mRNA_S-firma_F_contig11085.1440.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig11085.1440.1
Unique NamemRNA_S-firma_F_contig11085.1440.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A3M6VFA8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFA8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.250e-46
Identity = 114/315 (36.19%), Postives = 165/315 (52.38%), Query Frame = 1
Query:  280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSL----GASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSA----HKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+   G L      G  RG     P++ V A  D   VLG   D K  +W   T RV  T+TGH GK+   +  P   H + ++ S+DRS+++WDV RG  ++TI+  S  N +    GA+A      + HQ         R  + + E +  HT   TS +F         +LT SRD+ LRV D  T      L ++ +   ++WS A+ SPD  +A  G ASG + VWN ++ +LE  L +    H  A++C  W  DG+ +A+CD  G + L++
Sbjct:  225 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAGALSSPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVLPHEV-ITGSSDRSLRVWDVMRGVRLQTISCVSSCNDIAAPSGANATFVQFASAHQDGAVRFWDTRTRRCVQELQGVHTEQTTSVSFG-----GNELLTNSRDHSLRVIDPRTYGVLRELRHKDYQCGFDWSQASLSPDGLYALAGGASGILFVWNARTGKLEKQLKSGPTGHYGAIACCVWRPDGQGVATCDKNGVVVLWE 533          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A833S375_PHYIN (WD domain G-beta repeat n=14 Tax=Phytophthora TaxID=4783 RepID=A0A833S375_PHYIN)

HSP 1 Score: 176 bits (445), Expect = 1.460e-46
Identity = 134/414 (32.37%), Postives = 203/414 (49.03%), Query Frame = 1
Query:    1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAELERKLAVAEAGRGKPARRAGAGAATDD------LRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA--SADGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATL----SAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            +LAR R LL+  EAE +++R  N   + R + +K          NAL+ E  +  +  ++G   PA  A A     +      L +  G        + T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+     L      G  RG     P++ V A  D   +LG   D K  +W   T RV  T+TGH GK+   +  P   H + ++ S+DRS+++WDV RG  ++T++  S  N + A   AD   +   + HQ         R  + + E R  HT   TS +F         +LT SRD+ L+V D  T      L ++ +   ++W  A+ SPD  +A  G ASG + +W+ ++ +LE  L    + H  AV+C  W  DG+ +ASCD  G + L++
Sbjct:  108 ELARQRALLEGSEAEGSRLRKRN-AELERQVQEK----------NALLHEWIQSNSGEKSGEPSPALVAMATQEAAESLTHLLLNEEEGLSKEGVAKLVTHVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAASLSPPRALGEYRGVGTAHPLLCVRASEDGALILGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVTPHEV-ITGSSDRSLRVWDVVRGVRLQTVSCVSSCNDIAAPSGADSGFVQFASAHQDGAVRFWDTRTRRCVQELRGLHTEQTTSVSFG-----GSELLTNSRDHTLKVIDPRTYGVLRELHHKDYQCGFDWGQASLSPDGRYALAGGASGVLFIWSARTGKLERQLKPGPTGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 504          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A484EA28_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA28_BRELC)

HSP 1 Score: 175 bits (443), Expect = 5.620e-46
Identity = 142/422 (33.65%), Postives = 206/422 (48.82%), Query Frame = 1
Query:    1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAE-LERKLAVAEAGR--GKPARRAGAGAATDDLR----------DLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA--SADGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSA-----HKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            +LARHR LL+  EAE +++R  N    +++L+            NAL+ E LE     A +G   GK    A    AT +            D  GT  + S  V T  THSIRAH TEVN  C N SG ++++ SSDGT R W+     L      G  RG     P++ V A  D   VLG   D K  +W   T RV  T+TGH GK+   +  P   H + ++ S+DRS+++W+V RG  V+TI+  S  N + A   A G+ +   + HQ         R  + + E R  HT   TS +F         +LT SRD+ L+V D  T      L +  +   ++W+ A+ SPD+ +A  G  SG + +WN ++ +LE  L +     H  AV+C  W  DG+ +ASCD  G + L++
Sbjct:  146 ELARHRALLEQSEAEGSRLRRRNTELETQVLEK-----------NALLHEWLE-----ANSGENIGKSPSPALVAMATQEAAERMSHLTLNGDDGGTAHSPSKLV-TLATHSIRAHATEVNCVCFNTSGKILFSGSSDGTVRAWEAEAASLSLPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVAPHEV-ITGSSDRSLRVWNVVRGARVQTISCVSSCNDIAAPSGASGAFVQFASAHQDGGVRFWDTRTRRCVHELRNLHTEQTTSVSFG-----GTYLLTNSRDHSLKVIDPRTYGVLRELRHLDYHCGFDWAQASLSPDSRYALAGGVSGALFIWNVRTGKLEKQLKSVNSMGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 544          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A225VRZ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRZ7_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.060e-46
Identity = 109/315 (34.60%), Postives = 159/315 (50.48%), Query Frame = 1
Query:  280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAK--GDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA----SADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATL----SAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+     L      G  RG     P++ V     G  VLG   D K  +W   T RV  T+TGH GK+   +  P   H + V+ S+DRS+++WDV RG  ++T++  S  N + A     A      + HQ         R  + + E    HT   TS +F         +LT SRD+ L+V D  T      L ++ +   ++W  A+ SPD  +A  G ASG + +WN ++ +L+  L    + H  AV+C  W  DG+ +ASCD  G + L++
Sbjct:   32 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAASLTPPRALGEYRGVGTAHPLLCVRTSEDGSLVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVMPHEV-VTGSSDRSLRVWDVMRGVRLQTVSCVSSCNDIAAPTGYDAGFVQFASAHQDGAVRFWDTRTRRCVQELHGLHTEQTTSVSFG-----GNSLLTNSRDHSLKVVDPRTYGVLRELRHKDYQCGFDWGQASLSPDGRYALAGGASGVLFIWNVRTGKLQKQLQPGSTGHHGAVACCVWRPDGQGVASCDKNGMVVLWE 340          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A0P1B442_PLAHL (WD40 repeat protein TipD n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B442_PLAHL)

HSP 1 Score: 169 bits (427), Expect = 1.080e-43
Identity = 112/315 (35.56%), Postives = 165/315 (52.38%), Query Frame = 1
Query:  280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASA--DGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLS----AHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+    +L      G  RG     P++ V A  D   VLG   D K  +W   T RV  T+TGH GK+   +  P   H + ++ S+DRS+++WD+ RG  ++T++  S  N + A +  D + +   + HQ         R  + + E    HT  +TS   SLG      +LT SRD+ L+V D  T      L ++ +   ++W  A+ SPD   A  G ASG + +WN  S ++E  L+    +H  AV+C  W  DG+  ASCD  G +AL++
Sbjct:  236 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAERSQLTPPRALGEYRGVGTAHPLLCVRASEDGGFVLGTGCDRKCFVWRVGTGRVSQTLTGHKGKVLAAEFSPVVPHQV-ITGSSDRSLRVWDIMRGVRLQTVSCVSSCNDIAAPSGTDAAFVQFASAHQDGAVRFWDTRVVRCVQELPCVHTEQITS--VSLG---GNNLLTNSRDHTLKVIDPRTYGVLRELKHKEYQCGFDWGKASISPDGRFALAGGASGCIFIWNVGSGKVETQLAPGPTSHYGAVACCVWRPDGQGAASCDKNGMVALWE 544          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A4D9D981_9STRA (ATG16 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D981_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.390e-43
Identity = 124/371 (33.42%), Postives = 176/371 (47.44%), Query Frame = 1
Query:    1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVA-----------ELERKLAVAEAGRGKPARRAGAGAATDDLRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAV-SCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLS 1077
            +L R R  L   E EC  +R +NE  V RM+ +K    +EMNRM  LV            E+E   AV  A + + A  +G    TD+L              P+  +   RAH  +VN     ++G  + TA  DG  R+W+  +G+LK TL G     ++ +  +GD V+GG +DH  +LW   + R+  T  GHSG IY  +L+     AV +   DR+I+LWDVGR  C + + S S  N L    DG   V+ HQ         R G     N T    A  +   S+  G     L  SRDN L++ D  T      L +E +    NWS A FSP + + A G+A+G++ VW T S E ++ LS
Sbjct:  176 ELKRVRARLDTVEKECLDVRRQNEELVRRMVGEKSHNAEEMNRMTELVERMRAQLKARNLEIESTQAVVAAVKIEAAPSSGL--RTDEL--------------PSHCSQQFRAHAADVNDLVYCETGQWLATAGGDGKVRVWEAESGRLKATLHG--QDVMLGLDFRGDFVVGGSSDHTCKLWSLASGRLHRTFVGHSGNIYAVKLIAGDLRAVLTGGADRTIRLWDVGRASCRQVLRSGSTCNGLDIGLDGHAPVSAHQDGGLRFWDLRAG-----NPTMIVRAFETQATSVQYGQNFTALANSRDNALKIIDTRTFETLHVLRHEDYRTFLNWSRACFSPSSSYVAAGSATGQLFVWETASGETKSILS 523          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A7S2XSX3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSX3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.940e-43
Identity = 100/305 (32.79%), Postives = 158/305 (51.80%), Query Frame = 1
Query:  274 VPTSVTHSIRAHTTEVNACCMNDSGA-LVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAVSCSTDRSIKLWDVGRG--HCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAAS-GEVLVWNTKSHELEATLSAHKAAVSCTAWSLDG---RHMASCDGEGFLALY 1167
            +PT   H I+AH++EV +   +  G+ LV T+S+D T R+WD  +G ++ TLRG +   +M     G  V+G  +D   R+W  +T+R+   + GH  K+   +L+      ++ S DRSIKLWD+ R       T+  +S  N L  S D   +V+GH          R G++ AE  T HT  VT +      G    ILT  RD++L++ D       + ++++ F   +NWS  ++SPD  +AA G+ + G++++W   S E    LS H+A V   AW   G   + +AS D  G L L+
Sbjct:   76 IPTEAKHVIQAHSSEVTSVRYDGVGSDLVATSSNDSTVRVWDTSSGAMRATLRGGSGHAMMGCDIVGGLVVGCASDKSCRVWKLSTQRMIHQLVGHGNKVTCARLISGGKEVLTASADRSIKLWDISRNTYRQTTTLRHSSTANCLDVSYDTKTVVSGHMDGGVRFWDIRSGEKTAEIETLHTGGVTCAHLHPTNGTQ--ILTNGRDSVLKLVDIRMGSVISTMTHKDFRTPFNWSACSYSPDGVYAAAGSGTTGDIMIWRVDSGEFIKKLSTHRAGVGGFAWGKGGSCGQQVASVDTSGKLVLW 378          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: G4ZY83_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZY83_PHYSP)

HSP 1 Score: 162 bits (411), Expect = 1.890e-41
Identity = 109/311 (35.05%), Postives = 154/311 (49.52%), Query Frame = 1
Query:  280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSL----GASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
            T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+   G        G  RG     P++ V A  D   VLG   D K  +W   T RV  T+TGH GK+   +  P   H + ++ S+DRS+++WDV RG  ++T+   S  N +    GA A      + HQ         R  + + E R  HT   TS +F         +LT SRD+ LR+ D  T      L ++ +   ++WS A+ SPD  +A  G ASG           L+   + H  AV+C  W  DG+ +ASCD  G + L++
Sbjct:  247 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAGSASPPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVVPHEV-ITGSSDRSLRVWDVMRGVRLQTVGCVSSCNDIAAPTGADAGFVQFASAHQDGAVRFWDTRTRRCVQEMRGLHTEQATSVSFG-----GNELLTNSRDHSLRIIDPRTYGVLRELRHKDYQCGFDWSQASLSPDGRYALAGGASG-----------LKPGPTGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 540          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A024GCZ8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCZ8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.280e-38
Identity = 98/304 (32.24%), Postives = 157/304 (51.64%), Query Frame = 1
Query:  274 VPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTG-KLKGTLRGAADQ-PVMSVFAK--GDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEH-NLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEA-TLSAHKAAVSCTAWSLDGRHMASCDGEGFLALY 1167
            V + +T  +RAH TEVN+ C N S  ++++ASSDGT R WD+ +  +  G  RG     P++ V     G+ V+G  +D K  +W   T RV  T+TGH GK+       E     ++ S+DRS+++WD+ +G  + T++ TS  N L     G MIV+ HQ         R    + +  + HT AVTS +F+        ++T S+D+ L++ D  T        + ++   ++W+ A  + D    A G A G + +WN  + ELE    +   A+V+C  W  DG+ +A CD  GF+ L+
Sbjct:  214 VVSQLTKVVRAHATEVNSICFNASDKVLFSASSDGTIRAWDLASNFRSIGEYRGLGTAYPLLCVRVSKDGEFVVGTGSDRKSFVWRVGTARVFQTLTGHKGKVVAAAFSSESVREVITGSSDRSLRIWDIVKGSSIHTLSCTSSCNDL--EMTGGMIVSAHQDGSVRFWDRRTKLCVKQLESVHTEAVTSVSFTPS---GTHLVTNSKDHTLKLVDPRTYEIVRCFQHATYKCGFDWNKAAITQDGRLVAAGGALGSIHIWNAWTGELEQENQNQCPASVACCVWRADGQQLACCDKNGFVTLW 512          
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A6V2HHW2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HHW2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 5.200e-38
Identity = 129/387 (33.33%), Postives = 186/387 (48.06%), Query Frame = 1
Query:   67 NETYVSRMLDDKLKMVDEMNRMNALVAELE------RKLAVAEAGR-------GKPARRAGAGAATDDLRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGA-LVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAVSCSTDRSIKLWDVGRGHCVRTIA--STSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAAS-GEVLVWNTKSHELEATLSAHKAAVSCTAWSL---DGRHMASCDGEGFLALY 1167
            N   V R++ +K KMVDE+N+MN             R L   EA R       G      GAG  + D R       A+   +PT+  H I+AH  E  +   + +G  L+ T SSD T ++WD   G++K TLRG +  P++ V   G  V+G   D   R+W+  T+R+   + GHS K+   +LL      ++ S DRSIK+WD+ R    +T     +S  N +  S D   +     XXXXXXXX R G+R+ +  + H   VTS       G    ILT  RD++LRV D  T      L +E F   +N+S    SPD  +A  G+ + GEV VW     +++  L AH   V   AW     +G+ +A+ D  G L L+
Sbjct:  227 NAQLVERVVSEKEKMVDEINKMNXXXXXXXXXXXXLRTLHKQEAQRKEGLDLVGNQRSHIGAGGGSSDRR-----FGATGVFLPTTPKHVIQAHPIEATSVRYDGTGLDLIATGSSDSTVKVWDTNNGQVKATLRGGSGHPMLGVDLSGGLVVGCGADKTCRVWNIRTQRMIHQLAGHSTKVTCVRLLNNEKGVITGSADRSIKVWDISRSTYKQTTTFRHSSTSNCMDVSLDSLTVFXXXXXXXXXXXXVRSGKRVLDVLSMHEGGVTSVQCHPMNGNQ--ILTNGRDSVLRVVDVRTCTAVQSLGHEDFRTAFNYSSCGISPDGAYALAGSGTTGEVFVWGLTDGKVKKKLKAHNVGVGGVAWGRGGSNGQQVATVDRNGVLMLW 606          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M6VFA8_9STRA1.250e-4636.19Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A833S375_PHYIN1.460e-4632.37WD domain G-beta repeat n=14 Tax=Phytophthora TaxI... [more]
A0A484EA28_BRELC5.620e-4633.65Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225VRZ7_9STRA9.060e-4634.60Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A0P1B442_PLAHL1.080e-4335.56WD40 repeat protein TipD n=1 Tax=Plasmopara halste... [more]
A0A4D9D981_9STRA2.390e-4333.42ATG16 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A7S2XSX3_9STRA6.940e-4332.79Hypothetical protein n=1 Tax=Attheya septentrional... [more]
G4ZY83_PHYSP1.890e-4135.05Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A024GCZ8_9STRA2.280e-3832.24Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6V2HHW2_9STRA5.200e-3833.33Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11085contigS-firma_F_contig11085:2178..3854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog115417.EPrPW00000018335
PFAMsWD40
Max annot lvl121069|Pythiales
Evalue2.94e-48
EggNOG OGsKOG0288@1|root,KOG0288@2759|Eukaryota,1MCNH@121069|Pythiales
DescriptionAutophagy protein 16. Source PGD
COG categoryS
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-11_006240.1
Exons7
Model size1173
Cds size1173
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.253072-CDS-S-firma_F_contig11085:2177..22651622815657.253072-CDS-S-firma_F_contig11085:2177..2265Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2178..2265 -
1696949483.18325-CDS-S-firma_F_contig11085:2177..22651696949483.18325-CDS-S-firma_F_contig11085:2177..2265Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2178..2265 -
1622815657.2710223-CDS-S-firma_F_contig11085:2329..24281622815657.2710223-CDS-S-firma_F_contig11085:2329..2428Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2330..2428 -
1696949483.1961308-CDS-S-firma_F_contig11085:2329..24281696949483.1961308-CDS-S-firma_F_contig11085:2329..2428Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2330..2428 -
1622815657.2824492-CDS-S-firma_F_contig11085:2483..25311622815657.2824492-CDS-S-firma_F_contig11085:2483..2531Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2484..2531 -
1696949483.2065175-CDS-S-firma_F_contig11085:2483..25311696949483.2065175-CDS-S-firma_F_contig11085:2483..2531Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2484..2531 -
1622815657.2935421-CDS-S-firma_F_contig11085:2592..26861622815657.2935421-CDS-S-firma_F_contig11085:2592..2686Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2593..2686 -
1696949483.2162602-CDS-S-firma_F_contig11085:2592..26861696949483.2162602-CDS-S-firma_F_contig11085:2592..2686Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2593..2686 -
1622815657.3064253-CDS-S-firma_F_contig11085:2895..30781622815657.3064253-CDS-S-firma_F_contig11085:2895..3078Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2896..3078 -
1696949483.225305-CDS-S-firma_F_contig11085:2895..30781696949483.225305-CDS-S-firma_F_contig11085:2895..3078Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 2896..3078 -
1622815657.320974-CDS-S-firma_F_contig11085:3136..35521622815657.320974-CDS-S-firma_F_contig11085:3136..3552Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 3137..3552 -
1696949483.2435262-CDS-S-firma_F_contig11085:3136..35521696949483.2435262-CDS-S-firma_F_contig11085:3136..3552Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 3137..3552 -
1622815657.33327-CDS-S-firma_F_contig11085:3609..38541622815657.33327-CDS-S-firma_F_contig11085:3609..3854Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 3610..3854 -
1696949483.2549033-CDS-S-firma_F_contig11085:3609..38541696949483.2549033-CDS-S-firma_F_contig11085:3609..3854Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig11085 3610..3854 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11085.1440.1prot_S-firma_F_contig11085.1440.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig11085 2178..3854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig11085.1440.1

>prot_S-firma_F_contig11085.1440.1 ID=prot_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=391bp
QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAE
LERKLAVAEAGRGKPARRAGAGAATDDLRDLAGTMPASSCAVPTSVTHSI
RAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLKGTLRGAADQPV
MSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHN
LAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASADGSMIVTGHQDK
SVRLWDARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRV
FDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTK
SHELEATLSAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ*
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mRNA from alignment at S-firma_F_contig11085:2178..3854-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig11085.1440.1 ID=mRNA_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1677bp|location=Sequence derived from alignment at S-firma_F_contig11085:2178..3854- (Sphaerotrichia firma ET2_F female)
CAGCTTGCGAGGCACCGTACCCTGCTTCAAGACCGGGAGGCGGAGTGCAC CAAGATGCGGGCTGAAAACGAAACCTACGTGTCCCGCATGCTTGACGACA AGCTGAAAATGGTGGACGAAATGAACCGCATGAACGCCCTCGTGGCGGAG CTGGAGCGCAAGCTGGCTGTGGCAGAGGCAGGGCGGGGCAAACCCGCACG CCGGGCCGGGGCCGGGGCTGCTACTGATGACCTCCGTGACCTAGCGTGCG TACGATGCGGGTGCTGTGCGCGACGTTTGCTCAACCCCCCCCCCCCCCCC AGTGGAACAATGCCAGCATCCAGCTGCGCGGTCCCCACCAGCGTCACGCA CTCCATTCGGGCCCACACCACAGAAGTCAACGCGTGCTGCATGAACGACT CGGGGGCGCTGGTGTACACCGCGTCCTCGGACGGCACTTGTCGCATTTGG GACGTGGTGACCGGCAAGCTGAAGGGCACCCTCCGTGGCGCCGCCGACCA GCCCGTCATGTCCGTGTTTGCCAAGGGCGACCGCGTCCTGGGGGGCTGCA ACGACCACAAACTCCGGCTGTGGGACTCCAACACGGAGCGGGTGCAGGCA ACAATGACCGGCCACAGCGGAAAGATTTACGGCTGCCAGCTTCTCCCGGA GCACAACCTGGCCGTCAGCTGCAGCACGGACCGCTCCATCAAGCTGTGGG ACGTCGGACGTGGACACTGTGCGGTGGTGTGGCTGGGTTTTGCACCAGCT TGTGTCACCCCCCCCCCCCCCGAAAGGTGTCCGCACTATTGCGTCAACGT CCATCGTGAACTCCCTCGGGGCGTCCGCTGATGGCTCCATGATTGTCACT GGGCACCAGGACAAGAGCGTTCGCCTGTGGGACGCTCGCAAGGGGCAGCG CCTTGCAGAAAACCGCACGGCGCACACCGCTGCCGTCACCAGCTCCACGT TTTCCTTGGGTGTGTTGGGGTAGTGTGGCAGCCCGTAGCTTGGGATGACC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTCTGCACGGTTCCT CCCTCTAGCAACCGNNNNNNNNNNTGGGTTCTTTGGTGTTTTTTCTTTTG TGTGTGTGGGTTGTTTGTTTGTTTTTTTGTTTTGTGGTTTGCCCTCCCCC CCCCCCCCTGCCCGACAGGGCTTGGGATGGCACCCATCATTTTGACGGCC AGCCGTGACAACATGCTGCGTGTGTTTGACGGGTTTACACTGATGGAATC CGCGCGGCTGAGGTGTGTCTGTGTCTGTGGTTGTGGTTTAGGGTGTGATG GAGCTCACACTGCTTCCACCCAGCAACGAATCGTTCATGCTGCGGTACAA CTGGTCGCATGCGACGTTCAGGTGGGGCTGCTCCACTTGCGCCGTGTTGT GTGTGTCAATGACGCTATTTCTGCAGCCCGGATGCGGAGCACGCCGCGTG TGGTGCGGCTTCCGGAGAGGTGCTGGTGTGGAACACAAAGTCTCATGAGC TGGAAGCCACGCTGAGCGCCCACAAGTGCGCCCCACATTTTTCACCGTAT TGCACTGCCCCTTACCAGCCCCCCCCCCCCACCCCCCAGGGCTGCCGTGT CGTGCACGGCCTGGTCCCTGGACGGCCGCCACATGGCGAGCTGCGACGGG GAGGGATTCTTGGCGCTTTACCAGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig11085:2178..3854-

>mRNA_S-firma_F_contig11085.1440.1 ID=mRNA_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2346bp|location=Sequence derived from alignment at S-firma_F_contig11085:2178..3854- (Sphaerotrichia firma ET2_F female)
CAGCTTGCGAGGCACCGTACCCTGCTTCAAGACCGGGAGGCGGAGTGCAC
CAAGATGCGGGCTGAAAACGAAACCTACGTGTCCCGCATGCTTGACGACA
AGCTGAAAATGGTGGACGAAATGAACCGCATGAACGCCCTCGTGGCGGAG
CTGGAGCGCAAGCTGGCTGTGGCAGAGGCAGGGCGGGGCAAACCCGCACG
CCGGGCCGGGGCCGGGGCTGCTACTGATGACCTCCGTGACCTAGCCAGCT
TGCGAGGCACCGTACCCTGCTTCAAGACCGGGAGGCGGAGTGCACCAAGA
TGCGGGCTGAAAACGAAACCTACGTGTCCCGCATGCTTGACGACAAGCTG
AAAATGGTGGACGAAATGAACCGCATGAACGCCCTCGTGGCGGAGCTGGA
GCGCAAGCTGGCTGTGGCAGAGGCAGGGCGGGGCAAACCCGCACGCCGGG
CCGGGGCCGGGGCTGCTACTGATGACCTCCGTGACCTAGCTGGAACAATG
CCAGCATCCAGCTGCGCGGTCCCCACCAGCGTCACGCACTCCATTCGGGC
CCACACCACAGAAGTCAACGCGTGCTGCATGAACGACTCGGGGGCGCTGG
TGTACACCGCGTCCTCGGACGGCACTTGTCGCATTTGGGACGTGGTGACC
GGCAAGCTGAAGGGCACCCTCCGTGGCGCCGCCGACCAGCCCGTCATGTC
CGTGTTTGCCAAGGGCGACCGCGTCCTGGGGGGCTGCAACGACCACAAAC
TCCGGCTGTGGGACTCCAACACGGAGCGGGTGCAGGCAACAATGACCGGC
CACAGCGGAAAGATTTACGGCTGCCAGCTTCTCCCGGAGCACAACCTGGC
CGTCAGCTGCAGCACGGACCGCTCCATCAAGCTGTGGGACGTCGGACGTG
GACACTTGGAACAATGCCAGCATCCAGCTGCGCGGTCCCCACCAGCGTCA
CGCACTCCATTCGGGCCCACACCACAGAAGTCAACGCGTGCTGCATGAAC
GACTCGGGGGCGCTGGTGTACACCGCGTCCTCGGACGGCACTTGTCGCAT
TTGGGACGTGGTGACCGGCAAGCTGAAGGGCACCCTCCGTGGCGCCGCCG
ACCAGCCCGTCATGTCCGTGTTTGCCAAGGGCGACCGCGTCCTGGGGGGC
TGCAACGACCACAAACTCCGGCTGTGGGACTCCAACACGGAGCGGGTGCA
GGCAACAATGACCGGCCACAGCGGAAAGATTTACGGCTGCCAGCTTCTCC
CGGAGCACAACCTGGCCGTCAGCTGCAGCACGGACCGCTCCATCAAGCTG
TGGGACGTCGGACGTGGACACTGTGTCCGCACTATTGCGTCAACGTCCAT
CGTGAACTCCCTCGGGGCGTCCGCTGATGGCTCCATGATTGTCACTGGGC
ACCAGGACAAGAGCGTTCGCCTGTGGGACGCTCGCAAGGGGCAGCGCCTT
GCAGAAAACCGCACGGCGCACACCGCTGCCGTCACCAGCTCCACGTTTTC
CTTGGGTGTCCGCACTATTGCGTCAACGTCCATCGTGAACTCCCTCGGGG
CGTCCGCTGATGGCTCCATGATTGTCACTGGGCACCAGGACAAGAGCGTT
CGCCTGTGGGACGCTCGCAAGGGGCAGCGCCTTGCAGAAAACCGCACGGC
GCACACCGCTGCCGTCACCAGCTCCACGTTTTCCTTGGGGCTTGGGATGG
CACCCATCATTTTGACGGCCAGCCGTGACAACATGCTGCGTGTGTTTGAC
GGGTTTACACTGATGGAATCCGCGCGGCTGAGGGCTTGGGATGGCACCCA
TCATTTTGACGGCCAGCCGTGACAACATGCTGCGTGTGTTTGACGGGTTT
ACACTGATGGAATCCGCGCGGCTGAGCAACGAATCGTTCATGCTGCGGTA
CAACTGGTCGCATGCGACGTTCAGCAACGAATCGTTCATGCTGCGGTACA
ACTGGTCGCATGCGACGTTCAGCCCGGATGCGGAGCACGCCGCGTGTGGT
GCGGCTTCCGGAGAGGTGCTGGTGTGGAACACAAAGTCTCATGAGCTGGA
AGCCACGCTGAGCGCCCACAACCCGGATGCGGAGCACGCCGCGTGTGGTG
CGGCTTCCGGAGAGGTGCTGGTGTGGAACACAAAGTCTCATGAGCTGGAA
GCCACGCTGAGCGCCCACAAGGCTGCCGTGTCGTGCACGGCCTGGTCCCT
GGACGGCCGCCACATGGCGAGCTGCGACGGGGAGGGATTCTTGGCGCTTT
ACCAGTGAGGCTGCCGTGTCGTGCACGGCCTGGTCCCTGGACGGCCGCCA
CATGGCGAGCTGCGACGGGGAGGGATTCTTGGCGCTTTACCAGTGA
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