mRNA_S-firma_F_contig1065.881.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI) HSP 1 Score: 541 bits (1393), Expect = 3.500e-188 Identity = 274/337 (81.31%), Postives = 293/337 (86.94%), Query Frame = 1
Query: 31 MREENGENAKVGNGDSEENGRRIHSSPAACYGSALISSKIPPRCRGKREAGADPGGGEGELEGGGGVILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAAGMKSITSFMVQPKKKARANLFVKRGLELVDTF 1041
M E N +++ G + +EN RR SP AC+GSALISSKIPPRCRG L+G GGVILGIDEAGRGPVLGPMTYGAAYWSCADD+++SA GFDDSKALT DQRT LFDRID TP+VGWVLRLISARELSDKMCRKVPYSLNVISHDAAAE+IRAVQARGVKVTQVYVDTVGDP YQ+KLEKEFGK +KFVVAKKADSLYKT SAASIVAKVTRDRI+E W+WSEPNLDFSEDR YGSGYPGDE+CKKWLE+NVD VFGFPDICRFSWGTTKE+LKG KRVDWEEEPDEEAAGM SI SFMVQPKKKARANLFVKRGLELVDTF
Sbjct: 1 MPEGNVQHSNDGGEEPKENARR---SPTACFGSALISSKIPPRCRG--------------LDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEFGKGIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSEDRKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSWGTTKEILKGPTRKRVDWEEEPDEEAAGMNSIASFMVQPKKKARANLFVKRGLELVDTF 320
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK) HSP 1 Score: 312 bits (799), Expect = 9.330e-99 Identity = 171/306 (55.88%), Postives = 211/306 (68.95%), Query Frame = 1
Query: 133 LISSKIPPRCRGKREAGADPGGGEGELEGGGGVILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTT-KELLKGCAGKRVDWEEEPDEEAAGMKSITSFMVQP--KKKARANLFVKRGLELVDTF 1041
L S +P CR +G G + G ILGIDEAGRGPV+GPM YGAAYWS ADD+++SAMGFDDSKALT DQR LFD+I TP VGWV+R ISA E+S++M RKVP SLN+IS+ AA +MI+ GV +T+VYVDTVGDP YQ +L + F + F VAKKADSLYKTVSAASI AKVTRDR++E W + E F+ GSGYP DE+C WL +VD VFGFP+I RFSWG +E+L+ A RV+W+E+ + GM+SI F+ QP KK+ RA F +RGLE+V F
Sbjct: 10 LFKSPVPESCRTVLASG-------GFADKGPECILGIDEAGRGPVMGPMVYGAAYWSKADDEEISAMGFDDSKALTADQRASLFDKIKETPSVGWVIRSISAEEISNQMLRKVPVSLNIISYAAAMQMIQTALDDGVNITKVYVDTVGDPAAYQERLTRHFKGAIDFTVAKKADSLYKTVSAASICAKVTRDRLLEGWVFPEGPAGFAGGAAMGSGYPSDEKCVAWLRAHVDPVFGFPNIVRFSWGGAGREILEEKAA-RVEWDED-EGPPPGMQSIAGFL-QPANKKRRRAKYFHQRGLEVVHDF 305
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A835YL34_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL34_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.020e-88 Identity = 148/279 (53.05%), Postives = 188/279 (67.38%), Query Frame = 1
Query: 235 LGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSED---RGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAAG-------MKSITSFMVQPKKKARANLFVKRGLELVDTF 1041
+GIDEAGRGPVLGPMTYGAAYWS DD+ + +G+DDSKAL+ D+R L+ I A ++GWVLR++ ARELS +M R+ P+SLN ISH AAAEMIR R V +T VYVDTVGDP Y L +EF + F VAKKADSLYKTVSAASI AKV RDR + +WR+ EP + F+ D R YGSGYPGD RC WL ++VD++FGFPD+ RFSW T ++LL+ A K V+WEEE + + G + +F + + R F + +E F
Sbjct: 1 MGIDEAGRGPVLGPMTYGAAYWSMNDDEAIKKLGYDDSKALSEDKREKLYKGIMAEQRIGWVLRVLGARELSARMLRRAPHSLNAISHAAAAEMIRHALGRAVALTHVYVDTVGDPDNYARALRREFP-GIGFTVAKKADSLYKTVSAASICAKVVRDRALARWRYREPGV-FAGDAAARAYGSGYPGDARCSAWLRSHVDTIFGFPDVARFSWSTARDLLEAAAAK-VEWEEEEEGDVQGGFGGPQGAPKLDAFFTRSGQAPRTQYFKRARIERTYAF 276
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A5D6XNI5_9STRA (Ribonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNI5_9STRA) HSP 1 Score: 283 bits (725), Expect = 1.150e-87 Identity = 155/279 (55.56%), Postives = 194/279 (69.53%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDW--EEEPDEEAA--GMKSITSFMVQPKKKA----RANLFVKRGLELVDTF 1041
V+LGIDEAGRGPVLGPM YGAA+W A D +SAMGFDDSKAL+ + R LF ++ AT Q+GWV+RLISA+E+SDKM R+ +LN +S +AA +MIRA QA+GV VT VYVDTVGDP YQ L K+F ++F V KKADSL+K VSAASI AKVTRDR I +W+W P LD +D +GSGYP D R K WL N++ +F FP+I RFSWGT + L +V+W E+E D+ +A G +SITSF+ PKK R + F R L+ V F
Sbjct: 35 VMLGIDEAGRGPVLGPMVYGAAFWPVAQDAKLSAMGFDDSKALSAETREQLFAKMRATDQLGWVVRLISAQEISDKMQRQTS-NLNEMSRNAAIQMIRATQAKGVNVTHVYVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRAISEWKWEAPALDLPKD--FGSGYPSDPRTKTWLVDNLEPLFAFPNIVRFSWGTVEPFLAKAV--KVEWPHEKELDKASAPAGTQSITSFLQAPKKAPSAAKRTSFFADRKLQDVTDF 308
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: K3WMP3_GLOUD (Ribonuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP3_GLOUD) HSP 1 Score: 277 bits (709), Expect = 2.760e-85 Identity = 146/281 (51.96%), Postives = 191/281 (67.97%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAA----GMKSITSFMVQPKKKA------RANLFVKRGLELVDTF 1041
V+LGIDEAGRGPV+GPM YGAA+W A + ++SA+GFDDSKAL+ + R GLF+++ A ++GW++R+ISA+E+SDKM R+ +LN +S DAA +MIR QA+GV V QV+VDTVGDP YQ L K+F ++F V KKADSL+K VSAASI AKVTRDRII W W P L+ +D +GSGYP D + K WL ++D +FGFP+I RFSWGT + L +V+W + + E A G +SITSF+ PKK R F R L+ V F
Sbjct: 33 VMLGIDEAGRGPVMGPMVYGAAFWPVAQNDEMSALGFDDSKALSAESREGLFEKMKANKELGWIVRMISAQEISDKMQRQTS-NLNEMSRDAAIQMIRETQAKGVNVKQVFVDTVGDPKWYQTFLTKQFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRIIVDWEWEAPALNLRKD--FGSGYPSDPKTKAWLSEHMDDLFGFPNIVRFSWGTIEPFLLKAV--KVEWPHDKELEKANTPTGTQSITSFLQAPKKDKTQPAAKRPRFFADRKLQDVTDF 308
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A6A3Y691_9STRA (Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y691_9STRA) HSP 1 Score: 277 bits (708), Expect = 3.100e-85 Identity = 147/281 (52.31%), Postives = 191/281 (67.97%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAA----GMKSITSFMVQPKKKA------RANLFVKRGLELVDTF 1041
VILGIDEAGRGPV+GPM YGAAYW AD++ + A+GFDDSKAL+ + R LF+++ +T +GW++RLISA E+SDKM R+ +LN IS DAA ++I VQ +G V +V+VDTVGDP YQ+ L K F ++F V KKADSL+K VSAASI AKVTRDR+I W+W P LD D +GSGYP D + K WL T++D VF FP+I RFSWGT + + +V+W + + E A G +SITSF+ +P KKA RA F +R L+ V F
Sbjct: 26 VILGIDEAGRGPVMGPMVYGAAYWPVADNEAMCALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAVEISDKMQRQTS-NLNEISRDAAIQLINEVQKKGTVVKKVFVDTVGDPRWYQSFLTKHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVISDWKWESPALDLPTD--FGSGYPSDPKTKAWLATHMDQVFVFPNIIRFSWGTVEPFFEKAV--KVEWPHDKELEKASAPAGTQSITSFLAKPAKKAKTSTSARAAFFTQRRLQDVTDF 301
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: W7TUP4_9STRA (Ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP4_9STRA) HSP 1 Score: 276 bits (705), Expect = 3.750e-84 Identity = 162/286 (56.64%), Postives = 189/286 (66.08%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDAT-PQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKE---VKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSE--DRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELL-KGCAGKRVDWEEEPDEEA--AGMKSITSFMVQPK----KKAR--ANLFVKRGLELVDTF 1041
V LGIDEAGRGPVLGPM Y AA+W +D + AMGFDDSKAL R GLF R+ T QVGWV+ I A E++ KM + P SLN ISHD+AA+M+ V A GV VT+V+VDTVGDP YQ KLE FG + F VAKKADSLYKTVSAASI AKVTRDR I W W E DF + +GSGYPGD RC +WL N + VFGFP + RFSW TT+EL+ K C G V+WEEE + AG SI +F V+PK KKAR A F +RG+E V F
Sbjct: 68 VKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEE---DFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVG--VEWEEEEENGGLPAGTASIEAF-VKPKADGPKKARKRAKYFQQRGMETVGDF 347
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A067C1L6_SAPPC (Ribonuclease n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1L6_SAPPC) HSP 1 Score: 273 bits (699), Expect = 3.890e-84 Identity = 148/268 (55.22%), Postives = 181/268 (67.54%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAAGMKSITSFMVQP-KKKARANLFVKRGLEL 1029
V+LGIDEAGRGP+LGPM YGAAYW + D + AMGFDDSKAL+ D RT LF +I AT VG+V R ISA E+S M + +LN +S DAA EMI AVQ GV++T VYVDTVGDPG YQ+ L K FG + F V KKADSLYK VSAASI AKVTRD + +W W +L D YGSGYP D + K+WL +V+ VFG+P+I RFSWGT + L A V+W + ++ AG +SI SFM P KK+ R FV+ LE+
Sbjct: 18 VMLGIDEAGRGPILGPMVYGAAYWPVSLDSTMRAMGFDDSKALSHDSRTQLFAKIKATADVGYVTRSISAAEISHNMLTR-RRNLNEMSRDAAIEMILAVQKAGVRLTHVYVDTVGDPGWYQSFLTKRFGGAITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWTWEHASLKLPID--YGSGYPSDPKTKQWLAAHVERVFGYPNILRFSWGTLESYLDRMAA--VEWPHDKEDAPAGTQSIKSFMQTPTKKRKRTPYFVQNHLEV 280
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: W2JEM4_PHYPR (Ribonuclease n=16 Tax=Phytophthora TaxID=4783 RepID=W2JEM4_PHYPR) HSP 1 Score: 274 bits (700), Expect = 4.800e-84 Identity = 145/279 (51.97%), Postives = 189/279 (67.74%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAA----GMKSITSFMVQPKKKA----RANLFVKRGLELVDTF 1041
V+LGIDEAGRGPV+GPM YGAAYW AD+ +SA+GFDDSKAL+ + R LF+++ +T +GW++RLISA E+SDKM R+ +LN +S DAA ++I VQ +G V +V+VDTVGDP YQ L K F ++F V KKADSL+K VSAASI AKVTRDR+I W W P L+ D +GSGYP D + K WL T+VD VF FP+I RFSWGT + ++ +V+W D E A G +SITSF+ +P +KA RA F +R ++ V F
Sbjct: 28 VMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAAEISDKMQRQTS-NLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLTKHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPALELPTD--FGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEKAV--KVEWPHGKDLEKANAPTGTQSITSFLAKPVQKAKPATRAAFFTQRNMQDVTDF 301
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Match: A0A485KLJ7_9STRA (Ribonuclease n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLJ7_9STRA) HSP 1 Score: 267 bits (683), Expect = 1.060e-81 Identity = 143/273 (52.38%), Postives = 182/273 (66.67%), Query Frame = 1
Query: 229 VILGIDEAGRGPVLGPMTYGAAYWSCADDQDVSAMGFDDSKALTPDQRTGLFDRIDATPQVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAEMIRAVQARGVKVTQVYVDTVGDPGMYQAKLEKEFGKEVKFVVAKKADSLYKTVSAASIVAKVTRDRIIEKWRWSEPNLDFSEDRGYGSGYPGDERCKKWLETNVDSVFGFPDICRFSWGTTKELLKGCAGKRVDWEEEPDEEAAGMKSITSFMVQ----PKKKARANLFVKRGLELVD 1035
V+LGIDEAGRGP+LGPM YGAAYW D++ +SA GFDDSKAL+ + R LF +I AT +G+V R I A E+S M + +LN +S DAA EMI AVQ RGV+V VYVDTVGDPG Y+ L K F + F V KKADSL+K VSAASI AKVTRD + +W + P LD S YGSGYP D +CK+WL N++ VFG+P+I RFSWGT + + +VDW + ++ AG +SI SFM PKK+ R+ F +R L++V
Sbjct: 18 VMLGIDEAGRGPILGPMVYGAAYWRVKDNETMSAQGFDDSKALSHESRERLFAKIKATADMGYVTRSIPASEISHNMLTR-RRNLNEMSRDAAIEMICAVQKRGVRVAHVYVDTVGDPGWYKNFLTKHFHGTIVFTVEKKADSLFKVVSAASICAKVTRDAAVAQWTYEGPGLD-SLPTDYGSGYPSDPKCKQWLADNLEPVFGYPNIVRFSWGTLESYVDRLV--KVDWPHDKEDAPAGTQSIMSFMAPSASAPKKRKRSAFFTQRHLDIVS 286 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1065.881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1065.881.1 >prot_S-firma_F_contig1065.881.1 ID=prot_S-firma_F_contig1065.881.1|Name=mRNA_S-firma_F_contig1065.881.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=338bp MREENGENAKVGNGDSEENGRRIHSSPAACYGSALISSKIPPRCRGKREAback to top mRNA from alignment at S-firma_F_contig1065:4540..9084- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1065.881.1 ID=mRNA_S-firma_F_contig1065.881.1|Name=mRNA_S-firma_F_contig1065.881.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4545bp|location=Sequence derived from alignment at S-firma_F_contig1065:4540..9084- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1065:4540..9084- >mRNA_S-firma_F_contig1065.881.1 ID=mRNA_S-firma_F_contig1065.881.1|Name=mRNA_S-firma_F_contig1065.881.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2028bp|location=Sequence derived from alignment at S-firma_F_contig1065:4540..9084- (Sphaerotrichia firma ET2_F female)back to top |