mRNA_S-firma_F_contig1079.1054.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A6H5LDS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDS0_9PHAE) HSP 1 Score: 717 bits (1851), Expect = 2.550e-234 Identity = 531/1135 (46.78%), Postives = 622/1135 (54.80%), Query Frame = 1
Query: 796 VFRLCDEWDVGGALRHFSAATANAHRERGPLQEEQGEEGTENRRVPQRGDVGWGAVWLAQAIQGRAYEASAGFTAKAAAFGETWARTHLESWRRRLGRSCSGIGMGGVVEGAERR---EKLRLHQHCGGREADITEGIMGTFGHDGTFLRKAEIADLHHTLSRTLLLLGASGEADGHARALEQLYTTKNKMVTPECNSRGEEVAGGGDGEAYKLQLDDATAADATALRLEIELLSRTPVVLDTVETSASLRRSLLLALKDLSRAETWFSGSVPSPLEVGLRAQFLATYQGLNDKAVATALTMVIDKASGGTLSYYSPHLRWE-KGPGENPRLDGNHDTGTLKRDGASEQEPSWPRTVPSTAASTDNARSQPHEGSKKASASETCDTGKKR-----------------VRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAE-------EAMAEPR--------PNSS----GASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGA---DRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDP---NCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGA--SPEEGRKKDAA-TGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEGMIMAAANAKRQGAKESHSQVSVDEAGRAPTTKVSSAGVPGDTAPAGKEGQAAPEEAEGAVGEAGSGDGHTTRR----------------ARGDGGQSPGDGGGTRRHCFADANDHDDARVLVEVLAARTTAEYVEKAVAVAAPGAVKERVRRALCGGRDGMLRG-----------DGDSVATDWERFLKNAAVSASS 3972
+F LC+EW V AL HFSAA + + + + PL EE+ G VP R WG VWL QA+QGR EAS GF A A AFGE WA HL SWRRRLGR+CSGIGM GV EGAE +K T ++ + SR A +LRLEIELLSRTPVVL+T E++ LR LL L+ L + F GS+PSPL VG+RAQFLATYQGL+DK VATAL D ASGGTLSY S HL E + E R N T + GA Q PS P+T STA + A S P + +E TG+ V VGF+SAHFRWHSVGRLT+GLLERL +S L++FVID+S GR + ++ T+ D S G E+ + +RL AAG SIVR+ AAA +A + R NS GA ++AL+ A++A+AAL+L VLVY DVGMD TTGLAHGRLSPVQVAFWGHPGTTGLSTMDYF+TSDLFEG LGA DR ++D G+ S + + + D VG E A +G +E RQ +FSEQLVRL GLG VFDDP TFGWD + GN + + S N S +G+ R + Q HS E+ PS DG A SPE K++A RPRLYVCAQSLMKMHPAFDAVL GILA DPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAE+ + AA AA N TG A SSP+ G WSRVRF+SPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG+I AAAN + Q +E H + E G TT S G PAG Q A E G V E + +TT+ R G + G G D H D VLV L AR+T EY+ KAVAVAAPGA+K +VRRAL GR+G+L G DG VA DWERFL NAA S ++
Sbjct: 1 MFVLCEEWGVNEALHHFSAAASTSRQRQEPLPEEEDSRGG-GESVPGRDGFEWGPVWLLQAVQGRVDEASIGFAANATAFGEAWASNHLRSWRRRLGRTCSGIGMTGVFEGAESPTLGQKETRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSRPLHDNYGSRA-----------------------AASLRLEIELLSRTPVVLETNESAPLLREELLELLETLGKTPDTFWGSIPSPLGVGVRAQFLATYQGLDDKTVATALAGAFDTASGGTLSYLSRHLLLENRRRDEKSRSGENKVAATSQGIGAKMQIPSRPKTSSSTAEMSVIAGSHPIK------VAEVDTTGQDTEAVAGLGAASVGDNIQVVSVGFVSAHFRWHSVGRLTIGLLERLCTSRGLQVFVIDSSSGGRHRS---TAATVQDTSR-----GQPDEDFVLERLAAAGASIVRIQAAAAPSPRNGVDATSPTRLAPTTKVVGNSDSCGDGAGSDALQTAREAIAALRLDVLVYGDVGMDAFTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFVTSDLFEGDLGAVWGDRRRLRSDDGGA--SSADDDTRYVKHREEAGRNRDIVGDEATAARGEGDGPEAWAGAEKQDRQHAFSEQLVRLVGLGFVFDDPALTFGWDSAGEDSGNVPGRNEPSGDSWNGSRNGKHD----RGMEDRNQRHS-----EISLPSSCGGDGRAASSPEVMEKREAEEANRPRLYVCAQSLMKMHPAFDAVLAGILAADPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAEQGT---NYAAVSTCAATAHNGTGPA---SSPIR---GGLWSRVRFVSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEGLIAAAANTQCQRREEHHPEEHKGEVGALKTTP-SGRNTGGCVDPAGGGQQTAGEAPAGGVPE--NRRENTTKHPDFTSTDETSGVCVPTTRHTPGAAAGTAGARDAAVNTDDEQHMDNNVLVRSLMARSTTEYIAKAVAVAAPGALKRKVRRALRCGRNGLLHGXXXXXXXXXXXDGSDVAADWERFLTNAAASTTT 1074
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: D8LTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC4_ECTSI) HSP 1 Score: 596 bits (1536), Expect = 1.380e-190 Identity = 421/832 (50.60%), Postives = 497/832 (59.74%), Query Frame = 1
Query: 1651 QGLNDKAVATALTMVIDKASGGTLSYYSPHLRWEKGP-GENPRLDGNHDTGTLKRDGASEQEPSWPRTVPSTAASTDNARSQPH---------EGSKKASASETCDTGK--KRVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRS-STPGQ-SSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAE-------EAMAEPR------------PNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIES--IPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGA--SPEEGRKKDAA-TGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEGMIMAAANAKRQGAKESHSQVSVDEAGRAPTTKVSSAGVPGDTAPAGKEGQAAPEEAEGAVGE---------AGSGDGHTTRRARGDGGQSPGDGGGTRRHCFADANDHDDARVLVEVLAARTTAEYVEKAVAVAAPGAVKERVRRALCGGRDGMLRG-----------DGDSVATDWERFLKNAAVSASS 3972
QGL+DKAVATAL DKASGGTLSYYS HL E G R N T + GA Q PS P+T STA + A S P+ E ++ A+ + G+ + VR+GF+SAHFRWHSVGRLT+GLLERL +S L+IFVIDAS GR ST G+ ++ T+ D S G E+ + +RL AAG SIVR+ AAA +A + R S GA ++AL+ A++A+A L+L VLVY DVGMD TTGLAHGRLSPVQVAFWGHPGTTGLSTMDYF+TSDLFEG+LGA G+ R + G SA+ + E+ PD VG E A +G +E RQ +FSEQLVRL GLG +FDDP TFGWD + G + + + S +G R + +Q HS E PP G A SP+ +K++A RPRLYVCAQSLMKMHPAFDAVL GILA DPLAQILLLRDSRQLLWHSRFRRRLRAA+DAAE++ + AA A N TG A SSP+ G W RVRF+SPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG++ AAAN + QG +E H + EAG TT S G PAG AA E G V E G G R G + G G + D H D VLV L AR+T EY+ KAVAVAAPGA+K +VRRAL GR+G+L G DG VA DWERFL NAA SA++
Sbjct: 59 QGLDDKAVATALAAAFDKASGGTLSYYSRHLLLENSRRGGKSRSGDNKGAVTSRGIGAKTQTPSRPKTSSSTADMSVIAGSHPNKVAEVDTPGEDTEAAAGLGAANVGQNIRVVRLGFVSAHFRWHSVGRLTIGLLERLCTSRGLQIFVIDASSGGRHRSTAGKPTATTVQDTSR-----GQPDEDFVLERLAAAGASIVRIQAAAAPSPRNGADATSPTRLAPTTKVEGSSGSGSGGAGSDALQTAREAIAELRLDVLVYGDVGMDAFTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFVTSDLFEGELGAGL-GSRRRLRSNDGGDSSADDDTRYVEQREEAGRNPDGVGDEATAAGGEGDGLEAWAGAERPDRQHAFSEQLVRLGGLGFIFDDPVLTFGWD-SAGEDSGIVPGSNEPSRDSWNGSRNGKHDRGMEDRKQRHS-----ENSPPXXXXXXGRAASSPDLMKKREAEEANRPRLYVCAQSLMKMHPAFDAVLAGILAADPLAQILLLRDSRQLLWHSRFRRRLRAAVDAAEKRA---NFAAVSTGTAAAQNGTGPA---SSPIR---GGLWGRVRFVSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEGLLAAAANTQCQGREEHHPKDHKGEAGALKTTP-SGRNTGGCVGPAGGVQHAAGEAPAGGVAENRRETTTKHPDEGSGGCVPTTRHTPGAAAGTAGASDAAVNTDDEQHMDNNVLVRSLVARSTTEYIAKAVAVAAPGALKRKVRRALRCGRNGLLHGGGRGAGGGDGEDGSDVAADWERFLTNAAASATT 868
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: W4GHX6_9STRA (Glyco_transf_41 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHX6_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.870e-28 Identity = 141/504 (27.98%), Postives = 190/504 (37.70%), Query Frame = 1
Query: 1951 RVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG 3462
+ VGF+S+ FR HSVG+L ++E L E+ V AS + G+ ++PIT + A V+LP+ E AM + L VLVY +VGMD LA RL+ VQ FWGHP TTGLST+DYFI S+ F +DF ++ GG NP + S+SEQLV L F P P V +P SS A+ +PPS R+Y+C Q+LMK+H FDA ++GIL DP I+LL ++Q+LW + RRLR + RV F+ + F +L DV++DPFPFGGGVTTL+ALA G PV+T + Q+V +LA G
Sbjct: 569 KTTVGFVSSWFRTHSVGKLIQRVIESLDRD-RFEVVVFAAS-------------HFFPLKGD--------DDPITTAIERAANRFVQLPSDQEMAM-------------------HVLLREDLDVLVYPEVGMDAWVYFLAGRRLARVQCMFWGHPITTGLSTIDYFIASEYF-------------------------------FSDFYDA---------------GGQPNPH-SDYHMYGGASYSEQLVLFADLSTYF-----------------------------------PPPAAAVPPDPS---SSVRAMLHLPPS---------------------PSRIYLCPQTLMKLHVDFDAAILGILDRDPGGTIVLLYSNKQVLWKDQVHRRLRQST------------------------------------------LGRRVVFIETMPYAMFMQLLAAVDVMVDPFPFGGGVTTLDALAVGLPVITLPSRQTVLQLAAG 883
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A6G0WSC2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSC2_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.030e-27 Identity = 141/510 (27.65%), Postives = 187/510 (36.67%), Query Frame = 1
Query: 1948 KRVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITS-----DLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG 3462
+++++GF+S+ FR HSVG+L G+L+ L S + I VI A R+ D T + +TK + A + +RLP + + AM + V A L VLVY ++GMD+ AH RL+PVQ FWGHP TTGLST+DYFI S D FEG G D SYG S+ EQ+V L F P + A L N FH P GR +Y+C Q+LMKMH FD VL IL D I+ L Q LW R +R A + + + R+ FL + +F +L ADV+LDPFPFGGGVTTL+A A G PV+T + Q+V +LA G
Sbjct: 532 RKIKIGFISSWFRSHSVGKLIKGVLQTLERSKFI-IVVIAAQYFFRA---------------------DHTMDLVTKEIYDAADNFLRLPKSQQRAM-------------------EVVIAEDLDVLVYPEIGMDSWMYFFAHHRLAPVQCVFWGHPITTGLSTIDYFIASEYFFSDFFEGGHGDD----------SYGGM------------------------------------------------SYIEQMVLFSDLSTFFVKPQ--------------IPPIAPLRSN----------------------------------FH------LPMTGR----------IYICPQTLMKMHMDFDNVLRDILTQDTNGYIVALYSVHQALWKERLLQRFDATLGLSLSR---------------------------------------RIIFLQTMPYDQFMQLLSVADVMLDPFPFGGGVTTLDAFALGLPVITLPSRQTVVQLAAG 839
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A485LK40_9STRA (Aste57867_21903 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK40_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.240e-26 Identity = 141/504 (27.98%), Postives = 193/504 (38.29%), Query Frame = 1
Query: 1951 RVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG 3462
R++VGF S+ FR HSVG+L G+L L + ++ V A+ P D ++ ITK + A V LP + A+ +A KL +LV+ ++GMD+ LAH RL+PVQ FWGHP TTGL T+DYFI S+ + FP DF ES + D + GAS + EQ+V L F +P + +P H S +L + FH P +GR LYVC Q+LMK+H FDAV+ +L D +LL +Q+LW R RR ++ GP RV FL ++ F +L ADV+LDPFPFGGGVTTL+ALA G PV+T + Q+V +L G
Sbjct: 533 RIKVGFASSWFRTHSVGKLIRGVLSSLDRN-KFDVIVYAAT---------HFFPPPSD------------DDAITKAIRDASDEFVVLPPSQPMAL-------------------DLIARAKLDILVFPEIGMDSWIYFLAHHRLAPVQCMFWGHPITTGLPTIDYFIASEYY---------------------FP----------DFFES---------GTPIMDDQVSTYGGAS--------YKEQMVLFSDLTTYFTEPVK-------------------------------LP----------HVSDPVSLRAL---FH------LPLKGR----------LYVCPQTLMKLHVDFDAVIRRVLERDGGGIFVLLYSPKQVLWKERLVRRFNTSL------------------------------GPH---------VTRRVVFLETMAYDMFMQLLASADVMLDPFPFGGGVTTLDALAVGLPVITLPSRQTVVQLTAG 848
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A1V9Z1P9_9STRA (Uncharacterized protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1P9_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.600e-25 Identity = 140/513 (27.29%), Postives = 180/513 (35.09%), Query Frame = 1
Query: 1951 RVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENP---ITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKL------GVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEG 3462
R RVGF+S+ FR HSVG+L G++ L S +LE+ V T H F P IT + + V LPA VAAL+L V+V+ ++GMD LA R++ VQ FWGHP TTGL ++DYF+ SDL+ G L AD +SEQLVR L + P+ LSR+R R H +P S H +Y+C Q+LMK+H FD LV IL DP + I+LL Q+LW R R RL+A E R+ F+ F +L ADV+LDPFPFGGGVTTL+ALA G PVVT + Q+V LA G
Sbjct: 505 RKRVGFVSSWFRSHSVGKLMRGVIAHLDRS-ALEVIVF---------------ATSH----------FFAVTPTDAITAEIQTSADRFVVLPA-------------------------NQVAALELLELEGLDVVVFPEIGMDAWMYFLARHRVARVQCVFWGHPITTGLPSVDYFVASDLYVGDLAADE---------------------------------------------------------------YSEQLVRFSSLSFYYHKPS-----------------LPPLSRDR-----------------RAFH--------LPESAH----------------------IYICPQTLMKLHVTFDDALVRILEADPRSYIVLLYSPSQILWKHRVRDRLKARTPTNE-----------------------------------------RIIFVEAQPYEGFMQLLSVADVMLDPFPFGGGVTTLDALAIGLPVVTLPSRQTVVELAAG 798
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A024TB82_9STRA (Glyco_transf_41 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB82_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.170e-24 Identity = 130/491 (26.48%), Postives = 188/491 (38.29%), Query Frame = 1
Query: 1936 DTGKKRVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACG 3408
DT + +++VGF+S+ FR HSVG+L ++E + + + V+ A+ T S+ T + IT+ + A + V LPA+ + AM + L+ A L VLVY ++GMD LAH RL+P+Q FWGHP TTGL ++DYFI S+ F DF ES R + GG T ++EQLV L F P P ++ S ATL H +SG R+Y+C Q+LMK+H AFD ++G+L D ++LL +QLLW + RRL + +++ RV F++ L +F +L ADV++DPFPFGGGVTTL+A A G
Sbjct: 538 DTRQTKIKVGFVSSWFRVHSVGKLIQRVIETIDRN-QFHVVVLAATHFFPHDTVATSTTT----------------DAITRAIQEAADAFVVLPASQDMAM-----------HMILQEA--------LDVLVYPEIGMDAWMYFLAHRRLAPIQCMFWGHPITTGLPSIDYFIASEFFFA-------------------------------DFFESNDGR-----RMDEMHGGAT--------------YTEQLVLFSDLSTYFSKPRAL----PPVDDAVAASMRATL-----------------------HLPASG-------------------------------RIYLCPQTLMKLHVAFDQAILGLLKLDTDGHVVLLYSPKQLLWKDKVHRRLGRTLG---NRLVR------------------------------------RVLFVATLPHDKFMQLLAIADVMIDPFPFGGGVTTLDAFAAG 845
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A5D6XK91_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK91_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.650e-24 Identity = 132/496 (26.61%), Postives = 189/496 (38.10%), Query Frame = 1
Query: 1951 RVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGG-----ASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWS--RVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPV 3417
R RV F+S FR HSVG+L +G+++RL + + V +H + +G + +T A V LPA+ E+A+ R ++ V ++ ++GMD T L+H R++ VQ FWGHP TTG +DYFI+S F + G G GA +++ G+T FSEQ+V GL F R + + +A L + SH G V + P+ H+ A P+ G + + + R Q+LMK+HPAFDAVL GIL DPLA ++LL Q +W + R R R ++ G F + RV F+ L EF L ADV+LDP+PFGGGVT L+ALA G V
Sbjct: 436 RRRVVFISTWFRNHSVGKLLLGVVQRLDRA-KFRVLVFRC---------------VHFL--REG-------DELTAAFRRAADRFVDLPASREDALVLLRQE-------------------EIDVAMFPELGMDAWTLALSHQRVARVQCVFWGHPVTTGNPAIDYFISSAYFVSDDASSTGGAG-------------------------------GAVEQSLAKHHGST--------------FSEQVVLFRGLSKFFTRVRRGYVVEG--------VGSAPLESHSSHQGWRTVHAANASEAPQTAHAEHAAAAGESPALCLPSGTLLLPLSLSAWSFVDEKLSCRGACVAVNQTLMKLHPAFDAVLAGILRRDPLAYVVLLAAEAQSVWKEQPRARFRRSL----------------------------------------GGFANARRVLFMPTLPYAEFMALLSFADVILDPYPFGGGVTALDALALGVYV 794
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A4P7YWZ0_9PROT (Uncharacterized protein n=2 Tax=Azospirillum sp. TSA2s TaxID=709810 RepID=A0A4P7YWZ0_9PROT) HSP 1 Score: 114 bits (284), Expect = 5.470e-22 Identity = 123/494 (24.90%), Postives = 169/494 (34.21%), Query Frame = 1
Query: 1948 KRVRVGFLSAHFRWHSVGRLTVGLLERLGSSCSLEIFVIDASIDGRSSTPGQSSPTLHDISGEQGGGGDFTENPITKRLNAAGVSIVRLPAAAEEAMAEPRPNSSGASNNALENAQKAVAALKLGVLVYADVGMDTLTTGLAHGRLSPVQVAFWGHPGTTGLSTMDYFITSDLFEGQLGADRNGTGANDRGSYGSFPSANPNGLGTNDFIESIPDEVGAEDRAEVADGGNTNPPGASETSVRQDSFSEQLVRLDGLGIVFDDPTRTFGWDPNCGNSNDLSAAATLSRNRSHDGREPVPGKRVAGEPRQHHSSSGALELVPPSFHDCDGGASPEEGRKKDAATGRPRLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLL--RDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVT 3423
+R+R+GF+S HF H++G L GL+ERL S E+ + TPG E+ + + L A + +PA LE A++ +A +L +L Y D+GM T LA RL+P+Q WGHP TTG+ T+D F++ D E + G + +SE+LVRL G + + P V EPR+ S+ G P EG LY+C QSL K+HP +D VLV IL DP + + R+ Q L L+P+ D R+R L L +F L ADV+LDPF + GG TTLEALA GTPVVT
Sbjct: 288 RRLRIGFVSDHFHAHTIGMLNQGLVERL-SRDRFEVVLFF--------TPGP-------------------EDDLRRHLKAVADQAIDVPAT-------------------LEEARRIIADARLDILYYTDIGMSPFTYFLAFARLAPLQCLSWGHPDTTGIPTLDLFLSCDAMEPEDG---------------------------------------------------------------EAQYSERLVRLPGPTVHYRRP--------------------------------------VLPEPRKTRSAFGL----------------PSEGT----------LYLCPQSLFKLHPDYDPVLVDILRRDPGGTLAFVDPREQGQALLER---------------------------------------------LAPKGPDVAGRIRLLPGLGAMDFLALTADADVMLDPFHYSGGKTTLEALAFGTPVVT 562
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Match: A0A8K1CN62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CN62_PYTOL) HSP 1 Score: 113 bits (283), Expect = 1.480e-21 Identity = 69/162 (42.59%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 2983 RLYVCAQSLMKMHPAFDAVLVGILATDPLAQILLLRDSRQLLWHSRFRRRLRAAIDAAERKVIEPSAAAFDISAAETVNATGGADGPSSPLSPQPGDFWSRVRFLSPLSGREFFRLQCRADVVLDPFPFGGGVTTLEALACGTPVVTAGALQSVHRLAEGMI 3468
RLYVC Q+LMK+HPAFD VL GIL DP A I+LL Q++W + RRR R + G R+ F S L +EF L ADV+LDPFPFGGGVTTL+ALA GTPVVT + Q+V +LA G +
Sbjct: 779 RLYVCPQTLMKLHPAFDEVLSGILTKDPKALIILLSSPSQVVWKEKLRRRFRQSF----------------------------------------GKAHHRILFFSTLPYQEFMGLLSLADVILDPFPFGGGVTTLDALAVGTPVVTQPSAQTVMQLAAGFL 900 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1079.1054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1079.1054.1 >prot_S-firma_F_contig1079.1054.1 ID=prot_S-firma_F_contig1079.1054.1|Name=mRNA_S-firma_F_contig1079.1054.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1268bp MIFSGANPVYQAEGDILTIREEEEEWVWLHAANKLPRDAPSLTVLTVRDTback to top mRNA from alignment at S-firma_F_contig1079:13314..19388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1079.1054.1 ID=mRNA_S-firma_F_contig1079.1054.1|Name=mRNA_S-firma_F_contig1079.1054.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6075bp|location=Sequence derived from alignment at S-firma_F_contig1079:13314..19388+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1079:13314..19388+ >mRNA_S-firma_F_contig1079.1054.1 ID=mRNA_S-firma_F_contig1079.1054.1|Name=mRNA_S-firma_F_contig1079.1054.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=7608bp|location=Sequence derived from alignment at S-firma_F_contig1079:13314..19388+ (Sphaerotrichia firma ET2_F female)back to top |