prot_S-firma_M_contig9.19909.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9.19909.1
Unique Nameprot_S-firma_M_contig9.19909.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length154
Homology
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BLAST of mRNA_S-firma_M_contig9.19909.1 vs. uniprot
Match: B5LWH5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWH5_9PHYC)

HSP 1 Score: 104 bits (260), Expect = 1.340e-25
Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 0 
Query:    4 VSCGRIVHKNTSNVALGLQVSKASYVHDALTDLSTEISREEVVMDPTGDSASMSLGVLHESGGVKTIQPVITTTPAATTV-TSLDSDSVYNLTLDGSISWDTDDASLYLSSNKAFRFRYVESDGISPSRLVLEGLDEDTG--VYLPKVEFSTD 153
            +SCG +VH    N+     +  +S+ +D  +  + E+SR++V++D +  S S    V  ++    T+QPV+ +  + + V +S D++    LTLDG ISWD+  A LYLS++K FRFR+ ESDG++PSRL+LE L  + G   YLPK EF+++
Sbjct:   20 MSCGDVVHGEVVNIG---DLVCSSFSYDEESGEAREVSRDDVIVDSSSGSVSFRSSVRSKNS---TMQPVLISASSQSCVKSSTDNELFTTLTLDGGISWDSSTACLYLSADKLFRFRFAESDGVNPSRLILEALGSENGGGTYLPKAEFTSE 166
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9.19909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
B5LWH5_9PHYC1.340e-2539.22Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9contigS-firma_M_contig9:4259..4720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9.19909.1mRNA_S-firma_M_contig9.19909.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9 4259..4720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9.19909.1 ID=prot_S-firma_M_contig9.19909.1|Name=mRNA_S-firma_M_contig9.19909.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=154bp
MTSVSCGRIVHKNTSNVALGLQVSKASYVHDALTDLSTEISREEVVMDPT
GDSASMSLGVLHESGGVKTIQPVITTTPAATTVTSLDSDSVYNLTLDGSI
SWDTDDASLYLSSNKAFRFRYVESDGISPSRLVLEGLDEDTGVYLPKVEF
STD*
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