mRNA_S-firma_F_contig10714.967.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A8J8NT95_HALGN (Ion_trans_2 domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NT95_HALGN) HSP 1 Score: 110 bits (274), Expect = 1.020e-24 Identity = 74/242 (30.58%), Postives = 127/242 (52.48%), Query Frame = 1
Query: 19 QFLKARGSLDLRENLYTSGKLTLLVVELVICLPHPLPFVDKSFDIDDPVVESGLYAPVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQGVWAY 744
++ K+RG L ENL ++G L++E+ I + PLP++D F + V+ YT + +L ++ML R Y+ A+ F S ++ + + N + F K++M + P + + L+VT+ GY +R+FE P+ + Y N+MW V+VT+STVGYG++ + T GR V ++ CF G V++ FV VT M F E +++ L R K + + A V+ + +
Sbjct: 2 EWFKSRGLLTEFENLQSTGWYKQLLIEIGIVVIAPLPYLD-DFKYQE-YVDMFKADIQYTYNEILLSFMLFRCYIFVRYSLVASQFMSPRSKRICNINGCEANLMFAMKSIMKQRPYLAILIALLVTIFLFGYQLRLFEGPISAASGQDFNSYN-NAMWNVIVTLSTVGYGELYMKTFFGRVVGLIVCFWGTFVVSYFVVTVTNMLTFAAPEEKSYTLLLRLHYKEDLKKYAVNVLTSAFKH 240
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A7S0XUR2_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0XUR2_HEMAN) HSP 1 Score: 111 bits (277), Expect = 1.140e-24 Identity = 84/226 (37.17%), Postives = 115/226 (50.88%), Query Frame = 1
Query: 70 SGKLTLLVVELVICLPHPLPFVDKSFDIDDPVVESGL--YAPVYTLDALLSAWMLLRLYL-AASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQGVW 738
SG L + E I L HPLPFV+ I GL Y Y+ DA +S +MLLRLY + + +G + R++ NNV S F KAM+ R L L + VV+V + Y M VFE P+ L F NS+W +++TM+TVGYGD T GR VA+ A + VV++AL V VT T DE + + K E++ AAR++Q W
Sbjct: 127 SGLLWPFITEACIILVHPLPFVNYIVHI------WGLDTYC-AYSSDAFVSVFMLLRLYYYTPRIIAEVSGLKNEKTRLIGLMNNVDLSYHFILKAML-RDSLLTLLFLFVVSVITMSYAMIVFERPVGPDTNLDL---FENSVWLIIITMTTVGYGDTYPKTPSGRYVAIFAALLAVVLVALAVGAVTDRLTLTRDESKVLEFIDNIRNKQERKVAAARMLQNGW 341
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: L1J3M7_GUITC (Ion_trans_2 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J3M7_GUITC) HSP 1 Score: 107 bits (268), Expect = 1.820e-23 Identity = 81/226 (35.84%), Postives = 116/226 (51.33%), Query Frame = 1
Query: 70 SGKLTLLVVELVICLPHPLPFVDKSFDIDDPVVESGL--YAPVYTLDALLSAWMLLRLY-LAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQGVW 738
SG L ++E I L HPLPFV+ I GL Y Y+ D ++ +M+LRLY + +A+G + R++ NNV S F KAM+ R L L + +V+V L Y VFE P+ L F NS+W V++TM+TVGYGDI T GR VA+ A + VV++AL V VT + DE + + K E++ AA+++Q W
Sbjct: 114 SGLLRPFLIETAIILIHPLPFVNYIVHI------WGLDTYC-AYSSDGFVTVFMMLRLYHYTPRIIAEASGLRNEKTRLIGLMNNVDISYHFIGKAML-RDSLLTLLFLFIVSVVTLAYATIVFERPIGPDTNLDL---FENSVWLVIITMTTVGYGDIYPKTPMGRYVAIFAALLAVVLVALAVGAVTDRLTLSRDESKVLEFIENIRSKQERKSAAAQMLQHAW 328
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A7S1XKF7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKF7_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.830e-22 Identity = 66/202 (32.67%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 187 PVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVA--------HWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLP-------------QYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQ 729
P Y+L++L + M LRL V H G H S++++ HW SFT K M+ +HP + +A ++ + Y +R+FE + C+ PP+ + F N+ W V++TMSTVG+GD+ T+GGR A+ AC MGVV+IALFV+ +T T E +A+ + + KL+ +A ++Q
Sbjct: 118 PHYSLESLTAPLMTLRLLFCLPVLHQVVGSHGVSSKLLEKVTATKLDHW-------SFTMKVMLKQHPFKFVACVMCFFIVQSAYCIRIFERAI--CIEPPIEIEDLCGQKSIFSYESFGNTFWNVLITMSTVGFGDMFPRTAGGRLFAIYACIMGVVMIALFVSVITDKITMTAKETKAYALMKQNELKLKAADTSATLLQ 310
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A7S1TRS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRS2_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.230e-21 Identity = 66/202 (32.67%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 187 PVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVA--------HWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLP-------------QYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQ 729
P Y+L++L + M LRL V H G H S++++ HW SFT K M+ +HP + +A ++ + Y +R+FE + C+ PP+ + F N+ W V++TMSTVG+GD+ T+GGR A+ AC MGVV+IALFV+ +T T E +A+ + + KL+ +A ++Q
Sbjct: 238 PHYSLESLTAPLMTLRLLFCLPVLHQVVGSHGVSSKLLEKVTATKLDHW-------SFTMKVMLKQHPFKFVACVMCFFIVQSAYCIRIFERAI--CIEPPIEIEDLCGQKSIFSYESFGNTFWNVLITMSTVGFGDMFPRTAGGRLFAIYACIMGVVMIALFVSVITDKITMTAKETKAYALMKQNELKLKAADTSATLLQ 430
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: I7MMQ2_TETTS (Small-conductance calcium-activated potassium channel protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MMQ2_TETTS) HSP 1 Score: 103 bits (256), Expect = 1.830e-21 Identity = 73/241 (30.29%), Postives = 127/241 (52.70%), Query Frame = 1
Query: 19 QFLKARGSLDLRENLYTSGKLTLLVVELVICLPHPLPF---VDKSFDIDDPVVESGLYA--PVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPL-RSCLTPPLPQY-FLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAAR 720
++LK R ++ + NL TSG L +++E++I HP+P+ V SF +DP + Y ++ L LL +++R L SV+++ + + V + V FT K +M+ P L+ L++++ G+++R+ EAPL R+ L Y F NS+W ++VTM+T+GYGD TS GR + + C GV ++++ V ++ T E ++ L R K ++ AAR
Sbjct: 203 EWLKTRQAISQKANLITSGYLKSMIIEIIISAVHPMPWTWQVRLSF-FNDPTQATAYYHLNEIFLLIMLLRVLLIVRTLLTCSVWYN------NRTQRVCNMYAVEVDYLFTVKGIMETQPYALIISALIISILYFGFMIRICEAPLYRNQTDGQLLLYSFSNSLWVMLVTMTTLGYGDYCAKTSLGRFITFLVCIWGVFIVSMMVITLSKTLELTTLEEKSIAVLQRLRYKELMKNHAAR 436
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A078A3V8_STYLE (Small-conductance calcium-activated potassium channel protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A3V8_STYLE) HSP 1 Score: 101 bits (251), Expect = 7.680e-21 Identity = 69/234 (29.49%), Postives = 119/234 (50.85%), Query Frame = 1
Query: 28 KARGSLDLRENLYTSGKLTLLVVELVICLPHPLPFV-DKSFDIDDPVVESGLYAPVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVI 726
K+RG L + L+ +G L EL I + P PF+ D ++ +P + + Y ++ LL + LR+Y+ A F + + V N F K++M + P +L + ++++ Y +++FEAP+ ++ Q F+N MW V+VTM T+GYGDI T GR + ++ CF GV ++++FV + M F+ +E +A+ L R K E + A V+
Sbjct: 212 KSRGLLTEYDTLWNTGNWQSLGCELFIVIIAPYPFLYDIKYEEYNPQFSTYI---TYDVNDLLLTFSFLRIYILARFTMVKTQFMNPRSLRVCLMNGCQADVFFAVKSIMKQRPYTVLGISMIISTVIFSYQLKIFEAPMSE-ISGQNFQSFINCMWCVMVTMGTIGYGDIYPKTVMGRIIGMIVCFWGVFIVSIFVVTLNNMLTFSANEEKAYNLLQRLYYKGELKRKATLVL 441
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A8J8NWB3_HALGN (Ion_trans_2 domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NWB3_HALGN) HSP 1 Score: 100 bits (250), Expect = 1.150e-20 Identity = 80/257 (31.13%), Postives = 126/257 (49.03%), Query Frame = 1
Query: 19 QFLKARGSLD-LRENLYTSGKLTLLVVELVICLPHPLPFVDKSFDIDDPVVESGLYAPVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTF--KAMMDRHPLRLLAVILVVTVAGLGYLMRVFE---------APLRSCLTPPLPQ---YFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVIQGVWAY 744
++ KA+GS D L++ S + +++ I L HP+P + F V+++ Y Y+L A+LS + LR YL V + + + + F P+F F KA M + P + + V ++ G+ +R FE A R + L Q Y NS W +VVTMS+VGYGD +T GR V V+A F G+V+++ F+ + S FTP + +A+ L R + E + AA +IQ W Y
Sbjct: 192 KYHKAKGSYDDLKKRFRESTQFKTMMITNFINLLHPIPMFEYQF-----VMKTLNYPVRYSLSAVLSNLLFLRFYLLIRVIVQCSKWTDVESESIC--EKEGFRPNFLFSLKAWMKQRPFLSILINFVCSMLAFGFAVRTFERSFYEDREYANFRE--SDQLYQNYNYVWNSFWLIVVTMSSVGYGDFYPITHLGRFVVVIASFWGMVMVSQFIYTMEVQSNFTPAQSKAYELLQRLEKRKELREDAALLIQAWWIY 439
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: A0A1R2B038_9CILI (Ion_trans_2 domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B038_9CILI) HSP 1 Score: 97.8 bits (242), Expect = 7.450e-20 Identity = 72/238 (30.25%), Postives = 126/238 (52.94%), Query Frame = 1
Query: 10 HCP-QFLKARGSLDLRENLYTSGKLTLLVVELVICLPHPL-PFVDKSFDIDDPVVESGLYAPVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAA 717
HC ++ K RG +N+ +SGKL L++EL+I HP+ P + F + V + + Y + LL+ +LR+Y +++ + + + + + N ++ K +M+ PL+++ ++V+ + G+ +R+FE PL Y+ N+MW V++TM+TVGYGD T GR V ++ C GV+V+++ V VT M + DE +A L+LYR E+ AA
Sbjct: 114 HCILEWEKGRGLYSSFDNIQSSGKLKTLILELIINFLHPIWPLRNVHFLSFNTVFKVYIK---YAYNDLLTICTILRIYHIINLYSVFSKYRTERSFRICKMNGNFAGTTWAVKCLMNDDPLKVVIALMVIGILIGGFCLRIFERPLNVYSELDF-SYYGNTMWCVLLTMTTVGYGDYYPSTLPGRIVGLIICIWGVLVVSIMVLTVTNMLKLSSDEIKA-LSLYRRLNFREELRDAA 346
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Match: J9IQR6_9SPIT (Small-conductance calcium-activated potassium channel protein n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IQR6_9SPIT) HSP 1 Score: 96.3 bits (238), Expect = 4.110e-19 Identity = 62/232 (26.72%), Postives = 117/232 (50.43%), Query Frame = 1
Query: 31 ARGSLDLRENLYTSGKLTLLVVELVICLPHPLPFVDKSFDIDDPVVESGLYAPVYTLDALLSAWMLLRLYLAASVFHDAAGFHSHSARVVAHWNNVSFSPSFTFKAMMDRHPLRLLAVILVVTVAGLGYLMRVFEAPLRSCLTPPLPQYFLNSMWFVVVTMSTVGYGDITVVTSGGRCVAVMACFMGVVVIALFVTGVTAMSAFTPDERRAFLALYRTTGKLEQQHMAARVI 726
++G + L T+G++ ++ E+ + +P F ++ +E Y V L+ L++ + L + F + F+ A+ V N + FT K+++ +P L++ + + T+ Y ++VFE P + TP + + N++W +VVTM+T+GYGD+ T GGR V ++ C G+ + + F +T +FTP E +A+L L R K + Q + R +
Sbjct: 183 SKGYFTRIDTLTTTGQIKYVLFEMFLISLNPYEFFQNENFLNYSTMEH--YYVVSNLNELMTVFCLFKSGFFLRSFMYFSRFNGPRAQRVCQMNGCKATTIFTIKSIIQENPYSLISFLFIFTLFTSAYALQVFERPFVNN-TPQDYESYWNALWNIVVTMATIGYGDLYPKTFGGRIVGIIICIWGIFIGSFFTVTLTNFLSFTPSENKAYLLLQRLYWKEKIQQESVRAV 411 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10714.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10714.967.1 >prot_S-firma_F_contig10714.967.1 ID=prot_S-firma_F_contig10714.967.1|Name=mRNA_S-firma_F_contig10714.967.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=248bp MTPHCPQFLKARGSLDLRENLYTSGKLTLLVVELVICLPHPLPFVDKSFDback to top mRNA from alignment at S-firma_F_contig10714:2185..3081- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10714.967.1 ID=mRNA_S-firma_F_contig10714.967.1|Name=mRNA_S-firma_F_contig10714.967.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=897bp|location=Sequence derived from alignment at S-firma_F_contig10714:2185..3081- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10714:2185..3081- >mRNA_S-firma_F_contig10714.967.1 ID=mRNA_S-firma_F_contig10714.967.1|Name=mRNA_S-firma_F_contig10714.967.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1488bp|location=Sequence derived from alignment at S-firma_F_contig10714:2185..3081- (Sphaerotrichia firma ET2_F female)back to top |