prot_S-firma_F_contig1029.427.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1029.427.1
Unique Nameprot_S-firma_F_contig1029.427.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length309
Homology
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 3.100e-116
Identity = 190/301 (63.12%), Postives = 219/301 (72.76%), Query Frame = 0
Query:   13 PCLHSS----HALAVSWCHR--PPGIRCPRQQQQTQRRRPRWLPVIQAEQQDELGDGMELIKPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITEPYDKKEMGKPKVVPWKKPEKENDFFYVEEGAGQAPGNDPVMLLVAVVGILGLSYVFL 307
            P  H S    HA A +W  R  PP  R             R +P   ++ +   G GME  +P+LE+SLDAIDDV+MDRLPGEGR+KVK+FGAWLDAD+AGRKAGQGN+AAGLIAR   GEEL            + ++IFYEEAI++MRRR+CD +VALL+KAV LAG DSRRGGEFKLWAAQALQ   RN QAV VLKSLK HRD DVRKV AELLYIAQAP+LALN  DFV+FPD S IT+ YDKK++GKPK+ PWKK EKE D FYV E  G  PGNDPVM L A+VGILGLSY+FL
Sbjct:   13 PAFHQSNLQVHAAAAAWTRRRVPPTRR-------------RVVPAFMSDPRQGEG-GMEFTEPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQ---------EKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFPDTSGITDDYDKKDLGKPKIAPWKKSEKEEDMFYVGEDTGVRPGNDPVMFLAAIVGILGLSYMFL 290          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.020e-47
Identity = 113/240 (47.08%), Postives = 141/240 (58.75%), Query Frame = 0
Query:   70 TLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPD--VSRITEPYDK---KEMGKPKVVPWKKPEK-ENDFFYVEEGAGQAPGNDPVMLLVAVVGILGLS 303
            TLE+  D +DD+ MDR   +GRD+VK++GAWLDADIAGR  G  NKAA L A+A  GE L         +  +  ++FYEEAI  M + E D A  LL +AVA  GEDSRRGGEFKLW AQALQ    N  AV +L+S++ H D DVR V  ELLYIA APKL L   D V F     + I + +D    +E+ +   VP+K  +  E    YV       P  +P  L VAV  ILG+S
Sbjct:   54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEAL---------TDREKGEVFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVRTVAKELLYIATAPKLDLEAADLVTFGAGLTAGIDDAFDASRYRELKRGPKVPYKDGQLLEKKPAYVVREYQPPPEANPAFLAVAVAVILGVS 284          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK)

HSP 1 Score: 160 bits (405), Expect = 1.700e-43
Identity = 96/192 (50.00%), Postives = 126/192 (65.62%), Query Frame = 0
Query:   65 ELIKPT-LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITEPYDKK 255
            +L KP  LE+ LD IDD+ M R   E RD+VKV+GAWLDADIAGRKAG   K   + A+   GE LAP          +  +IF+EEA+  M R     +VAL+E+AV  AG +S RGG F+LW AQA+   GR + A   LK+L  H D ++R+V AELLYI +AP++ L ++DFVEFPD+S ITE +D+K
Sbjct:   75 DLSKPMDLEKELDLIDDITMGRSEME-RDQVKVYGAWLDADIAGRKAGDNRK---IKAKLASGERLAPE---------ERGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDMSTITEKFDRK 253          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 9.350e-43
Identity = 100/235 (42.55%), Postives = 139/235 (59.15%), Query Frame = 0
Query:   75 LDAIDDVYMDRLPGEGRD-KVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITEPYDKKEMGK-PKVV---PWKKPEKENDFFYVEEGAGQAPGNDPVMLLVAVVGILGLSY 304
            LD IDD+ M+R P +  D +V+V+GAWLD+DIAGRK     K   L ++ ++GE+L            + ++IF+EEA+  M   + D +V L+++AV  AG DSRRGG+F+LW AQ L   G+   A+ +L+ LK HRD DVR V AE+LYI +AP++ L + DFVEFPD S I E Y +    K PK+     WK+PEKE    YV    G  P  D     +A+     L+Y
Sbjct:   86 LDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVASKTKE--LRSKMNKGEQL---------EDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDEKYAETVWTKGPKIQVARKWKEPEKEE---YVIRSHGPPPKFDLTFGAIALALFAALTY 306          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.020e-30
Identity = 89/245 (36.33%), Postives = 134/245 (54.69%), Query Frame = 0
Query:   71 LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAG-EDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITEPYDKKEM-------GKPKVVPWKKPEKENDFFYVEEGAGQAPGN-DPVMLLVAVVGILGLSYVF 306
            +E+ +D IDD+ M+R    GRDKVK++G WLDAD+ GRKAG+ N+AA L    D         D T      +++  +   ++ M+  E   A  L  +AV L G   SRRGGE  LW AQA+   G    A+ +LK L+ H D  V KV  E+ YI +APKL ++ ++ V+ PD+SR+ +   K++M       G P V  +KKP K++   +V+E   + P   DPV   + +   +G  ++F
Sbjct:   13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFLTDEVD---------DDT------MAERIFSVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQHMDSSVGKVAGEIRYIFEAPKLEMDPDNMVKIPDLSRLDDWDSKRDMRFATQTTGGP-VREFKKPPKKHSLEWVKEQRNEPPAEIDPVQFCLLLSLAVGSIFLF 240          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR)

HSP 1 Score: 101 bits (252), Expect = 2.460e-21
Identity = 65/191 (34.03%), Postives = 98/191 (51.31%), Query Frame = 0
Query:   59 ELGDGMELIKPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQG----NKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDV 245
            E GD    +  +L   +D +DD+  DR P     +VK+FGAWLD  +AGRKA +     +KA     +AD   +      V+     + S   + + +++  +     + AL  +A  + G  SR GG+++LW AQ+L  AG  + A  +L+SL+ H D DVRKV  EL +I  AP L L    F E P +
Sbjct:   43 ENGDEEASMTASLPDDIDQMDDILFDRAPNNVN-QVKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSI 232          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A7S0TAG8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.710e-21
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 0
Query:   89 EGRDKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFV 240
            E   +V++FGA LDA +AG +A   +++A L   AD  E+ A       +S  + ++IFY EA+  M R + D AV LL +A + A   SRRGG+ +LW AQAL  A R  Q V +L  L  H D DVR V  EL++I +AP L LN + ++
Sbjct:   61 ENEKQVRMFGAKLDASMAGVRAV--SRSAILAVLADEEEDSAG------VSTEQKAEIFYAEAVERMNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYM 204          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A7J7ICZ3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICZ3_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 9.900e-17
Identity = 65/177 (36.72%), Postives = 90/177 (50.85%), Query Frame = 0
Query:   92 DKVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITEPYDKKEMGKPKVVP-WKK 267
            D+ +VFGAWLD  +   +  QG       AR   G            S  K ++  + + +  +   +   A  L+ +A ALAG  +R GGE+ LW AQAL   G+N +A  VL+ L  HRD DVR+V   LLYI QAP+L L    FV+  DV  I +P      G+ + +P WKK
Sbjct:  127 DRSRVFGAWLDNQVLEFERIQG------AARQHPGR-----------SRQKQAENAFAQGVQELNAGQYAKATDLIFRASALAGHQTRLGGEYLLWLAQALDAQGKNTRAQEVLRRLHYHRDNDVRRVAENLLYILQAPRLRLGPESFVQI-DVEAICDP------GRARDIPGWKK 279          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: A0A7S1DL49_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DL49_HEMAN)

HSP 1 Score: 82.8 bits (203), Expect = 3.370e-14
Identity = 59/161 (36.65%), Postives = 80/161 (49.69%), Query Frame = 0
Query:   93 KVKVFGAWLDADIAGRKAGQGNKAAGLIARA---------DRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALA--GEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEF 242
            KVKVFG W+D ++AGR  G   K    + RA         +    LA  + V  I   +  Q  ++     MR  +   AV+    AVA    G  SR GG + +W AQAL   G   +A+ +LK+  GH D DVR+V   L +I  APKL L+EN+F  F
Sbjct:  153 KVKVFGGWVDTEVAGRD-GFKKKEDRKVERALMDKYMKNTNGNATLATELVVQHIRKLQEGQRCFDTGTRAMRAGQYKAAVSAFVAAVAAVPEGRASREGGFYSIWLAQALDAKGEKYEAIKMLKAAMGHSDRDVRRVAEGLEFIMMAPKLELDENNFAWF 312          
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Match: R1EFV5_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EFV5_EMIHU)

HSP 1 Score: 79.7 bits (195), Expect = 1.490e-13
Identity = 56/150 (37.33%), Postives = 77/150 (51.33%), Query Frame = 0
Query:   93 KVKVFGAWLDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEEAISVMRRRECDNAVALLEKAVALA--GEDSRRGGEFKLWAAQALQEAGRNKQAVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFV 240
            K  VFGA LD  +AG           LI     G   AP        H +I    +   +  M+     +AV    +AVA A  G   R GG++ +W AQALQ AGR K+AVG+L++ + H D DVRK+   +LY+ +AP+L L E +FV
Sbjct:  119 KANVFGARLDPKVAGET---------LI-----GVNAAPEEP-----HEEI----FAAGVKAMKGGYYKDAVRYFTQAVAAAPGGLTGREGGQYSVWLAQALQAAGRTKEAVGLLQTCESHPDSDVRKISESVLYVLRAPELKLGEENFV 245          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1029.427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FPX2_ECTSI3.100e-11663.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHV4_9STRA1.020e-4747.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1UNI6_HETAK1.700e-4350.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V7T9_9STRA9.350e-4342.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BT75_9STRA4.020e-3036.33Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A2V3J3V9_9FLOR2.460e-2134.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0TAG8_9STRA4.710e-2141.45Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A7J7ICZ3_9RHOD9.900e-1736.72Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S1DL49_HEMAN3.370e-1436.65Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
R1EFV5_EMIHU1.490e-1337.33Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36761FAMILY NOT NAMEDcoord: 161..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 308..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availableTMHMMTMhelixcoord: 290..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1029contigS-firma_F_contig1029:16186..18796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1029.427.1mRNA_S-firma_F_contig1029.427.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1029 16066..19767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1029.427.1 ID=prot_S-firma_F_contig1029.427.1|Name=mRNA_S-firma_F_contig1029.427.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=309bp
MLSAVPAFLVQSPCLHSSHALAVSWCHRPPGIRCPRQQQQTQRRRPRWLP
VIQAEQQDELGDGMELIKPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAW
LDADIAGRKAGQGNKAAGLIARADRGEELAPPIDVTCISHGKISQIFYEE
AISVMRRRECDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQ
AVGVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNENDFVEFPDVSRITE
PYDKKEMGKPKVVPWKKPEKENDFFYVEEGAGQAPGNDPVMLLVAVVGIL
GLSYVFLG*
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