLV GSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILRE+VTRRII+GTATIILGNTLTLCFSPHQDDNFSTH+LKAFYD EYNTLL LELA ALAMHA YKSFKRSKEQG+PRR+SDLVMPLAYAICSAI+GTQSVVNAKCLSELLTLTF+GENQ+GS FTYLV AIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVI GGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGR AG G G +  G SDGE SDL RMLRL+
Sbjct:    1 MVQKWAIGTMINISGSIAINLGTNLMKLSHKMKKGEYRQHGDDNTSNNAIRSGLKSSD------DDDLEAAEPMINREANDSXXXXXXXXXXXXXXXHFFPSSLRSAKGAQ-----------HGVEMTAYPADALVQERGGPG--RVPDSEPITNGGARAGGIGKLRGGGAGGSSRDLRGSGEGRGGADEEEMVGLTEESLTDSPSSTTGVSTSSDDRAAQHSRGRKXXXXXXXXXXXXXXXXXXXQAKG-------AEPPTGGGEYDAR-PGVRKRPLSI--SPNQDG--------GGEEGFAERGGLEASGGSXXXXXXXXXAWEQQPPPEWMATALWYLGAVLLVAGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREMVTRRIILGTATIILGNTLTLCFSPHQDDNFSTHELKAFYDAEYNTLLLLELAIALAMHAAYKSFKRSKEQGRPRRHSDLVMPLAYAICSAIVGTQSVVNAKCLSELLTLTFRGENQLGSIFTYLVFAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIDGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRHAGVGGGGEAAGESDGEESDLRRMLRLE 589          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A7R9YAD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD8_9STRA)

HSP 1 Score: 218 bits (555), Expect = 4.860e-58
Identity = 115/266 (43.23%), Postives = 165/266 (62.03%), Query Frame = 2
Query: 1004 TKALWYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLCLELASALAMHATYKSFKRSKEQGKPRR--YSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRR 1795
            T  +WY+G  L+V G ++ F S GFAPQSLLA LGS+QF+SNV+ G+ +L+E VTRR I+ T  ++LG+ L + F  H++ +++   L+  Y + Y   L L L  A  +H  Y  + +  ++G P    Y   V PL+Y   SAIIGTQ  + AK  S ++  T  G+NQ+  P +++ +   +  +IFWLVRMN AL MF GLFIIPALQV W F+ +I GG YF+EF+ L      GF V +L++F GVYLL P  + +  +R
Sbjct:   53 TPKIWYIGVFLMVFGGILVFGSLGFAPQSLLAPLGSIQFVSNVIMGRFLLKETVTRRTIIATVLLMLGSALAVVFGDHEEQSYTLSDLEGLYTVGYVIFLVLVLLLAALLHFVYVKYHKYAKEGGPIAPPYHKYVYPLSYCNTSAIIGTQGAIFAKAASHIVDETISGDNQLKFPLSWVFIFGAIAGSIFWLVRMNSALKMFAGLFIIPALQVCWIFWMIIAGGLYFQEFNGLAAWQICGFVVSILIIFTGVYLLVPVDEEEEMQR 318          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A7S1U9L0_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9L0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.660e-53
Identity = 109/267 (40.82%), Postives = 166/267 (62.17%), Query Frame = 2
Query:  974 GGGDQQFEWKTKALWYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFY-DLEYNTLLCLELASALAMHATYKSFKRSKEQGKPRR-YSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAP 1768
            G GD++   K    W++G  + + GSL+ FASFGFAPQS+LA+L +VQFI+N+ FGK +L E +T+R+++GT  ++ G +L + FS H+   +S+  L++ Y +L Y   L     + +A    +  +   ++QG     Y +LV P++Y   SA+IGTQ ++ AKC+S LL LT  G+NQ    FTY  +A+WL + I+W+ RM+  L +F G FIIP LQV +T  +++ GG YF+EF          F  G +++F GVYLLAP
Sbjct:   69 GEGDEE---KKSWTWFIGTSIFICGSLLLFASFGFAPQSVLAALEAVQFITNIFFGKFVLGEAITKRMVLGTVALVGGMSLVVAFSKHETSLYSSEDLQSLYGELAYIVFLAFAGVTLIASRVLFNVYGARRQQGLENLPYHNLVYPISYCYFSAMIGTQQLLMAKCISNLLRLTGDGDNQFTHWFTYFCIAVWLLSAIYWVYRMDLGLKLFKGPFIIPVLQVHFTLLAIVSGGIYFKEFDGQPPGHICAFVAGCVIIFGGVYLLAP 332          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A2R6W3B2_MARPO (Probable magnesium transporter n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W3B2_MARPO)

HSP 1 Score: 197 bits (501), Expect = 4.990e-51
Identity = 111/266 (41.73%), Postives = 158/266 (59.40%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFY-DLEYNTLLCLELASALAMHATYKSFKR---SKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPRTQTDHGRRAG 1801
            W  G ++   G+ +NF SFGFA QSLLA+LGSVQF+SNV F  ++L E VT RI+  TA I++GN   + F  HQ   ++  +L A Y D  Y     L +   ++ H  YK  +    ++ +     +   ++PL+YAI S  IGT SV+ AK LS L+ LT  GE Q+ + FTYL+  ++LGT  FW+ R+N  LAMF  + I+P LQ+ WTFFS+  G  YFEE+          FA+G+  +F G+ LLAP+T   HG ++G
Sbjct:   73 WRFGVIVFSLGNCLNFISFGFAAQSLLAALGSVQFVSNVGFAYLVLNETVTGRILFATAFIVVGNIFLVAFGNHQSSTYTNEELLANYKDPLYLGYCALLILIVISQHFVYKRGRHLVMTRGEEAVGTFWRTMVPLSYAIVSGAIGTHSVLFAKSLSILMRLTLSGETQLDAFFTYLIFFLFLGTASFWMARLNEGLAMFDAILIVPMLQIAWTFFSIFTGFIYFEEYQVFDGPRASMFALGMFALFLGMSLLAPQTPKGHGTKSG 338          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A7I4DFZ4_PHYPA (Probable magnesium transporter n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DFZ4_PHYPA)

HSP 1 Score: 191 bits (486), Expect = 1.160e-49
Identity = 106/258 (41.09%), Postives = 155/258 (60.08%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLCLELASALAMH-ATYK-----SFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPR 1771
            W +G  +   G+++NF SFG+A QSLLA+LGS+QF+SNV F  ++L E+VTRRI++ T+ I++GN   + F  HQ   +++ QL   Y        C  L   +A+H A Y+     +  R ++ G   R   +++P  YA+ S  +G+ SV+ AK LS LL  T +GENQ+   FTYLV  ++ GT  FW+ R+N  LA+F  + I+P LQ+ WTFFS+  G  YFEE+          F VGVL +F G+ LLAP+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWR---MLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFGRFRAAMFGVGVLALFVGMSLLAPQ 312          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A836BC83_9CHLO (Probable magnesium transporter n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836BC83_9CHLO)

HSP 1 Score: 197 bits (502), Expect = 1.530e-49
Identity = 103/250 (41.20%), Postives = 154/250 (61.60%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLE-YNTLLCLELASALAMHATYKSFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLL 1762
            W +G      G+++NF SFGFA QSLLA+LGS+QF+SNV+F   +LRE + R +I+ T  I+ G  L + F       ++  QL   Y    Y   LCL     +  +  Y    +   +  PR +   ++P+AYA+ SA+IGTQSV+ +K +S +L LTF GENQ+G+ +T+LV+ ++L T +FW+ R+N+ L MF  + I+P +Q+ WT FS+I G  YF+E+     L  + F +GVLVVF GV+LL
Sbjct:   66 WVIGMAFFSVGNILNFTSFGFAAQSLLAALGSIQFVSNVIFAYFVLREPINRMVIIATTCIVGGCVLLVVFGNQSGATYTVKQLTQLYGKPAYVVYLCLMGVGVVGGYMLYLHGSKKVAKNGPRGFWYAILPVAYAVFSALIGTQSVLFSKSMSVILRLTFTGENQLGNWYTWLVLPLFLATAVFWITRLNKGLRMFPAMIIVPVMQISWTLFSIISGMLYFQEYLGFTPLKSIMFPIGVLVVFVGVFLL 315          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A7I4DHS0_PHYPA (Probable magnesium transporter n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DHS0_PHYPA)

HSP 1 Score: 191 bits (486), Expect = 3.230e-49
Identity = 106/258 (41.09%), Postives = 155/258 (60.08%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLCLELASALAMH-ATYK-----SFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPR 1771
            W +G  +   G+++NF SFG+A QSLLA+LGS+QF+SNV F  ++L E+VTRRI++ T+ I++GN   + F  HQ   +++ QL   Y        C  L   +A+H A Y+     +  R ++ G   R   +++P  YA+ S  +G+ SV+ AK LS LL  T +GENQ+   FTYLV  ++ GT  FW+ R+N  LA+F  + I+P LQ+ WTFFS+  G  YFEE+          F VGVL +F G+ LLAP+
Sbjct:   58 WRIGVAIFSFGNILNFISFGYAAQSLLAALGSIQFVSNVFFAYLMLNEVVTRRIVLATSFIVVGNGFLVAFGNHQSVIYTSEQLLRNYGGRVYLTYCFILLCIVAVHHAIYRRGRQLTVSRGEDPGSVWR---MLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGENQLDGLFTYLVFFLFAGTASFWMARLNDGLALFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFGRFRAAMFGVGVLALFVGMSLLAPQ 312          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A2K1K606_PHYPA (Probable magnesium transporter n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K606_PHYPA)

HSP 1 Score: 191 bits (485), Expect = 4.180e-49
Identity = 108/255 (42.35%), Postives = 158/255 (61.96%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLE-YNTLLCLELASALAMHATYKSFKR-SKEQGK-PRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLLAPR 1771
            W +G ++   G+++NF SFG+A QSLLA+LGSVQF+SNV F  ++L EIVTRRII+ T  I++GN   + F  HQ   ++  QL A Y    Y T L + L    A H+ Y+  ++ +  +G+ P     +++P  YA+ S  +G+ SV+ AK LS LL  T +G+NQ+   FTY+V  +++GT  FW+ R+N  LAMF  + I+P LQ+ WTFFS+  G  YFEE+          F +GVL +F G+ LLAP+
Sbjct:   60 WRIGVIVFSLGNILNFISFGYAAQSLLAALGSVQFVSNVFFAYLMLNEIVTRRIILATVFIMVGNGFLVAFGNHQSVIYTHGQLLASYKGHIYLTYLFILLCIVAAHHSIYRRGRQLAASRGEDPVGVWRMLLPYTYAVVSGAVGSHSVLFAKSLSVLLRSTLEGDNQLDGWFTYIVFFLFVGTASFWMARLNDGLAMFDAILIVPMLQIVWTFFSIFTGFIYFEEYRVFDHFRATMFGIGVLALFVGMSLLAPQ 314          
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Match: A0A150GTP1_GONPE (Probable magnesium transporter n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTP1_GONPE)

HSP 1 Score: 194 bits (492), Expect = 1.510e-48
Identity = 100/250 (40.00%), Postives = 156/250 (62.40%), Query Frame = 2
Query: 1016 WYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILREIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLE-YNTLLCLELASALAMHATYKSFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVVNAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFHGLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVYLL 1762
            W +G      G+++NF SFGFA QSLLA+LGS+QF+SNV+F   +L E + R +++ TA+I+ G  L + F       ++  QL   Y    Y T LCL     +  +  Y   ++   +   R +   ++P+AY++ SA+IGTQSV+ +K +S +L LTF G+NQ+G+ +T+LV+ ++L T IFW+ R+N+ L MF  + I+P +Q+ WT FS++ G  YF+E+     L  + F +GVLVVF GV+LL
Sbjct:   60 WAIGMAFFSAGNILNFVSFGFAAQSLLAALGSIQFVSNVIFASFVLHEPINRLVLIATASIVGGCVLLVVFGNQSSATYTVKQLTQLYGKPAYVTYLCLLGVGVVGGYLLYLHGQKMVNKNGQRGFWYAILPVAYSVFSALIGTQSVLFSKSMSVILRLTFSGDNQLGNWYTWLVLPLFLLTAIFWITRLNKGLRMFPAMVIVPVMQISWTLFSIVSGMLYFQEYVGFTPLKSIMFPIGVLVVFVGVFLL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig921.20158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H4_ECTSI3.770e-22860.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6Y8_9PHAE2.530e-18357.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9YAD8_9STRA4.860e-5843.23Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1U9L0_9STRA3.660e-5340.82Hypothetical protein n=6 Tax=Phaeomonas parva TaxI... [more]
A0A2R6W3B2_MARPO4.990e-5141.73Probable magnesium transporter n=2 Tax=Marchantia ... [more]
A0A7I4DFZ4_PHYPA1.160e-4941.09Probable magnesium transporter n=1 Tax=Physcomitri... [more]
A0A836BC83_9CHLO1.530e-4941.20Probable magnesium transporter n=2 Tax=Chlamydomon... [more]
A0A7I4DHS0_PHYPA3.230e-4941.09Probable magnesium transporter n=4 Tax=Physcomitri... [more]
A0A2K1K606_PHYPA4.180e-4942.35Probable magnesium transporter n=2 Tax=Physcomitri... [more]
A0A150GTP1_GONPE1.510e-4840.00Probable magnesium transporter n=1 Tax=Gonium pect... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig921contigS-firma_M_contig921:604..7860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score698.0
Seed ortholog evalue5e-198
Seed eggNOG ortholog2880.D7G9H4
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0012505,GO:0015693,GO:0016020,GO:0030001,GO:0031410,GO:0031982,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0070838,GO:0071944,GO:0072511,GO:0097708
EggNOG free text desc.magnesium ion transmembrane transporter activity
EggNOG OGsKOG2922@1,KOG2922@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons10
Model size3470
Cds size2283
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig921.20158.1prot_S-firma_M_contig921.20158.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig921 1231..6779 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828748.2429044-UTR-S-firma_M_contig921:603..6861622828748.2429044-UTR-S-firma_M_contig921:603..686Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 604..686 +
1697105138.4574764-UTR-S-firma_M_contig921:603..6861697105138.4574764-UTR-S-firma_M_contig921:603..686Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 604..686 +
1622828748.2583818-UTR-S-firma_M_contig921:1207..12301622828748.2583818-UTR-S-firma_M_contig921:1207..1230Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 1208..1230 +
1697105138.4684927-UTR-S-firma_M_contig921:1207..12301697105138.4684927-UTR-S-firma_M_contig921:1207..1230Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 1208..1230 +
1622828748.3945358-UTR-S-firma_M_contig921:6779..78601622828748.3945358-UTR-S-firma_M_contig921:6779..7860Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 6780..7860 +
1697105138.5739472-UTR-S-firma_M_contig921:6779..78601697105138.5739472-UTR-S-firma_M_contig921:6779..7860Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig921 6780..7860 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828748.2700338-CDS-S-firma_M_contig921:1230..13231622828748.2700338-CDS-S-firma_M_contig921:1230..1323Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 1231..1323 +
1697105138.4792233-CDS-S-firma_M_contig921:1230..13231697105138.4792233-CDS-S-firma_M_contig921:1230..1323Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 1231..1323 +
1622828748.2817404-CDS-S-firma_M_contig921:1621..26621622828748.2817404-CDS-S-firma_M_contig921:1621..2662Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 1622..2662 +
1697105138.4881308-CDS-S-firma_M_contig921:1621..26621697105138.4881308-CDS-S-firma_M_contig921:1621..2662Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 1622..2662 +
1622828748.293632-CDS-S-firma_M_contig921:3034..33071622828748.293632-CDS-S-firma_M_contig921:3034..3307Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 3035..3307 +
1697105138.4975574-CDS-S-firma_M_contig921:3034..33071697105138.4975574-CDS-S-firma_M_contig921:3034..3307Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 3035..3307 +
1622828748.3091762-CDS-S-firma_M_contig921:3695..38151622828748.3091762-CDS-S-firma_M_contig921:3695..3815Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 3696..3815 +
1697105138.5081782-CDS-S-firma_M_contig921:3695..38151697105138.5081782-CDS-S-firma_M_contig921:3695..3815Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 3696..3815 +
1622828748.327945-CDS-S-firma_M_contig921:4060..41651622828748.327945-CDS-S-firma_M_contig921:4060..4165Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 4061..4165 +
1697105138.5184772-CDS-S-firma_M_contig921:4060..41651697105138.5184772-CDS-S-firma_M_contig921:4060..4165Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 4061..4165 +
1622828748.3441598-CDS-S-firma_M_contig921:4722..48581622828748.3441598-CDS-S-firma_M_contig921:4722..4858Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 4723..4858 +
1697105138.5286448-CDS-S-firma_M_contig921:4722..48581697105138.5286448-CDS-S-firma_M_contig921:4722..4858Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 4723..4858 +
1622828748.356266-CDS-S-firma_M_contig921:5467..56281622828748.356266-CDS-S-firma_M_contig921:5467..5628Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 5468..5628 +
1697105138.540078-CDS-S-firma_M_contig921:5467..56281697105138.540078-CDS-S-firma_M_contig921:5467..5628Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 5468..5628 +
1622828748.3684828-CDS-S-firma_M_contig921:6072..62001622828748.3684828-CDS-S-firma_M_contig921:6072..6200Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 6073..6200 +
1697105138.550301-CDS-S-firma_M_contig921:6072..62001697105138.550301-CDS-S-firma_M_contig921:6072..6200Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 6073..6200 +
1622828748.3820374-CDS-S-firma_M_contig921:6553..67791622828748.3820374-CDS-S-firma_M_contig921:6553..6779Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 6554..6779 +
1697105138.562081-CDS-S-firma_M_contig921:6553..67791697105138.562081-CDS-S-firma_M_contig921:6553..6779Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig921 6554..6779 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig921.20158.1

>prot_S-firma_M_contig921.20158.1 ID=prot_S-firma_M_contig921.20158.1|Name=mRNA_S-firma_M_contig921.20158.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=761bp
MVQKWAIGAMINISGSIAINLGTNLMKLSHKMEKGEAPPQPTDGDKHASF
RTTAQKQKPSATMSSDDLEAAESMLINPSSAANPARRQQPQQFPSSKGKG
KGKGMGNITRTHGVEMTTYSAVSVSEDAEPDVQHAAGSEPARTATGAGTS
KGRDFVAGGGGGGGGRGGAGVYEEETVGLTEESLTDSPSSAAGVSTNSDD
HHRAGLLLGKSQPRGGRRKSLTSSSSPFSNGTGSSKANGHAKEPGARREY
DEHNPGVRRRALSSPSSPHQDLLASCSSTCSGEESYSGRGGGDQQFEWKT
KALWYLGAVLLVGGSLVNFASFGFAPQSLLASLGSVQFISNVVFGKVILR
EIVTRRIIVGTATIILGNTLTLCFSPHQDDNFSTHQLKAFYDLEYNTLLC
LELASALAMHATYKSFKRSKEQGKPRRYSDLVMPLAYAICSAIIGTQSVV
NAKCLSELLTLTFQGENQMGSPFTYLVMAIWLGTTIFWLVRMNRALAMFH
GLFIIPALQVFWTFFSVIGGGFYFEEFHTLHVLGGLGFAVGVLVVFCGVY
LLAPRTQTDHGRRAGAGAGEDGVGSDGEASDLTRMLRLDDESPAPSPVYA
GSNGCLSPGRSMDTSMEAGDEEIDWDHTRMLSLGFFPSISTDQDVAKMGM
GKLTNNFEGIHDGEARDSHGHAGGSARVTDAAHRQSTLLPPPWSKPKDTP
PRPNSPSNNISGRAAPSPLGAAATAADQQVGGTDVDIEGGGNRDRDGDTE
RRRRRAGGAA*
back to top

mRNA from alignment at S-firma_M_contig921:604..7860+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig921.20158.1 ID=mRNA_S-firma_M_contig921.20158.1|Name=mRNA_S-firma_M_contig921.20158.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=7257bp|location=Sequence derived from alignment at S-firma_M_contig921:604..7860+ (Sphaerotrichia firma Sfir_13m male)
TGCACTTTGGCCTCATTCCTCTTTTGCCAGTTGCCACTTTGCGGCGCTTC CTGCGCGTACTCCCCTTGTGCCGACACCAGGTGGTGAGTATTCATCATCA GTAGAGGTTGCCGTCGATCTTACGCTGACGTATTCTGAAGCCTGGTGCTG GAGTGGTTCTGTTGTTCGAATAAACGGTACCCTTTCAGCTGGGTGTGTTC TTCGTTTTTGATGCCCCACACCAGTGCCGAGCTGCTGGTGCGTGTTCGCA CGGGTGTCGCTGCGGTGGTTGAGAGAGGAATACTGACACAATGTGCCCGT ACTGCTTTGCGTGCACCCCAGTAGCTGCACGTGCGTGGCTCCAGCTCAAC CAAATATGAATAATCCAAAATCCAACGAATCATTCCGGTACATTTTCTCC GGCGTGAGAGTGAGGACTGATGCGTTTTCCCGATATGTCGCGTACCGCTG TAGGTTAGCTGCCCTCATCTAGAGCACGATACAGCCACGGTTCTAACGAC CACCGCACGTGACTTTCAGGAAAGCCACTTGTCAGCGACCGTGCGATCTT CCCTAAGCATTTCGCTCTGTTCCGCATTGCCAATAAATATTGATCGACGC ACAGCCAGGGGCGGTGGTGTCGACACCATGGTGCAGAAATGGGCTATCGG CGCGATGATCAACATCTCGGGTTCCATCGCCATCAACTTGGGCACCAACC TCATGAAGCTATCACATAAGGTGAAGACTCGTGTAGGTAGACAAACCCAA GACAAACAAGAGGCACTACTGCTGTTGCTGTGTAGTCTGAGGGATTAGCG TGCAGGATCAGCAGTAAATGCGGCGATCTGAGATGGCCAACCGATTCTCA AGCGTTGATTGTATGTCTGCTGTAAATCGCGCTCAATCGCGACACTTGGA TACCTCGCTGCACCAAGCCGTTGGGATTTTAATACCATAACCCTCAGGGG GCTCTCAACCTTCATCCCACTCGTTGCGTTTGTTTGGTGTTCCTTCTTTT TCTCCCTTGATGGCCCAGATGGAGAAAGGGGAGGCGCCGCCCCAGCCGAC CGACGGCGACAAGCACGCCTCCTTTCGGACGACGGCACAGAAACAGAAAC CCTCGGCCACCATGTCCTCGGACGACCTAGAAGCCGCCGAGTCGATGCTC ATCAACCCCAGTTCCGCCGCCAACCCCGCCCGGCGCCAGCAGCCACAGCA ATTCCCTTCCTCCAAAGGCAAGGGCAAGGGCAAAGGCATGGGCAACATCA CCCGGACGCACGGGGTAGAGATGACCACCTACTCTGCGGTCTCGGTTTCG GAAGACGCGGAACCCGACGTCCAACACGCTGCGGGTTCGGAACCGGCAAG AACAGCAACAGGAGCAGGCACTAGTAAGGGTAGGGATTTTGTTGCAGGCG GAGGCGGCGGCGGCGGCGGGAGAGGGGGCGCGGGGGTCTACGAGGAGGAG ACGGTGGGGCTCACGGAGGAATCACTGACGGACTCGCCTTCCTCCGCGGC GGGGGTGAGTACGAACTCGGACGACCACCACCGGGCGGGGCTGCTGCTAG GAAAGTCACAACCAAGAGGAGGCCGCAGAAAAAGCTTGACGTCGTCTTCT TCGCCTTTTTCCAACGGGACCGGCAGCAGCAAGGCGAACGGCCACGCCAA GGAGCCCGGAGCCAGGAGGGAGTACGACGAGCACAACCCTGGCGTGAGAA GGAGGGCCCTGAGCAGCCCTAGCAGCCCCCACCAGGATTTGCTCGCGAGC TGCAGCAGCACCTGCAGCGGCGAGGAGAGCTATTCTGGTAGAGGGGGGGG GGACCAGCAGTTCGAGTGGAAGACGAAGGCGCTGTGGTACCTGGGCGCGG TCCTGCTGGTCGGGGGCAGCCTGGTGAACTTCGCGTCGTTCGGGTTCGCG CCGCAGAGCCTGCTGGCCAGCCTCGGGTCGGTGCAGTTCATCTCGAACGT GGTGTTCGGGAAGGTGATTTTGAGGGAGATCGTCACGAGGAGGATCATCG TCGGGACCGCGACCATCATCCTGGGGAACACGCTCACGCTCTGCTTCAGC CCTCATCAGGTCTGTCTGTCTGGGTGCGGTGGTTGTGTGGTTGGTGGGTC GAGGGGGTCGGTCATCGGGAGCGGTTTGGATATGGCGTACGTGTGTGTGT CAGAGAGAGAGAGAGAGAAAGAGAGAGAAGGGACATATTGCCGGCAGATA AGGCAGGGTTGAAAGGGCGGCCAGAGATGTGTGTGTAACCTTTGAACGTG GTGGCGAGAGTCGTAACACCGTTAAATTCCTCCGTCTGTTTACACACACA TATCAATCCATTATGTGGCGCACCGAAAGCTACGACCTCGAAGTCCTCTT AACCCATCAACCCGGCTGTCCGTTGCTGCTTCCTGGGTTCTTGTTTCTTC GTGTTGTGTTGCTTTGTGCCCCCGCGGCCAGGACGACAATTTCAGCACCC ACCAGCTTAAGGCCTTCTACGACCTGGAGTACAACACGCTCCTGTGCCTC GAGCTGGCCTCCGCGCTCGCGATGCACGCAACCTACAAGAGCTTCAAGAG GAGCAAGGAGCAGGGGAAGCCGAGGCGCTACTCCGACCTGGTCATGCCCC TGGCCTACGCCATCTGCTCGGCCATCATCGGCACGCAGAGCGTCGTGAAC GCCAAGTGCCTGAGCGAGCTGCTGACGTTGACGTTCCAGGGTGAAAATCA GATGGTGAGTGAGAGATTGAGTGAGCTTGAGAAGCCAAGAAGCGGGGGGG CGGTGGCAGGTCTGGATGGGCTTTCTTCTTCCAGTGGGTCTCGTCGAAGA GTTCCTACTCGGTTGATGCTTACCCGACTATTTTTTCGTCTCAGCGTTTG TGGGTGTGTTGGTCTTGTACGTCTTGTCCTCCTGGCTCTGTTTTCGAAAG CGTCGGACTTCAACCTGCCTGCCCGATGAGTCGACTTTCTTGCCTTGTCT CGAATTGAAGAGAAAGGCTAACCTAGCCGGTCCGTGTTCAGACCTGCTAT TGTAGTGCTGTCCTCTTTGTGTTGCTTACCGGCGGCGCTACCACTAACTT GTCCTCGATCGGTTGTTCGTTCGATTCGATTGGCGCCAACAGGGGTCGCC GTTCACCTACCTGGTGATGGCCATCTGGCTCGGCACGACAATATTTTGGT TGGTCCGGATGAACCGCGCCCTGGCGATGTTCCACGGGCTTTTCATCATT CCGGCCTTGCAGGTACGTAATTGGTACATACGTAGGCGAACCATCGTCGT CGCTCGTTGCTGTCTGATGGTCGTCCGTCTGTACTTGATTGTACGTCTAC TTGGCTCAGTGCATACGACAAGGAAGAAGATGCCATGGAAGACCTGATCT ACGTACATCGTAAAAAACGCCTTTTCTGAGTTTCTTTCTGGGTTGAATCG GTGACGCGATGCTTTCGCGTTTTGTTTTACTCGTGCGATCTATCTACGCA ACACCAGGTGTTCTGGACGTTTTTCTCCGTGATCGGTGGCGGCTTCTACT TCGAGGAGTTCCACACGCTGCACGTTCTAGGAGGCTTGGGGTTCGCTGTG GGGGTGTTGGTGGTGAGTGTCAGCGGACGAACGTAACGAACAACAGACAA ACTACCTGATCATTGGCACTACGATGTTGCGGTCACCACACTACCGCACT GCTGTAGTTTGGACGGGTGCGCAGTCAGCTTTGCAGCAGCGCATGGGATT TTCTCTCCGTTTGGACCGATACAAATCAGGCCATGGAAAGCACTTGAGAG TAGCTCTTCACCACCGGTTTGGGTCACCAGCAGGAGCGCAACGCATGAGA CACACAAGATGCGAGGGAGCGCCAATACAGCCGAGGTCGTGATTTTTCAC TTCGTGTGTCCCATTTTGTGTGCTTTGAGACAACGAGCGAATGGATTCGT AGCTATCACGGATACGATAATGGGGGAGGGGAGGGGAGGGTCTCTTCCTC CTCTGTCGTCCTGCGTTCATCAGGCCTCCCTCCGGGGGAGGGGAGCAGGC ATCGCCATCTGGTCCCGCACGTTGAAACAGCTGGCTAAATGTATGTACGC GAACATTCGTATTATGTGTCACGTCTTGCGACTGTCCAATACTTTTTTTT ATTTTTTCTCGGCTGGCAGGTGTTTTGTGGTGTTTACCTGTTGGCCCCGC GTACGCAGACGGATCACGGGAGGCGCGCCGGGGCGGGGGCCGGGGAAGAC GGGGTGGGGTCGGACGGGGAAGCGTCTGACCTAACGAGGATGCTCAGATT GGATGGTGAGGACAAGGGACGTGGACATGATCGCCCGATCGCAATCATTG GCAGTTGTTTACTGCTGTGGCTGTTTTGGTGTCAGGTTTGTGCGGTCGAC GGGGGGCTTGGCTGTCTGTTTGAGGCACGCCGCTTTTTCTGCTTTTTTGG CCAACATGCTATGGTTGCTTGCGGGGCAAGCGCATTTTTTTCCTTTTTGG TCTCCCCGTGGCAGGGTTTGTTTGCGGCATCAACGTCAGCACGGCTGCTT TTGTCGTGGCGTGTACCCTGGGTTGAGCTGCATTGCACGACGGGAGAGAG CTGCAGAGAGAGAGAGAGCGGGGGACGCACGTTTGTTTGTGTTGGTGTCG ACGGACGACCTTGTGGTTCATTTCTTTCGGGCCACAGCGGCGACGGGGCC AGCGGCGACGGTCACGCGAACGGCACGGCAGTTCATCTTTTGTTCGTGTC GCGTCCTGTGTCACGCCAACGGCGGCTACTTTGCGGTGTCTTGCTTTTCT TTTTTTCCGTTGTGTCCCCAAGTGCCGTGCTGCATGCAAATCAACCACAA GTGACGGTTTTGGGTCCGTCCGCCTTTTGATTCTTGGAAACGTCTTTTTG TTGCCTCCCTGCAGATGAATCGCCGGCACCATCCCCCGTGTACGCGGGCT CGAATGGTTGCTTGTCTCCGGGACGGTCGATGGACACGAGTATGGAGGCG GGCGACGAGGAGATCGACTGGGATCACACGAGAATGCTAAGTCTAGGCTT CTTCCCGAGTATCTCGACCGACCAGGTTCGTGTTTAGAATGTTGTTGTCG TTGTTGTTGTTGTTGTTGTTGTTGCTTCGACCAGTTCCAATCTTTGCTCA GCAGCACCAGCAGTGATCCAACTGACGGTGACGCCTTTCTGAACAAGAAG GCTAAAAAGATGCCCACGGAACAAGGCATGGAGAAAGTTGAAAGACCAAG AACTGATTACCCCGAAAACTATCTCAATGCTGCCGCAATTTCGCAACGTG ACGTCGGAGGAATATCGTAAGAGCAGTGGGGAGAAGGTGATGTCAGTCGT CAAACACAGCAAGCCCTGTGTTGCCATGCGTGTGAGGCTGTTGTCGACAG CCGCCGGTACCCATGCAGCAATCGCGCGCCTCAGCGTGACCACCTGAGAG ACAGAGAGAGAGAGGAAAGTTTTGGCGTCTGTTTTGTTTATTTCGCCGTT CGTTCTTGTGTTACGCCAGGACGTGGCCAAGATGGGGATGGGCAAGCTGA CCAACAACTTCGAGGGGATCCACGACGGAGAGGCTAGGGATTCCCACGGC CATGCCGGCGGCAGTGCGAGGGTCACAGATGCCGCACATAGACAAAGGTA TATATTTGCTGGAGTATTGGTGAAGAGGGCCGTTCTGCTCCGCGTTGTTC GTTCAGGCCGTGCCATGCGCTCGGAGCTTGTAGAGCGTCGGTTGTGTTCT CTCTCGGTCTCTGGCTCCTGATGCGAGTATGAACGAGCCACGCGAAAGTC TCTATGTGCAGGTGGTTTGCCGGCGGAAGAAAATAAAATAACGAAATATG ACTTGTCGTTGTTTCTTGTTGTCCCCACTCACATACGAGGCACGGCAGTC GATCACGACGGATGGATGTATAGAGATCGAGCGATTTAACCACGAACCCC GACGCCCGTCCTGCCCGCCCTTTACGCACACGCTGCCGCTTGGACCCCAG CACCCTGCTGCCGCCGCCGTGGTCGAAACCGAAGGACACACCTCCGCGGC CCAACTCGCCGAGCAACAACATCAGCGGCAGAGCGGCCCCGTCTCCCTTG GGCGCCGCGGCCACCGCCGCGGACCAGCAGGTCGGGGGCACAGACGTGGA TATTGAGGGGGGTGGGAACAGGGACAGGGACGGGGACACGGAGCGTCGAA GACGACGGGCAGGTGGGGCAGCATAGGCGGCGGGAGCATCAGCCTAATAA TGCGGTCACCGGCTTGTCCTCGAATCTTGCGCCGCGACGATATGACGAAT CGCCGACGGTGGGGGTGGGGATAAGGGAGGCTCCATAACTTCTCTTGGTG CGGGTGGGCGCGTTTGTGTGTACAGGGCTCTCCGTGCAGGATTTTTCTTG GCGGGCCAGGCCGGGCGTGCATGGGTAGGGTTGTTGTTGCTGTTGTTGTT GTTGTCATCGTCATCGTTTTTGTTGTTTGCGTGAGGCTGTGTGGAGATCA AGGGCGGTTACACTGCCTGGATTTGATTTCGAAACTTGGCATCGGTGTTA AAGTCTGAGCCTTGACCTTCATGCGTGCTGCTCTTGTGGCCCGTGGTTTT GCGGCAGCTTTCCCCCTAAATGCGCGGTCGATGTTAATTTTCGCTCTTTT ACGGTGCGATTTGCTTCGAGTCGATCGATGTTCCTCGAGTAGGTAGAAGT TTTATTGATACATTTTCAAGTTGCATGTTGCCGCAGGTGTAAGGTCAGCG ACGCGCAATGTGTATATCGCATCACTTGTGGACACAGGAGTGCTCCACAG GCCTCTGTTGTGGCGGAGGATGTACGTGGGGGATGCGAGCGAGCGGTAAG CACAGCTGTTTTTCGGGGGCTCTGGGCCACACGTTGCGTTCACCCCGTGT TGGTATTCGAGGGATGAACCGCGTTGATGTGTCTCGTCCGGAATATTACT CGGCTGTTGTTTTCCTTGGTCTCCGTTTTGGTTTGTCTGCGAGCCCTGCC TCCGCTTGTTAATTCACTTATGAAGTTGTTTCCCTATTTAGAGGATAGTT TTAGGGGGCTAGGTTTGGTGACGTTTTTACCAAGAACAAATGAAGATACG TATGTACCTCGTGTGATGCAAATGCGTGTACAATGTAGGGTGCGAAGGGG GAATCGTTTCGTGCATCAGTCACCCTGATCATGATGATGGTGGTCAAATC GAGTCTGTATTTGAAGTTTGAATTTTCCTCTAGCTTGGTTGTATGGTACG CACGTACAACATCCAATGTCGTTACCTTTCAAACCGATGTACATGCGCGA GTCAGGG
back to top

Coding sequence (CDS) from alignment at S-firma_M_contig921:604..7860+

>mRNA_S-firma_M_contig921.20158.1 ID=mRNA_S-firma_M_contig921.20158.1|Name=mRNA_S-firma_M_contig921.20158.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=4566bp|location=Sequence derived from alignment at S-firma_M_contig921:604..7860+ (Sphaerotrichia firma Sfir_13m male)
ATGGTGCAGAAATGGGCTATCGGCGCGATGATCAACATCTCGGGTTCCAT
CGCCATCAACTTGGGCACCAACCTCATGAAGCTATCACATAAGATGGTGC
AGAAATGGGCTATCGGCGCGATGATCAACATCTCGGGTTCCATCGCCATC
AACTTGGGCACCAACCTCATGAAGCTATCACATAAGATGGAGAAAGGGGA
GGCGCCGCCCCAGCCGACCGACGGCGACAAGCACGCCTCCTTTCGGACGA
CGGCACAGAAACAGAAACCCTCGGCCACCATGTCCTCGGACGACCTAGAA
GCCGCCGAGTCGATGCTCATCAACCCCAGTTCCGCCGCCAACCCCGCCCG
GCGCCAGCAGCCACAGCAATTCCCTTCCTCCAAAGGCAAGGGCAAGGGCA
AAGGCATGGGCAACATCACCCGGACGCACGGGGTAGAGATGACCACCTAC
TCTGCGGTCTCGGTTTCGGAAGACGCGGAACCCGACGTCCAACACGCTGC
GGGTTCGGAACCGGCAAGAACAGCAACAGGAGCAGGCACTAGTAAGGGTA
GGGATTTTGTTGCAGGCGGAGGCGGCGGCGGCGGCGGGAGAGGGGGCGCG
GGGGTCTACGAGGAGGAGACGGTGGGGCTCACGGAGGAATCACTGACGGA
CTCGCCTTCCTCCGCGGCGGGGGTGAGTACGAACTCGGACGACCACCACC
GGGCGGGGCTGCTGCTAGGAAAGTCACAACCAAGAGGAGGCCGCAGAAAA
AGCTTGACGTCGTCTTCTTCGCCTTTTTCCAACGGGACCGGCAGCAGCAA
GGCGAACGGCCACGCCAAGGAGCCCGGAGCCAGGAGGGAGTACGACGAGC
ACAACCCTGGCGTGAGAAGGAGGGCCCTGAGCAGCCCTAGCAGCCCCCAC
CAGGATTTGCTCGCGAGCTGCAGCAGCACCTGCAGCGGCGAGGAGAGCTA
TTCTGGTAGAGGGGGGGGGGACCAGCAGTTCGAGTGGAAGACGAAGGCGC
TGTGGTACCTGGGCGCGGTCCTGCTGGTCGGGGGCAGCCTGGTGAACTTC
GCGTCGTTCGGGTTCGCGCCGCAGAGCCTGCTGGCCAGCCTCGGGTCGGT
GCAGTTCATCTCGAACGTGGTGTTCGGGAAGGTGATTTTGAGGGAGATCG
TCACGAGGAGGATCATCGTCGGGACCGCGACCATCATCCTGGGGAACACG
CTCACGCTCTGCTTCAGCCCTCATCAGATGGAGAAAGGGGAGGCGCCGCC
CCAGCCGACCGACGGCGACAAGCACGCCTCCTTTCGGACGACGGCACAGA
AACAGAAACCCTCGGCCACCATGTCCTCGGACGACCTAGAAGCCGCCGAG
TCGATGCTCATCAACCCCAGTTCCGCCGCCAACCCCGCCCGGCGCCAGCA
GCCACAGCAATTCCCTTCCTCCAAAGGCAAGGGCAAGGGCAAAGGCATGG
GCAACATCACCCGGACGCACGGGGTAGAGATGACCACCTACTCTGCGGTC
TCGGTTTCGGAAGACGCGGAACCCGACGTCCAACACGCTGCGGGTTCGGA
ACCGGCAAGAACAGCAACAGGAGCAGGCACTAGTAAGGGTAGGGATTTTG
TTGCAGGCGGAGGCGGCGGCGGCGGCGGGAGAGGGGGCGCGGGGGTCTAC
GAGGAGGAGACGGTGGGGCTCACGGAGGAATCACTGACGGACTCGCCTTC
CTCCGCGGCGGGGGTGAGTACGAACTCGGACGACCACCACCGGGCGGGGC
TGCTGCTAGGAAAGTCACAACCAAGAGGAGGCCGCAGAAAAAGCTTGACG
TCGTCTTCTTCGCCTTTTTCCAACGGGACCGGCAGCAGCAAGGCGAACGG
CCACGCCAAGGAGCCCGGAGCCAGGAGGGAGTACGACGAGCACAACCCTG
GCGTGAGAAGGAGGGCCCTGAGCAGCCCTAGCAGCCCCCACCAGGATTTG
CTCGCGAGCTGCAGCAGCACCTGCAGCGGCGAGGAGAGCTATTCTGGTAG
AGGGGGGGGGGACCAGCAGTTCGAGTGGAAGACGAAGGCGCTGTGGTACC
TGGGCGCGGTCCTGCTGGTCGGGGGCAGCCTGGTGAACTTCGCGTCGTTC
GGGTTCGCGCCGCAGAGCCTGCTGGCCAGCCTCGGGTCGGTGCAGTTCAT
CTCGAACGTGGTGTTCGGGAAGGTGATTTTGAGGGAGATCGTCACGAGGA
GGATCATCGTCGGGACCGCGACCATCATCCTGGGGAACACGCTCACGCTC
TGCTTCAGCCCTCATCAGGACGACAATTTCAGCACCCACCAGCTTAAGGC
CTTCTACGACCTGGAGTACAACACGCTCCTGTGCCTCGAGCTGGCCTCCG
CGCTCGCGATGCACGCAACCTACAAGAGCTTCAAGAGGAGCAAGGAGCAG
GGGAAGCCGAGGCGCTACTCCGACCTGGTCATGCCCCTGGCCTACGCCAT
CTGCTCGGCCATCATCGGCACGCAGAGCGTCGTGAACGCCAAGTGCCTGA
GCGAGCTGCTGACGTTGACGTTCCAGGGTGAAAATCAGATGGACGACAAT
TTCAGCACCCACCAGCTTAAGGCCTTCTACGACCTGGAGTACAACACGCT
CCTGTGCCTCGAGCTGGCCTCCGCGCTCGCGATGCACGCAACCTACAAGA
GCTTCAAGAGGAGCAAGGAGCAGGGGAAGCCGAGGCGCTACTCCGACCTG
GTCATGCCCCTGGCCTACGCCATCTGCTCGGCCATCATCGGCACGCAGAG
CGTCGTGAACGCCAAGTGCCTGAGCGAGCTGCTGACGTTGACGTTCCAGG
GTGAAAATCAGATGGGGTCGCCGTTCACCTACCTGGTGATGGCCATCTGG
CTCGGCACGACAATATTTTGGTTGGTCCGGATGAACCGCGCCCTGGCGAT
GTTCCACGGGCTTTTCATCATTCCGGCCTTGCAGGGGTCGCCGTTCACCT
ACCTGGTGATGGCCATCTGGCTCGGCACGACAATATTTTGGTTGGTCCGG
ATGAACCGCGCCCTGGCGATGTTCCACGGGCTTTTCATCATTCCGGCCTT
GCAGGTGTTCTGGACGTTTTTCTCCGTGATCGGTGGCGGCTTCTACTTCG
AGGAGTTCCACACGCTGCACGTTCTAGGAGGCTTGGGGTTCGCTGTGGGG
GTGTTGGTGGTGTTCTGGACGTTTTTCTCCGTGATCGGTGGCGGCTTCTA
CTTCGAGGAGTTCCACACGCTGCACGTTCTAGGAGGCTTGGGGTTCGCTG
TGGGGGTGTTGGTGGTGTTTTGTGGTGTTTACCTGTTGGCCCCGCGTACG
CAGACGGATCACGGGAGGCGCGCCGGGGCGGGGGCCGGGGAAGACGGGGT
GGGGTCGGACGGGGAAGCGTCTGACCTAACGAGGATGCTCAGATTGGATG
GTGTTTTGTGGTGTTTACCTGTTGGCCCCGCGTACGCAGACGGATCACGG
GAGGCGCGCCGGGGCGGGGGCCGGGGAAGACGGGGTGGGGTCGGACGGGG
AAGCGTCTGACCTAACGAGGATGCTCAGATTGGATGATGAATCGCCGGCA
CCATCCCCCGTGTACGCGGGCTCGAATGGTTGCTTGTCTCCGGGACGGTC
GATGGACACGAGTATGGAGGCGGGCGACGAGGAGATCGACTGGGATCACA
CGAGAATGCTAAGTCTAGGCTTCTTCCCGAGTATCTCGACCGACCAGATG
AATCGCCGGCACCATCCCCCGTGTACGCGGGCTCGAATGGTTGCTTGTCT
CCGGGACGGTCGATGGACACGAGTATGGAGGCGGGCGACGAGGAGATCGA
CTGGGATCACACGAGAATGCTAAGTCTAGGCTTCTTCCCGAGTATCTCGA
CCGACCAGGACGTGGCCAAGATGGGGATGGGCAAGCTGACCAACAACTTC
GAGGGGATCCACGACGGAGAGGCTAGGGATTCCCACGGCCATGCCGGCGG
CAGTGCGAGGGTCACAGATGCCGCACATAGACAAAGGACGTGGCCAAGAT
GGGGATGGGCAAGCTGACCAACAACTTCGAGGGGATCCACGACGGAGAGG
CTAGGGATTCCCACGGCCATGCCGGCGGCAGTGCGAGGGTCACAGATGCC
GCACATAGACAAAGCACCCTGCTGCCGCCGCCGTGGTCGAAACCGAAGGA
CACACCTCCGCGGCCCAACTCGCCGAGCAACAACATCAGCGGCAGAGCGG
CCCCGTCTCCCTTGGGCGCCGCGGCCACCGCCGCGGACCAGCAGGTCGGG
GGCACAGACGTGGATATTGAGGGGGGTGGGAACAGGGACAGGGACGGGGA
CACGGAGCGTCGAAGACGACGGGCAGGTGGGGCAGCATAGCACCCTGCTG
CCGCCGCCGTGGTCGAAACCGAAGGACACACCTCCGCGGCCCAACTCGCC
GAGCAACAACATCAGCGGCAGAGCGGCCCCGTCTCCCTTGGGCGCCGCGG
CCACCGCCGCGGACCAGCAGGTCGGGGGCACAGACGTGGATATTGAGGGG
GGTGGGAACAGGGACAGGGACGGGGACACGGAGCGTCGAAGACGACGGGC
AGGTGGGGCAGCATAG
back to top