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Homology
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A6H5KLU3_9PHAE (Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU3_9PHAE) HSP 1 Score: 567 bits (1462), Expect = 2.250e-185 Identity = 419/600 (69.83%), Postives = 435/600 (72.50%), Query Frame = 1
Query: 223 DSTAGSGAAEEAREPLLDDGLGRHLP--GRSAGEGSRAAAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGG--------ATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLY 1992
DS AG GAAEEAR PLL++G G P GR +DDGALD ADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDES LDPSSVRLGKS VNA +IVLVLAAAT VIVWMYWMRCM+CL+GYMAMSSA+LLGVMGGAVW AALEV+QLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQ YLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELP+ PPR XXXXXXXXXXXXXXX XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX + S APLLEL G AA G A SP++RG A A A SP Q FG S + AL+ SP XXXXXXXXXXXXXXX GVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIG GT FYLLTRFS+QPYVE LN+TPLY
Sbjct: 10 DSDAGLGAAEEARAPLLEEGHGTLQPPHGRRTAHQGNPDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTNLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXXXXXXGGPQEGDPYSSPRTPVGTATVGGGLADLAGXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXRRPGAGGAGASESVAAPLLELV---ESGTAAVAVGDASADGSGTTSDRGQVR-SPRARGAAAPAAASGDLDSCAAVSPXXXXXXXXXQRFGGASAEGDALIQSPRXXXXX-XXXXXXXXXXXXXXXXXEMGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNDTPLY 599
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: D8LTV7_ECTSI (Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV7_ECTSI) HSP 1 Score: 561 bits (1447), Expect = 2.040e-183 Identity = 406/593 (68.47%), Postives = 426/593 (71.84%), Query Frame = 1
Query: 223 DSTAGSGAAEEAREPLLDDGLGRHLPG---RSAGEGSRAAAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLY 1992
DS AG GAAEEAR PLL++G G P R+A +G+ +DDGALD ADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDES TLDPSSVRLGKS VNA +IVLVLAAAT VIVWMYWMRCM+CL+GYMAMSSA+LLGVMGGAVW AALEV+QLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQ YLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELP+ PPR XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX VAA PLLEL S A D A+ + RG+ GG PP G+ V ++ + SP S XXXXXXXXXXX GVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIG GT FYLLTRFS+QPYVE LNETPLY
Sbjct: 10 DSDAGVGAAEEARAPLLEEGHGTLQPPHRRRTAQQGN-PDENGQDDGALDQADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESTTTLDPSSVRLGKSFVNALIIVLVLAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQAYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPAGPPRXXXXXXXXXXXXXXXXXXXQPGATGGPQEGDVSSSPRAPVGTATMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGDHSSARRPGADSAGASESVAA----PLLELV-ESGTAAVAVGDASADGSGTRSGREQGKRRLATVRRGIRGGGCLDPEPP---------GWRTVQAEKKLELFSPVPTSSRAXXXXXXXXXXXXX------GVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGFGTVFYLLTRFSIQPYVEALNETPLY 581
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: W7TKB5_9STRA (Presenilin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB5_9STRA) HSP 1 Score: 336 bits (861), Expect = 5.020e-99 Identity = 253/593 (42.66%), Postives = 298/593 (50.25%), Query Frame = 1
Query: 244 AAEEAREPLLDDGLGRHLPGRSAGEGSRAAAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESAATL--DPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPS-------APPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
A+ REP GR P + SRA LD DV YSANSF AV+KPV L M L++ + V++ E + +SVY + D A D +SV+LGKSLVNA IV V+ AT V+V +Y RCMKCL GYMA+SS +LLG+MGG +W AL + LPCD FT+ VL+NFA VGVVAIFYQKGIPT VTQGYLV S+IMAWQLSRFEEWTGW LLVVLALYDLCAVLTPCGPL+ LV LMQEY EPMPGLLYEAELP PP R + A TQ+ P L ++ S G EDG G RG G +G P S+G S +G G+PE++RS IKLGLGDFVFYSVLV KAALYGF AAC +VI+ GLGATLVLL+V+R ALPALPISIGLG FYLLTR ++ PY++ L TP+Y+
Sbjct: 14 ASHVRREPTSTSYEGRS-PQLPLADASRAEG-------LDIEDVLYSANSFWAVLKPVALTMFLASLVVVNVAFATE---DQGVSVYAIDDGDADGNGGDSNSVKLGKSLVNALTIVGVICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGVVAIFYQKGIPTWVTQGYLVMISVIMAWQLSRFEEWTGWALLVVLALYDLCAVLTPCGPLRYLVGLMQEYNEPMPGLLYEAELPGHARHHHRIPPSTALRGSERATGALASAGSLDGGCEGDDVRLQAPVGDDGAFSPAMALGSQAHTVHSTSPPSPLDPLLDGTQSS----------------------------PGGTHLGQHHPPHPSRSLRRVSR-SQGGETLLEDG------MGSPVEGGNEHGGESERGERGESGRGHGP--------SEGLSSSSHHQG---GTPEQERS------------------------IKLGLGDFVFYSVLVGKAALYGFATCAACFLVIIAGLGATLVLLSVFRKALPALPISIGLGVLFYLLTRVAIIPYIDALVSTPIYV 525
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A7S2XWZ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ8_9STRA) HSP 1 Score: 328 bits (842), Expect = 2.490e-97 Identity = 236/550 (42.91%), Postives = 280/550 (50.91%), Query Frame = 1
Query: 370 DVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATN-SALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRR---RPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGS----PEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
++ YS NSFMAVVKPV + M L++++ V++ ++ + S LS YEVYD S + D SVRLGKS++NA IVLVLA AT IV +Y RCMKCL+GYM SS +LLG+MGG V AL+ + + D +TYY +L+NF++VGV+AIFYQ+GIP VVTQGYLV TS+IMAWQL+RFEEWTGW LLVVLA YDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL S PR R + A + P +PE P + AG G A GSP GD+ + GA GS P Q +A SIKLGLGDFVFYSVLVSKAAL+GF A C + I GLGATLVLL+VY+MALPALPISI LG YLLTR L PYVE L P+Y+
Sbjct: 12 EMVYSVNSFMAVVKPVMITMLLASYVVVNVSTEESRSQQMSGLSAYEVYDTSDES-DSDSVRLGKSVINALTIVLVLAGATFAIVLLYKFRCMKCLIGYMMFSSVMLLGIMGGMVLWTALDKWNVVMDEYTYYFILYNFSMVGVIAIFYQQGIPMVVTQGYLVLTSVIMAWQLARFEEWTGWSLLVVLAFYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELRSETGSNVSPTPRGGRKSYQRDSESGLE--------------------------------------------------SASIGPDSAGRVGVETEETHLLPQSSGE--------------TAPERPRVRGAGRKQEGEAG--------------------NGSPDGS-----------------------SGDIQQNGGAPPGSVNHPPGPQAAAPAAYVVDPGDEDLVVYQER---SIKLGLGDFVFYSVLVSKAALFGFLTCATCFLAITAGLGATLVLLSVYKMALPALPISIFLGVTCYLLTRVLLIPYVENLAAVPIYI 450
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A7S2F2R2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2R2_9STRA) HSP 1 Score: 286 bits (732), Expect = 3.670e-83 Identity = 207/523 (39.58%), Postives = 258/523 (49.33%), Query Frame = 1
Query: 427 MTLSAFITVSLYSDAEGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
M L++ V+L + + A +VY V DES D ++V+LGKS+VNA +IV VLAAAT IV +Y RCMK L+GYM +SS +LLG+MG + ALE++Q+PCDA T+Y + +NFAVVGV++IF++KGIP +TQ YLV TS++MAWQLS FEEWTGWCLLV LALYDLCAVLTPCGPLKALV LMQEY EPMPGLLYEAELPS N P V+P +AS + L + A + G E T+P + V +P E+ SIKLGLGDFVFYSVLVSKAALY F A C +VI+ GLGATLVLL+V++ ALPALPISIGLG +F+ LTRF + P++E L TP+Y+
Sbjct: 1 MLLASLAVVALQEETGEESLDAYTVYNVGDESG---DTNTVKLGKSIVNALIIVCVLAAATFGIVCLYKYRCMKLLIGYMMLSSMMLLGLMGSLMLWTALELWQVPCDAITFYFIAYNFAVVGVISIFWKKGIPMQITQFYLVCTSVLMAWQLSHFEEWTGWCLLVALALYDLCAVLTPCGPLKALVTLMQEYNEPMPGLLYEAELPSED------NGTPT---------------------------------------------------------------VIPPATSLNQ----------------------------SASSAQEMRSLGQQQRQDTAVVQGAGVENG---------------------------TAPTS--------------------VHTPTEETEI--------------QAFGEADRSIKLGLGDFVFYSVLVSKAALYDFATCAICFLVILSGLGATLVLLSVFQKALPALPISIGLGVSFFFLTRFLIVPFIEALAGTPIYV 362
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A835ZDC4_9STRA (Presenilin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC4_9STRA) HSP 1 Score: 267 bits (683), Expect = 9.570e-76 Identity = 215/509 (42.24%), Postives = 258/509 (50.69%), Query Frame = 1
Query: 541 SSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGA------------------------ALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
SS LGKSLVN+ +IV VLA AT +IV +Y RCM+CLLGYM +SS LLG+MGG V+ AL+++Q+P D FT+ LWNFA VGV+AIFYQKG+PTVVTQ YLVATS+IMAWQLSRF+EWTGW LLVVLA+YDLCAVL+PCGPLKALVNLMQEY EPMPGLLYEAELP RP AR AXXXXXXXXXXXX + AG V A +L L E+G AE +P+ G +GG GG + + EE+R+ IKLGLGDFVFYSVLVSKA LY FTA+ +C+ ++ GL ATLVLL++++ ALPALPISI LG A Y +TRF++QP + L LY+
Sbjct: 35 SSALLGKSLVNSLVIVAVLAVATTLIVLLYKFRCMRCLLGYMMLSSVSLLGLMGGLVFLTMCCSFGTRDTRALHALLRATPCVQALDMWQIPMDMFTFIMCLWNFAAVGVIAIFYQKGLPTVVTQAYLVATSVIMAWQLSRFDEWTGWALLVVLAMYDLCAVLSPCGPLKALVNLMQEYNEPMPGLLYEAELP------RPVAARAAXXXXXXXXXXXXGA---------------------------------------------SSAGA---------------------RLASEDPQDYDVGPGVGLMASAVVLML----------NEEGAAE---------------APRQGGDSGGG--------TGGDAHRRESXXXXXXXXXXXXXXEEERN------------------------IKLGLGDFVFYSVLVSKAGLYSFTAFVSCLCAVLCGLMATLVLLSLHKAALPALPISIALGVATYFVTRFAMQPALVHLGSQGLYV 414
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A7S4DGE7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGE7_HETAK) HSP 1 Score: 247 bits (630), Expect = 1.200e-70 Identity = 141/243 (58.02%), Postives = 176/243 (72.43%), Query Frame = 1
Query: 253 EAREPLLDDGLGRHLPGRSAGEGSRAAAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKA 981
+ R PL+D + A +G A E LD +V Y+ NSFMAV+KPVT+ M L++ TV + SD+ T+S+LS YEVYD S+A +SVRLG+S+VNA ++V VLAAAT IV +Y RCMKCL+GYM SS +LLG MGG V L+ +++P D +T+ +++NF VVGV++IFYQKGIPT VTQ YLVATSIIMAWQLSRFE+WTGW LLVVLALYDLCAVLTPCGPLKA
Sbjct: 23 DERRPLIDQAM--------AEQGRSNADEPTAREGLDLEEVTYAINSFMAVLKPVTVTMVLASIATVYVQSDSID-TSSSLSAYEVYDTSSAAGTSASVRLGESIVNALVVVCVLAAATFGIVLLYKYRCMKCLVGYMMCSSVMLLGAMGGMVLWTLLQKWEVPFDQYTFLFIVYNFGVVGVISIFYQKGIPTGVTQSYLVATSIIMAWQLSRFEDWTGWSLLVVLALYDLCAVLTPCGPLKA 256
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: B7FQB3_PHATC (Presenilin n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQB3_PHATC) HSP 1 Score: 231 bits (590), Expect = 1.150e-64 Identity = 170/477 (35.64%), Postives = 220/477 (46.12%), Query Frame = 1
Query: 571 NAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGA-LVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
NA ++V + A T VIV +Y +R MKCL+GYM +SS LLGV+GG + A+ ++++P D T+YG ++NF VVGV+AIF+ +GIP VTQGYL+ATS+I+AW LS F++WT W LL++LALYDLCAVLTPCGPLKALVNLM + + P MPGLL+EAELP PEA P G+ + D AE S EG+ LV S E+Q AG SI+LGLGDF+FYSVLV+KAA Y F +AAC++VI+ GLG TLVLL+VY ALPALPISI LG FY+LTR+S++P++E + P Y+
Sbjct: 3 NALIMVSFICALTFVIVLLYHLRFMKCLIGYMIISSGTLLGVLGGNMMQVAVAIYEIPVDKLTFYGFIYNFCVVGVLAIFFGRGIPKSVTQGYLIATSVILAWHLSYFDDWTTWTLLMMLALYDLCAVLTPCGPLKALVNLMSQDDSPDMPGLLFEAELP----------------------------------------------------------------------------------------------------------------------PEAKR-------PGGKKSRPDNSAETNSQV-----------------------------------------TSHQEGSGLVKSTEQQDQAGNDGHN----------------SIRLGLGDFIFYSVLVAKAAQYSFATFAACLLVILAGLGGTLVLLSVYHSALPALPISIFLGVIFYILTRWSVEPWIEAILTRPYYV 297
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A1Z5KQA4_FISSO (Presenilin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQA4_FISSO) HSP 1 Score: 240 bits (612), Expect = 1.150e-64 Identity = 194/548 (35.40%), Postives = 254/548 (46.35%), Query Frame = 1
Query: 370 DVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDA-----EGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEP-MPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAAEDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGVSIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNETPLYL 1995
++ YS++S+ A+ KPVTL M LSA V + DA E A +A + V D + S L SL NA +IV V+ T +IV +Y M+ MKCL+GYM S LLG++GG V A++V+ +P D T+Y ++NF +VGV+A+F+ +GIPT VTQGYLVATS+I+AW LS F++WT W LL++LALYDLCAVLTPCGPLK LV M + P MPGLL+EAELP P +RP + + +P V PE P E R A G E Q RG V L+ G P+ R SI+LGLGDF+FYSVLV+KAA Y F +AAC++VI+ GLG TLVLL+VY ALPALPISI +G FY+LTR+ ++P+VE + E P Y+
Sbjct: 66 ELIYSSSSYYAIAKPVTLTMVLSALAVVLINDDATKQGNEAAMANAYQYFSVNDAGQS----SGQNLAHSLANALIIVSVICGMTFMIVVLYRMKFMKCLIGYMIFCSGTLLGMLGGNVLQTAVQVYNIPVDKGTFYLFVYNFCIVGVLAVFFGQGIPTSVTQGYLVATSVILAWHLSFFDDWTAWTLLLMLALYDLCAVLTPCGPLKFLVEAMSQEGSPEMPGLLFEAELP--PEAKRPVGSS--------------------RGRANIAASASDVERSAPPNPVSQPMDGSSESPRVKIPLAIAKVYQLPVVSIPSSSMSIMFPDRSSDTIGTTSPLLTNSDSTVIL-PENPTAEQLLAKVVVRLPAHGGRLEHV---------------QRRGK-----------------------KVYLERDRH-GVPKRYLWVDRNGKVFAEMKDGDEEKPEKN-SIRLGLGDFIFYSVLVAKAAQYSFATFAACILVILAGLGGTLVLLSVYHHALPALPISIFMGIVFYVLTRWFIEPWVEAVLEKPYYV 546
BLAST of mRNA_S-firma_F_contig1007.140.1 vs. uniprot
Match: A0A7S1G978_9STRA (Presenilin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G978_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.010e-63 Identity = 204/573 (35.60%), Postives = 267/573 (46.60%), Query Frame = 1
Query: 331 AAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAFITVSLYSDAEGATNSA-LSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLVLAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLPCDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRFEEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAELPSAPPRRRPRNARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAASPEAPLLELAGPSPRGRAAA-EDGGAEXXXXXXXXXXXXXXGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVGSPEEQRSAGRRXXXXXXXXXXXXXXXXTGV---------------------SIKLGLGDFVFYSVLVSKAALYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTRFSLQPYVEVLNE 1980
+ + D A D D +Y+A AV+KPV + M L++++ ++ ++ A +A LSVY VY ES + + ++G+SLVNA +IV V+ T ++V Y RC+K ++GY+ +SA LLG GG V A V+ + D T+ ++WNFA+VGVVA+FYQKGIP VTQ YLVA S+IM+W +++F EWTGW LL+ LALYDLCAVL+PCGPLKALV L QE ++P+PGL+YEA++ R R + P P G G AA+ D AE PARG V + G + EE R+AG XXXXXXXXXXXXXXXX SIKLGLGDFVFYSVLV KAAL+ T +AC V ++ GL TL LL V++ ALPALPISI G FY + RF+L PY+ L E
Sbjct: 26 SGDHRDPHAEDGEDPSYTARHLAAVLKPVAITMLLASWVVANIREASQDAAIAAGLSVYMVYTESGSGNQSTGEKVGQSLVNALVIVSVICVVTFILVLCYKYRCLKLMIGYLMFASASLLGYSGGFVVSTAFLVYDVRIDWITFAFIMWNFAIVGVVAVFYQKGIPRAVTQSYLVAVSVIMSWIVTKFPEWTGWALLIALALYDLCAVLSPCGPLKALVKLAQERQDPIPGLVYEADVAEDSSDRVDR------------------------------------------------------------------------------------------------------VRDTLSRPSGPGARSGGGGTDGEAASVRDVSAEL-------------------------------PARG----------VDAEAGEARATAEETRAAGTAXXXXXXXXXXXXXXXXXXXXXXXAPRPRAASYEHQGGEDRSIKLGLGDFVFYSVLVGKAALFDLTTLSACFVGVLMGLVGTLFLLGVFKKALPALPISILFGVVFYAVGRFALVPYMVELVE 455
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LTV7 |
| Preferred name | PSEN1 |
| PFAMs | Presenilin |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04505,ko:K04522,ko:K06060 |
| KEGG Pathway | ko04310,ko04330,ko04722,ko05010,ko05165,map04310,map04330,map04722,map05010,map05165 |
| KEGG Module | M00682 |
| GOs | GO:0000003,GO:0000041,GO:0000045,GO:0000122,GO:0000186,GO:0000323,GO:0000775,GO:0000776,GO:0001501,GO:0001505,GO:0001568,GO:0001654,GO:0001666,GO:0001708,GO:0001754,GO:0001756,GO:0001764,GO:0001773,GO:0001775,GO:0001919,GO:0001921,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002027,GO:0002036,GO:0002038,GO:0002119,GO:0002164,GO:0002244,GO:0002252,GO:0002253,GO:0002263,GO:0002265,GO:0002274,GO:0002275,GO:0002283,GO:0002285,GO:0002286,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003143,GO:0003407,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005640,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005790,GO:0005791,GO:0005794,GO:0005798,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006486,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006825,GO:0006836,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006903,GO:0006909,GO:0006914,GO:0006915,GO:0006928,GO:0006936,GO:0006941,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007033,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007175,GO:0007176,GO:0007219,GO:0007220,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007507,GO:0007548,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007626,GO:0008013,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008283,GO:0008284,GO:0008306,GO:0008324,GO:0008406,GO:0008544,GO:0008593,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009952,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010453,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010942,GO:0010958,GO:0010975,GO:0010976,GO:0010977,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015630,GO:0015677,GO:0015695,GO:0015696,GO:0015833,GO:0015871,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016055,GO:0016079,GO:0016080,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016324,GO:0016477,GO:0016485,GO:0016787,GO:0017015,GO:0017156,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0019867,GO:0019904,GO:0021532,GO:0021537,GO:0021543,GO:0021782,GO:0021795,GO:0021870,GO:0021885,GO:0021895,GO:0021904,GO:0021915,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022404,GO:0022405,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030165,GO:0030182,GO:0030318,GO:0030323,GO:0030324,GO:0030326,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030587,GO:0030659,GO:0030667,GO:0030900,GO:0031090,GO:0031149,GO:0031150,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031594,GO:0031674,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032091,GO:0032092,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032890,GO:0032892,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0033158,GO:0033160,GO:0033267,GO:0033554,GO:0033619,GO:0033673,GO:0033674,GO:0034205,GO:0034220,GO:0034641,GO:0034645,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035220,GO:0035222,GO:0035239,GO:0035253,GO:0035282,GO:0035295,GO:0035333,GO:0035577,GO:0036064,GO:0036211,GO:0036230,GO:0036269,GO:0036293,GO:0036303,GO:0036477,GO:0040011,GO:0040028,GO:0042058,GO:0042059,GO:0042063,GO:0042110,GO:0042119,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042303,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042391,GO:0042461,GO:0042462,GO:0042500,GO:0042582,GO:0042592,GO:0042633,GO:0042659,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0042982,GO:0042987,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043011,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043198,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043299,GO:0043312,GO:0043392,GO:0043393,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043413,GO:0043473,GO:0043523,GO:0043524,GO:0043549,GO:0043588,GO:0043589,GO:0043603,GO:0043949,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044463,GO:0044464,GO:0044671,GO:0045055,GO:0045121,GO:0045137,GO:0045165,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045296,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045747,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046530,GO:0046649,GO:0046822,GO:0046824,GO:0046873,GO:0046903,GO:0046907,GO:0046983,GO:0048066,GO:0048143,GO:0048167,GO:0048190,GO:0048286,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048708,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048837,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050435,GO:0050673,GO:0050730,GO:0050732,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050808,GO:0050818,GO:0050820,GO:0050839,GO:0050851,GO:0050852,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051336,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051402,GO:0051438,GO:0051444,GO:0051563,GO:0051580,GO:0051582,GO:0051588,GO:0051590,GO:0051604,GO:0051606,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051960,GO:0051961,GO:0051962,GO:0051966,GO:0052547,GO:0052548,GO:0055037,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060047,GO:0060048,GO:0060070,GO:0060075,GO:0060173,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060998,GO:0060999,GO:0061053,GO:0061062,GO:0061097,GO:0061099,GO:0061136,GO:0061371,GO:0061458,GO:0061900,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070001,GO:0070011,GO:0070050,GO:0070085,GO:0070201,GO:0070482,GO:0070588,GO:0070765,GO:0070838,GO:0070887,GO:0070925,GO:0070997,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090092,GO:0090287,GO:0090316,GO:0090596,GO:0090647,GO:0090702,GO:0097028,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098609,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098687,GO:0098771,GO:0098773,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099177,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106027,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0140029,GO:0140096,GO:0150034,GO:0198738,GO:1900006,GO:1900180,GO:1900182,GO:1901135,GO:1901137,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902041,GO:1902042,GO:1902043,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902903,GO:1902905,GO:1903050,GO:1903051,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903522,GO:1903789,GO:1903793,GO:1903827,GO:1903829,GO:1903844,GO:1903959,GO:1903961,GO:1904589,GO:1904591,GO:1904645,GO:1904646,GO:1904796,GO:1904797,GO:1904951,GO:1905037,GO:1905114,GO:1905906,GO:1905908,GO:1990535,GO:2000026,GO:2000058,GO:2000059,GO:2000060,GO:2000112,GO:2000113,GO:2000272,GO:2000677,GO:2000678,GO:2001023,GO:2001025,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238 |
| Evalue | 7.68e-193 |
| EggNOG OGs | KOG2736@1|root,KOG2736@2759|Eukaryota |
| Description | subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors |
| COG category | O |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01002 |
| Hectar predicted targeting category | other localisation |
| Exons | 10 |
| Model size | 3865 |
| Cds size | 1854 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815531.9247756-UTR-S-firma_F_contig1007:10773..10917 | 1622815531.9247756-UTR-S-firma_F_contig1007:10773..10917 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1007 10774..10917 + |
| 1696949393.9293802-UTR-S-firma_F_contig1007:10773..10917 | 1696949393.9293802-UTR-S-firma_F_contig1007:10773..10917 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1007 10774..10917 + |
| 1622815532.060315-UTR-S-firma_F_contig1007:16147..18014 | 1622815532.060315-UTR-S-firma_F_contig1007:16147..18014 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1007 16148..18014 + |
| 1696949394.1418517-UTR-S-firma_F_contig1007:16147..18014 | 1696949394.1418517-UTR-S-firma_F_contig1007:16147..18014 | Sphaerotrichia firma ET2_F female | UTR | S-firma_F_contig1007 16148..18014 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815531.9361112-CDS-S-firma_F_contig1007:10917..11086 | 1622815531.9361112-CDS-S-firma_F_contig1007:10917..11086 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 10918..11086 + |
| 1696949393.9484637-CDS-S-firma_F_contig1007:10917..11086 | 1696949393.9484637-CDS-S-firma_F_contig1007:10917..11086 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 10918..11086 + |
| 1622815531.9466965-CDS-S-firma_F_contig1007:11942..12117 | 1622815531.9466965-CDS-S-firma_F_contig1007:11942..12117 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 11943..12117 + |
| 1696949393.973915-CDS-S-firma_F_contig1007:11942..12117 | 1696949393.973915-CDS-S-firma_F_contig1007:11942..12117 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 11943..12117 + |
| 1622815531.960912-CDS-S-firma_F_contig1007:12339..12452 | 1622815531.960912-CDS-S-firma_F_contig1007:12339..12452 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 12340..12452 + |
| 1696949394.0102968-CDS-S-firma_F_contig1007:12339..12452 | 1696949394.0102968-CDS-S-firma_F_contig1007:12339..12452 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 12340..12452 + |
| 1622815531.970765-CDS-S-firma_F_contig1007:12891..13109 | 1622815531.970765-CDS-S-firma_F_contig1007:12891..13109 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 12892..13109 + |
| 1696949394.0210347-CDS-S-firma_F_contig1007:12891..13109 | 1696949394.0210347-CDS-S-firma_F_contig1007:12891..13109 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 12892..13109 + |
| 1622815531.9819431-CDS-S-firma_F_contig1007:13390..13458 | 1622815531.9819431-CDS-S-firma_F_contig1007:13390..13458 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 13391..13458 + |
| 1696949394.0440075-CDS-S-firma_F_contig1007:13390..13458 | 1696949394.0440075-CDS-S-firma_F_contig1007:13390..13458 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 13391..13458 + |
| 1622815531.9952157-CDS-S-firma_F_contig1007:14075..14187 | 1622815531.9952157-CDS-S-firma_F_contig1007:14075..14187 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 14076..14187 + |
| 1696949394.064277-CDS-S-firma_F_contig1007:14075..14187 | 1696949394.064277-CDS-S-firma_F_contig1007:14075..14187 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 14076..14187 + |
| 1622815532.01145-CDS-S-firma_F_contig1007:14530..15222 | 1622815532.01145-CDS-S-firma_F_contig1007:14530..15222 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 14531..15222 + |
| 1696949394.0794942-CDS-S-firma_F_contig1007:14530..15222 | 1696949394.0794942-CDS-S-firma_F_contig1007:14530..15222 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 14531..15222 + |
| 1622815532.0267441-CDS-S-firma_F_contig1007:15347..15402 | 1622815532.0267441-CDS-S-firma_F_contig1007:15347..15402 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 15348..15402 + |
| 1696949394.0977137-CDS-S-firma_F_contig1007:15347..15402 | 1696949394.0977137-CDS-S-firma_F_contig1007:15347..15402 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 15348..15402 + |
| 1622815532.0389433-CDS-S-firma_F_contig1007:15603..15750 | 1622815532.0389433-CDS-S-firma_F_contig1007:15603..15750 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 15604..15750 + |
| 1696949394.1153495-CDS-S-firma_F_contig1007:15603..15750 | 1696949394.1153495-CDS-S-firma_F_contig1007:15603..15750 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 15604..15750 + |
| 1622815532.049376-CDS-S-firma_F_contig1007:16042..16147 | 1622815532.049376-CDS-S-firma_F_contig1007:16042..16147 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 16043..16147 + |
| 1696949394.1269853-CDS-S-firma_F_contig1007:16042..16147 | 1696949394.1269853-CDS-S-firma_F_contig1007:16042..16147 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig1007 16043..16147 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1007.140.1 >prot_S-firma_F_contig1007.140.1 ID=prot_S-firma_F_contig1007.140.1|Name=mRNA_S-firma_F_contig1007.140.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=618bp
MNVAGNENTPLFTSVLVPPLMEAMPVDSTAGSGAAEEAREPLLDDGLGRH LPGRSAGEGSRAAAEDEDDGALDHADVAYSANSFMAVVKPVTLCMTLSAF ITVSLYSDAEGATNSALSVYEVYDESAATLDPSSVRLGKSLVNAFMIVLV LAAATVVIVWMYWMRCMKCLLGYMAMSSAILLGVMGGAVWGAALEVFQLP CDAFTYYGVLWNFAVVGVVAIFYQKGIPTVVTQGYLVATSIIMAWQLSRF EEWTGWCLLVVLALYDLCAVLTPCGPLKALVNLMQEYEEPMPGLLYEAEL PSAPPRRRPRNARPAAADQQRRRRAARGDEEQGNGSGSPTGGGAVTWADR RAGVEEEEEEEEEATGWDGGRGGRTQAGVVPHSSPADSESGGGGGGVSPV GASGGGGGGGGGDDDVAASPEAPLLELAGPSPRGRAAAEDGGAERGGGGY GRAGDGDAGSPQSRGVAGGAGGATSPPARGGISASQGFGDVSLDEGALVG SPEEQRSAGRRRRSRRAAAQDEDEDEETGVSIKLGLGDFVFYSVLVSKAA LYGFTAWAACVVVIVFGLGATLVLLAVYRMALPALPISIGLGTAFYLLTR FSLQPYVEVLNETPLYL* back to topmRNA from alignment at S-firma_F_contig1007:10774..18014+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_F_contig1007.140.1 ID=mRNA_S-firma_F_contig1007.140.1|Name=mRNA_S-firma_F_contig1007.140.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7241bp|location=Sequence derived from alignment at S-firma_F_contig1007:10774..18014+ (Sphaerotrichia firma ET2_F female) AGAGCGTGGTGGTGCACGTTGGAAGAGCGGGTGATCGGGTGCAAAAGATA
GAGGGGCGAGGATATTTTCGCAGACTTTAGGGGATTGTCCTCGTGATAGC
TGGCACTGTCAATGGGCAGCAGGCAGCAGCGGTGGTGAACGTGGATGAAC
GTGGCAGGGAACGAGAACACTCCGCTCTTTACCAGTGTGCTAGTGCCACC
CCTCATGGAGGCGATGCCAGTTGACTCTACCGCCGGATCGGGTGCGGCGG
AGGAAGCACGCGAGCCCCTGCTAGATGACGGTCTTGGAAGACACCTGCCC
GGGCGTTCGGCAGGTATGTGGAACTGCTGCCTCTGGTGCTCATATCCTGC
ATGGTTAACGGTCCGCAGCAGCCCGTCGGCCGCAGTGCAGCAAGCCTGGC
CGGGGTGAGGGCTGAGGCCTGGGAAAAGCTGCGTTAGGGGTGCATTGTGC
CATAGCACGTTTGGAGTTGCTGGTAATGCCTGGTGTTTCCGGCGTTCCGG
CGTACTTGGAAGAAAGGTCGATGTACGCTCCTAATAATGGAATAATACTA
CTCCGAGTACCAGGTACCGCCTTTCAAGATTGTCTGGTCTAAGCTGCAGT
AGCAGGCAGCAGTAGTAGCTCACCTTTCTTATGACCATGTATTTTATGTG
TGAGCTGATTAGAGGGGTCAGTCGCACCCAGGTGTGCACACTTCGTTTAT
GATGGCAATCTCTTGCGTTTGGTGCCTCGAACGAACAAGCGTCCAGACCA
TCGCGCGCATTGGCCATCGATAAAGCCAACAAGTCAACAGCGTTTCCGCA
GGAAGAACACGGCAAGACCGTAGGCTACCAACAGCTTGTCCCTCAGCGAA
GAGGTGTCATGTGTATCGGTCTCCGCCCAGATCCCCGTTGAGCATCCATC
CACGTGCCTCGAGCCTTCCTCAACAAGGCTAGCAGCCACCACGACAGCAA
GAAGCGGCGCTTCAATTCTGCCACGGCCGCCCCCGTTGCGTTTGTTTGTC
GCGGTGGATATGCGTAGTTTCCTTGCCCGCAAGCATCACGCGGTCGCCCG
CCCTTTTCAACACGAAACAACTATTACACCAGATAAACATCAACAACAAC
AACAACAACAACAACAACAACAACAAGCCATGATGCCCACGCTACTGGAT
ATTCTGCTGCTGCCCGCAGGAGAAGGCAGCAGGGCCGCCGCCGAAGACGA
AGACGACGGCGCCCTAGACCACGCCGACGTGGCCTACAGCGCCAACTCGT
TCATGGCCGTGGTGAAGCCGGTGACGCTGTGCATGACGCTGTCGGCCTTC
ATCACGGTTTCCCTGTACTCGGACGCAGAGGGGGCGACCAACAGGTGTGT
ATGTCGTGTGCCTCCGTGTGTGACACTTATTTCGTACTTCTTCTGTATTC
CTGAGACTCGTCCTTTGGGTTTTATCACCTTGCGCATAATATCACGAGTA
ACATCCCGATCCACGCCCTCCCTCGTCGATTTCAGCGTGGAGCGGGCTGC
ATACTGCTGAACCATGGTGACTTCAAATCCTTTACCTCCTTTGTCGGCGT
GTGCGGTTGATTTCAGCGCGCTGTCTGTTTACGAGGTGTACGACGAGTCG
GCCGCTACCCTGGACCCTTCCTCGGTGCGGCTCGGCAAGAGCCTCGTCAA
CGCCTTCATGATCGTGTTAGTGCTAGCAGGTAAGAAGGGGAGAGAGAGAG
AGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAG
AGAGAGAGACGGACCGAGAGAGGGGGGGGGGGGGGGGGGCGTGATCGACG
GCGTGTGTAGCCGAGCCAAGGCGGGGGCGGCGAGCTTCCCGGGGTGTGTC
ATTTTCGCACAGATTCGTGTGTCATTTTGGCGGCGTTGGGTTCTACTGCT
GTAGTCTGTGGTGTTTGGTTTCATGATCTCAAATTTTATCGCAATTGTCC
CTCCCTCCAGGCCTTCGCGCGACTCGATGAACACTGGAAATAGCGCCCAC
CGGCGGTTGGCGTTTCGCGACGAAAAATGGTTCTGAATACGACCGCCCCG
GGAGTGCAATACCGACACTTACCCCCCCCCTGCACGCACTCCCCATCGAT
CCATCCGCTCCGTGTTAGCCGCAACTGTGGTGATCGTGTGGATGTACTGG
ATGAGGTGCATGAAATGCCTATTGGGCTACATGGCGATGAGCTCCGCCAT
CCTGCTGGGGGTCATGGGGGGCGCAGTGTGGGGAGCGGCCCTGGAGGTGT
TCCAGCTTCCCTGTGACGCGTTCACGTACTACGGGGTGCTGTGGAACTTC
GCCGTCGTGGGCGTCGTGGCCATATTTTACCAGAAGGTGCTACGTGCTCC
TGTTGTTGTTTTGGCTGACATTGGATGCGATTCCATCGATGACTTGTTGT
TGCTGCAGTTGTGTTATTTTGCTGACATAGGATGCAATTCCTTCCAGTTG
ATGTTGTTGGTTGTTGTTTTTGTTGTTGGTGGTGGTAGTGTTTCGTGCGC
AGGGGTGGACTCTATTCGCCAATATCATCAACCGTCAATCAGTTCGTCGA
CCTTGGCCTCACCCTTGCCGCGCCTTCACGCCCTTCCCCATGCCCCCCGC
CCTCCCAAATACAACAGGGAATCCCGACCGTAGTCACTCAAGGCTACCTT
GTGGCCACCAGCATCATCATGGCGTGGCAGCTCAGGTGACTTTTTGATGT
CGAGGGGACTTTGTTGTTTCAAAACGGTTTTGTGGTTCTGTCTGTCTCGA
AAGAGCCCCACGGGGTGGCTTTTAGGTTCTAGAGTCAACGGTTGACGATC
AAGCTCTCGTTTCCTCGCCGAGTTTGGTTCGGTTGTTTTTTTTCTCCTTG
CGCTGACTGCTGTGTGCCTTTCCCTTCTCAGGGCTGCCCCCCCCCCTTCA
CAGAAGAAGCTCCGTGTACCCGTGAGTGTGCCCGTTGTTTCGTCGCAAGG
CAGGGACTGAGGCGTCACCACGATCACTAGTCTGAGCGCGCGCTATTGCG
CTGGCAGCCTGCGAAATCGGGCATCCTGCTCCTCCCTCGCCCACTACCTT
GCTCTTATCTTCCCCTTAAGTTCTCTCTCCCTTGCTCCTTCCTTTGCCCT
GTCTCCCGTTTCTGCCTTACCGCTGCCGATCGAACGTGTTCTTTTTTGGC
AACGCAAACAACACAACTAACACCAACAACACCACCACCACCAACACCAA
CAACAACAACACCACCAACAACAACACCAACAACAACAACAACAACAACA
ACAACAACAATTATATGGCATCACGGCAAACTCCCCGCCCGCGAAACGAA
AGCCGGTTCGAGGAGTGGACGGGCTGGTGCCTCTTGGTCGTTCTCGCGCT
CTACGACCTGTGCGCGGTGCTCACGCCCTGCGGCCCGCTTAAGGCCCTGG
TCAACCTCATGCAGGTCTGCGACACCAAGCTGGGAACATACACAGCTCGA
GGGGGCGGAGGGGGTCCATACTTCTATCAGGCTTCGTCGCTACATTGGAT
CCGTTTTCGATCGACTGATGTAGCCTCCGGTCTACGTGCAGAGAGACTGC
AGTAGTTGGTCCTGGTGTCAGTGCGATTGGCACAGGCTTCGTTCGACCCG
AGCCCTGGGCAGTACTTCGCTCCTATCGGCAAAAAAACTGAAAACAGACG
CGGCGAGGGAAAACCAACCCAGCCACCAACCTCGCACGCATTCAACTCCT
CGCCCCCAACATGATGGGGCCTTCTCTCGCCGACCCCCCATGTTTGTTTT
GCCACAGGAGTACGAGGAGCCGATGCCCGGTCTGCTCTACGAGGCGGAGC
TTCCCTCCGCCCCCCCCCGAAGGCGGCCTCGAAACGCTCGACCGGCGGCG
GCCGACCAGCAACGGCGACGGCGGGCGGCGCGGGGAGACGAGGAGCAGGG
GAACGGCTCAGGCAGTCCAACCGGCGGTGGCGCCGTGACATGGGCAGATC
GGAGAGCAGGCGTTGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGACGGGG
TGGGATGGCGGGAGAGGGGGAAGAACGCAGGCGGGTGTGGTGCCGCACTC
TTCGCCTGCCGATAGCGAGAGCGGGGGCGGCGGTGGGGGCGTTTCTCCCG
TAGGTGCCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGACGATGTT
GCGGCGTCGCCAGAAGCACCATTGCTGGAACTGGCGGGGCCGTCGCCGCG
TGGCCGGGCGGCGGCGGAAGACGGCGGAGCTGAGCGTGGCGGTGGCGGCT
ACGGCCGTGCGGGCGACGGAGATGCTGGAAGCCCGCAGTCTAGAGGGGTG
GCTGGTGGTGCTGGCGGTGCTACCAGCCCCCCCGCCCGGGGAGGGATTAG
TGCGTCTCAAGGTTTCGGAGATGTCTCCTTGGACGAAGGTGCTTTGGTCG
GCAGCCCCGAAGAACAGCGGAGCGCCGGCAGAAGACGAAGAAGCAGGAGG
TGACGCGGTGATTTTTCGTTGCCCGGTGTTTCGTAGAGCTGTGATGCTGT
GTGTGTCTGTCTGCCCACTGCTGTGTCTGCGCTCGCTTGTGTTCAGCCCC
GTCCTCCCGCCCTGACTCGCACAGGGCGGCGGCGCAGGACGAAGACGAAG
ACGAAGAGACGGGAGTGTCGATAAAGCTGGTGAGCGGTTGAGGTTGTGAG
TGTACCCGGATTTTCGTGTACAGCATGTGTTCGGGAACGGCGTTTGAAGC
CATGCCTGGAAGGAAGGGTGTTCCTTCCTGGAAAAATCGCGTTGCTGGAG
TATCTATCTAGTATACATGTAGCGCTTTATTTCGTGCTGTGACCGACCCT
CGCATCTGGTGCGTTGTTTGTTGTTTGCAGGGTCTCGGCGACTTCGTGTT
CTACAGCGTCCTCGTGTCCAAGGCGGCACTGTACGGCTTCACCGCCTGGG
CGGCGTGCGTTGTCGTCATCGTCTTCGGCCTCGGGGCGACTCTCGTGCTG
CTCGCCGTGTACCGAATGGCTCTGCCGGTGAGGTCGTCTCCCGGCTGTTG
TCTGTTTGCTGGCTCTGTTGTATGCGGTGTTCAAGCACGGTATGACAATG
ATGTAGCAAAACGCTCTTGTGTGTGGCACGGCGTATGCTGCCCCGGTGCA
CCGTGCTCCCCCCTGACAACAGCCAGACGCGTCACGCTTCTGGCAGGAAT
GTTCTACCGTTGTTGTGTGTCCCTTACCCCTCCCGAACATGCCAAGTAGG
CACTGCTGCCGTGCGTTTCTCACATTCGTGTGTTGCCATCACGGCGTGCT
CGTCCACACCCCTTCGCAGGCTCTGCCCATCTCGATAGGTCTTGGTACCG
CCTTCTACCTGCTGACGAGGTTTTCGCTGCAGCCCTACGTGGAAGTCCTG
AACGAAACACCGCTCTACCTTTAGAGAGAATTCCCGCCGTTTCGGTTCGT
GGCAGGGGTGTGGTTTGGCCTTTTTCAGCGGGCTATGGGGTAGGTTTCTT
CCTGCCGAAGGAGACGAAGGGGTAAGGATAAAGGCTGGGAGTCTCAGTTC
AAGCAGACTTACAGGTTAGCACCATCTACGTGGCCGGGGGTGGATCGCGC
ATAGAACGAAGAGGGTACGAAGACCATTCGTATCGCGGGATCTGCACCAA
AATTGGAAAGAGCAAGGAGGGGGATTACCGTGGTACTCATCCGCGGGACT
TGACGAATACCCCCCATCCGTTCGAAACACAACATGCGAACCAACAAAAC
AGACCATTGAGAGGATGGCGCGAAGCTTGCAAGCGTGTCCGGGTTTATTT
TGGTGGAATGTGTCCTACGGCACTAACCCCCAAACGTTGGTTGGTAGAGG
GGTTTCGCGGGCGTGTTTGTTCGAAATTCGCTTCGAACGCAGTACAGCCT
ACATACAGCAGCTGTCTCCTGTCCCGGCCGCGGACTGATGAGATTTGTCG
ACGTTCGAAGGCGTCCTGAAACCGTCAGTAGAATGCATGTGCGAGTGTGG
AGAGGTCGCCAAGCAGCACGAACGGTGGGGAAACATCCCGGCACCTGTGA
AGCATGACGTTCTTACACGGGAGCAACAGAAGCTTGCTTCGTGCAGGATA
CTTCCAAAGCTTTCATGGTCTCTAACGTTGCCGGCGCCGTTGCAAGTGCC
CCCAAGTCCTCGGCCGATGGATGGGATTGCGAAATTAGGCTCAAGTAACC
GAGAAAAATTGTGCGGAAAGAAATTAATCTGTGGATTCACGATCGACACG
CCGGCGGTGCAAAACCCACGCTGGTCGCAAGTGATGCCGGCCGGTTGGTA
TTCCGGACAAAGGACAAGAGACTACTGCAGCTGCGGCAACCAATTGGTGC
GCGGTACTTCGCAAGCTCATCATCCGAAAGCGAAGGAAAATAACCGCAAA
TCGTCAGCAAGGAGGGTTTGATCACGGTTATCCTCTCCTCTACCCGCGAT
CCCCTGATCACACACACAAGAGCGTGCGCCGAAAAACTGAGGAAGACCCC
CGCCGTGGGCCGTACCGCGCCTTTTCGCCGAAACAACCCACAGAACATAT
GAAATGTGTTGTCCATTGTGTCGAAACCAGAAAGATATCTTCCTCGTGGG
CGACTCTATTTTCCACCGCTCTAAAACATCCGTTCTGCTAGGTCCCATTG
CAGCGCCCACGACTGTGCACCCCCCCCCCCGCCCCAACACTTTCAAACAA
AACACAAACGCATCTCTAGGCATCAGAAGCAACCGAACACACGGGTAAGA
CGGGGCTACTTCGGAAAGACGCGGCACCACAAGGACGTGACGAAACAGCG
AGAAACATACCGACGCGGTTAAAACTCCCCAAGTAGTTTCGAAACCCCCA
AGCCTCCTGCGCGTCTTAAGGCTGCGTTTCGAAACCACGAACAGATGAGT
CCGTTATCGGGCCTGTGCACAAGAGACTGCCGCCTGCCACAAGCCCATCA
CGTTAAACACCCGGCTTCCGTTCTCTCTCGCTCTCTCCCGCTCTATTTAC
CTCGGGTGCTTCATGACTAATCGAGGCTCGGTGATACGACACAACATAAC
CCGGAGTACCACACAACGAGGGAACAAAAACGTCCCCCCAAATTCAAGCC
CCGCCCTTTGGTTCGGGGTTTCCCCCTCTCTCTACGCCTCGTTACGAACT
CCCGATCAATTGTCCGGGTCTGCGTCTGCCCCCACCTGGCTCGCCTTGCT
CCTGTCAACAAACAGCCTTGATCGAATAGACAGCCGACGACAGAAGACTC
GGGTGGACCCGACGCCAAGACTCAGTCCTCCCTTCCACCCC back to topCoding sequence (CDS) from alignment at S-firma_F_contig1007:10774..18014+ >mRNA_S-firma_F_contig1007.140.1 ID=mRNA_S-firma_F_contig1007.140.1|Name=mRNA_S-firma_F_contig1007.140.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3708bp|location=Sequence derived from alignment at S-firma_F_contig1007:10774..18014+ (Sphaerotrichia firma ET2_F female) ATGAACGTGGCAGGGAACGAGAACACTCCGCTCTTTACCAGTGTGCTAGT GCCACCCCTCATGGAGGCGATGCCAGTTGACTCTACCGCCGGATCGGGTG CGGCGGAGGAAGCACGCGAGCCCCTGCTAGATGACGGTCTTGGAAGACAC CTGCCCGGGCGTTCGGCAGATGAACGTGGCAGGGAACGAGAACACTCCGC TCTTTACCAGTGTGCTAGTGCCACCCCTCATGGAGGCGATGCCAGTTGAC TCTACCGCCGGATCGGGTGCGGCGGAGGAAGCACGCGAGCCCCTGCTAGA TGACGGTCTTGGAAGACACCTGCCCGGGCGTTCGGCAGGAGAAGGCAGCA GGGCCGCCGCCGAAGACGAAGACGACGGCGCCCTAGACCACGCCGACGTG GCCTACAGCGCCAACTCGTTCATGGCCGTGGTGAAGCCGGTGACGCTGTG CATGACGCTGTCGGCCTTCATCACGGTTTCCCTGTACTCGGACGCAGAGG GGGCGACCAACAGGAGAAGGCAGCAGGGCCGCCGCCGAAGACGAAGACGA CGGCGCCCTAGACCACGCCGACGTGGCCTACAGCGCCAACTCGTTCATGG CCGTGGTGAAGCCGGTGACGCTGTGCATGACGCTGTCGGCCTTCATCACG GTTTCCCTGTACTCGGACGCAGAGGGGGCGACCAACAGCGCGCTGTCTGT TTACGAGGTGTACGACGAGTCGGCCGCTACCCTGGACCCTTCCTCGGTGC GGCTCGGCAAGAGCCTCGTCAACGCCTTCATGATCGTGTTAGTGCTAGCA GCGCGCTGTCTGTTTACGAGGTGTACGACGAGTCGGCCGCTACCCTGGAC CCTTCCTCGGTGCGGCTCGGCAAGAGCCTCGTCAACGCCTTCATGATCGT GTTAGTGCTAGCAGCCGCAACTGTGGTGATCGTGTGGATGTACTGGATGA GGTGCATGAAATGCCTATTGGGCTACATGGCGATGAGCTCCGCCATCCTG CTGGGGGTCATGGGGGGCGCAGTGTGGGGAGCGGCCCTGGAGGTGTTCCA GCTTCCCTGTGACGCGTTCACGTACTACGGGGTGCTGTGGAACTTCGCCG TCGTGGGCGTCGTGGCCATATTTTACCAGAAGCCGCAACTGTGGTGATCG TGTGGATGTACTGGATGAGGTGCATGAAATGCCTATTGGGCTACATGGCG ATGAGCTCCGCCATCCTGCTGGGGGTCATGGGGGGCGCAGTGTGGGGAGC GGCCCTGGAGGTGTTCCAGCTTCCCTGTGACGCGTTCACGTACTACGGGG TGCTGTGGAACTTCGCCGTCGTGGGCGTCGTGGCCATATTTTACCAGAAG GGAATCCCGACCGTAGTCACTCAAGGCTACCTTGTGGCCACCAGCATCAT CATGGCGTGGCAGCTCAGGGAATCCCGACCGTAGTCACTCAAGGCTACCT TGTGGCCACCAGCATCATCATGGCGTGGCAGCTCAGCCGGTTCGAGGAGT GGACGGGCTGGTGCCTCTTGGTCGTTCTCGCGCTCTACGACCTGTGCGCG GTGCTCACGCCCTGCGGCCCGCTTAAGGCCCTGGTCAACCTCATGCAGCC GGTTCGAGGAGTGGACGGGCTGGTGCCTCTTGGTCGTTCTCGCGCTCTAC GACCTGTGCGCGGTGCTCACGCCCTGCGGCCCGCTTAAGGCCCTGGTCAA CCTCATGCAGGAGTACGAGGAGCCGATGCCCGGTCTGCTCTACGAGGCGG AGCTTCCCTCCGCCCCCCCCCGAAGGCGGCCTCGAAACGCTCGACCGGCG GCGGCCGACCAGCAACGGCGACGGCGGGCGGCGCGGGGAGACGAGGAGCA GGGGAACGGCTCAGGCAGTCCAACCGGCGGTGGCGCCGTGACATGGGCAG ATCGGAGAGCAGGCGTTGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGACG GGGTGGGATGGCGGGAGAGGGGGAAGAACGCAGGCGGGTGTGGTGCCGCA CTCTTCGCCTGCCGATAGCGAGAGCGGGGGCGGCGGTGGGGGCGTTTCTC CCGTAGGTGCCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGACGAT GTTGCGGCGTCGCCAGAAGCACCATTGCTGGAACTGGCGGGGCCGTCGCC GCGTGGCCGGGCGGCGGCGGAAGACGGCGGAGCTGAGCGTGGCGGTGGCG GCTACGGCCGTGCGGGCGACGGAGATGCTGGAAGCCCGCAGTCTAGAGGG GTGGCTGGTGGTGCTGGCGGTGCTACCAGCCCCCCCGCCCGGGGAGGGAT TAGTGCGTCTCAAGGTTTCGGAGATGTCTCCTTGGACGAAGGTGCTTTGG TCGGCAGCCCCGAAGAACAGCGGAGCGCCGGCAGAAGACGAAGAAGCAGG AGGAGTACGAGGAGCCGATGCCCGGTCTGCTCTACGAGGCGGAGCTTCCC TCCGCCCCCCCCCGAAGGCGGCCTCGAAACGCTCGACCGGCGGCGGCCGA CCAGCAACGGCGACGGCGGGCGGCGCGGGGAGACGAGGAGCAGGGGAACG GCTCAGGCAGTCCAACCGGCGGTGGCGCCGTGACATGGGCAGATCGGAGA GCAGGCGTTGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGACGGGGTGGGA TGGCGGGAGAGGGGGAAGAACGCAGGCGGGTGTGGTGCCGCACTCTTCGC CTGCCGATAGCGAGAGCGGGGGCGGCGGTGGGGGCGTTTCTCCCGTAGGT GCCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGACGACGATGTTGCGGC GTCGCCAGAAGCACCATTGCTGGAACTGGCGGGGCCGTCGCCGCGTGGCC GGGCGGCGGCGGAAGACGGCGGAGCTGAGCGTGGCGGTGGCGGCTACGGC CGTGCGGGCGACGGAGATGCTGGAAGCCCGCAGTCTAGAGGGGTGGCTGG TGGTGCTGGCGGTGCTACCAGCCCCCCCGCCCGGGGAGGGATTAGTGCGT CTCAAGGTTTCGGAGATGTCTCCTTGGACGAAGGTGCTTTGGTCGGCAGC CCCGAAGAACAGCGGAGCGCCGGCAGAAGACGAAGAAGCAGGAGGGCGGC GGCGCAGGACGAAGACGAAGACGAAGAGACGGGAGTGTCGATAAAGCTGG GCGGCGGCGCAGGACGAAGACGAAGACGAAGAGACGGGAGTGTCGATAAA GCTGGGTCTCGGCGACTTCGTGTTCTACAGCGTCCTCGTGTCCAAGGCGG CACTGTACGGCTTCACCGCCTGGGCGGCGTGCGTTGTCGTCATCGTCTTC GGCCTCGGGGCGACTCTCGTGCTGCTCGCCGTGTACCGAATGGCTCTGCC GGGTCTCGGCGACTTCGTGTTCTACAGCGTCCTCGTGTCCAAGGCGGCAC TGTACGGCTTCACCGCCTGGGCGGCGTGCGTTGTCGTCATCGTCTTCGGC CTCGGGGCGACTCTCGTGCTGCTCGCCGTGTACCGAATGGCTCTGCCGGC TCTGCCCATCTCGATAGGTCTTGGTACCGCCTTCTACCTGCTGACGAGGT TTTCGCTGCAGCCCTACGTGGAAGTCCTGAACGAAACACCGCTCTACCTT TAGGCTCTGCCCATCTCGATAGGTCTTGGTACCGCCTTCTACCTGCTGAC GAGGTTTTCGCTGCAGCCCTACGTGGAAGTCCTGAACGAAACACCGCTCT ACCTTTAG back to top
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