mRNA_S-firma_F_contig1062.847.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI) HSP 1 Score: 805 bits (2078), Expect = 2.220e-270 Identity = 583/1101 (52.95%), Postives = 679/1101 (61.67%), Query Frame = 3
Query: 522 AAPLSIETIAAALESGRSQTAATATH--HPNDQRQQRGGDFMPNREVDQVRDSRDFERRGGGGGRGDGNQRQDNRD-----------WSAARRGVGGRDQKVYGE-----IVGGGXXXXXKKAKGNPNKLSLKKRRARDRAEQLPEEKQLQNEVAAALKAADAEATLRSFNTAMDREVPLRPNLLSGVLNQCAKAGLMDDCVRVVVEMKRLGIVIEENTYVPLIRGMVRNGDWQGAFGLVKDMVAQGVQPRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCGLSVAGELWENARSGKLDEKLLDMSYHARRARLLDDQVELLEGHFSAVPV----TVPVASEGXXXXXXXXXXXXXXXXXXXXSLDEERRRIAEVVRASPPLARRVKVSGGHEIDDDSWPREWSSKKPFSQRQDDNTCPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSKLTKTLAKNRQRLGVTKPGDNPYYSFTDEDQQEQLQIFVDWLHSQRADGKTYTAVIDSANVAYHKGNAFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMSNPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDDIPMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKIS-WPRNPPQVAIQPPPPFTRDVQRSDQGCWHVPAGADDEWLCIDVQRGLEMGLDKLMPASRHKRSPSKGAGASHGNGVGGSDPGDVAAGVAATAAVAGGDGPPCSAATEDEKLKQVGGLLQSMRVKKHHSKAFRYSTQGTVEEAAMAAKRAAXXXXXXXXXXXXXXXXXXFXDAQTAGGLDANSXXXXXXXXXXXXXXXXXXXXXXXXXXSEDGLVEGSFGQQRATGRQGLEQTEGDDVSGAAAVAKQAPRATALEYAARQTTPMTAAAAVVRKPVPAAXXXXXXXXXXXXXXXXAAPEVASR---GLETPRGSKAST---LNREGRQLEEEVVEVESNLPGAGGRIEHAV-EDGPGKRSEDRCEVSLEVGSGAGGQVDQEEQQQQQWASMTVAALKDELRQRGLKVSGKKAELVERLLGA 3734
AAP+SIE+IA+ LESG+SQT++ ++ +P+DQ+QQ QV F++RG G G + ++ + + R G G V +V GG +++KGNPNKLSL+KRRAR+R + PEEKQLQNEVA ALKA AE TLRSFNTAM+ V LR NLL GVLNQCAKAGLMDDC+RVV+EMK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LCGLSVAGELW+NARSGKLDEKLL+MSYHAR + QVE LE HF+AVP+ ++P+ + D I E V++S PLARRVKV+GGHEIDDDSW REWSS+KP ++ + ++CPAC G LRAVGLT GERARIRETLFGLAGLQVKKHARS+ TK LA++RQR G +NP+YSFTDEDQ+EQLQIFVDWLH+QRADGKTYTAVIDSANVAYHKG+AF+FSLPQVDLMV+ALE KGERPLV+IAEKYIDRVGDLYD+ +P +G F+YMSNPLNKAIVKRWRA SQLYECSDEASDDWYWMYA VAFDDIPMT ISNDRTRDHRMSLAETVPYLRWRTTQLAQFELT+ LKDIMGKG+ WP NPPQVAIQPPP FTRDVQ+S+QGCWHVPAGADDEWLCIDVQRGL MGLDKLMP R +H N S PG+ G A A+ G + ED+ L++VGGLLQSMRV+K HS++ XXXXXXXXXXXXXXXXXX X AQT GG+ +S + R R G+DV AAA AAA+ PVP AAP+ R + T G AS + G + V+ E++ A IE ++ EDG +R D E + E EQ +Q+W+SM V +LK+ELR RGLKVSGKKAELVERLL A
Sbjct: 107 AAPISIESIASTLESGQSQTSSARSNGNNPSDQQQQ------------QVWRDSSFDQRGRGDAAAAGLRSRNTEEPGWVGDDQEPGYDDGRNGFPGGRAGVANAARDPGVVEGGDIVGEEQSKGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTM--GQVEQLEEHFNAVPLAATPSIPINGDAGAVG------------------DTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKP-TRAERPHSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRHTKMLARSRQRQG----NENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDN-SPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYPLKDIMGKGLNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDKLMPTPRK----------THPNIHADSPPGETNDGSARDVAMVSSGGGARTGGAEDDTLRKVGGLLQSMRVRKQHSRSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTGGVSRDSPYARVL----------------------------AADAARVKDR-------GEDVGSAAA-----------------------AAAIPPAPVP------------------AAPKATPRDPDSISTTTGGAASQPPGIRHTGERGARAVLPPETSRSTAADAIEDSLKEDGAEERVSDVDETASE-----------NEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 1071
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A6H5KNL2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL2_9PHAE) HSP 1 Score: 255 bits (651), Expect = 6.160e-69 Identity = 229/474 (48.31%), Postives = 261/474 (55.06%), Query Frame = 3
Query: 522 AAPLSIETIAAALESGRSQTAATATHHPNDQRQQRGGDFMPNREVDQVRDSRDFERRGGGGGRGDGNQRQDNRDWSAARRGVGGRDQK--VYGE-------------------IVGGGXXXXXKKAKGNPNKLSLKKRRARDRAEQLPEEKQLQNEVAAALKAADAEATLRSFNTAMDREVPLRPNLLSGVLNQCAKAGLMDDCVRVVVEMKRLGIVIEENTYVPLIRGMVRNGDWQGAFGLVKDMVAQGVQPRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCGLSVAGELWENARSGKLDEKLLDMSYHARRARLLDDQVELLEGHFSAVPV----TVPVASEGXXXXXXXXXXXXXXXXXXXXSLDEERRRIAEVVRASPPLARRVKVSGGHEIDDDSWPREWSSKKPFSQRQDDNTCPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSK 1868
AAP+SIE+IA+ LE G+SQT+ QV F++RG G G R + RG GG DQ+ +G +VGGG +K+KGNPNKLSL+KRRAR + PEEKQLQNE+A ALKA AE LRSFNTAM+ V LR NLL GVLNQCAKAGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LCGLSVAGELW+NARSGKLDEKLLDMSYHAR + QVE LE HF+AVP+ ++P+ + D I E+ +S PLARRVKV+GGHEIDDDSW REWSS+KP + D+ CPAC G LRAVGLT GERARIRETLFGLAGLQVKKHARS+
Sbjct: 193 AAPISIESIASLLERGQSQTSTARXXXX----------XXXXXXXQQVWRDDSFDKRGRGDAAAAGL-----RSRNTEERGAGGADQEPGYHGGRNGFPGGRAGAANAVRDPGVVGGGDTVGEEKSKGNPNKLSLRKRRARXXXXETPEEKQLQNEIALALKADSAEEALRSFNTAMEMGVALRANLLRGVLNQCAKAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLDMSYHARNLTM--GQVEQLEEHFNAVPLAAAPSIPINGDAGAVG------------------DTNACAITEI--SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDS-CPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSR 628
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.430e-29 Identity = 135/572 (23.60%), Postives = 213/572 (37.24%), Query Frame = 3
Query: 933 AALKAADAEATLRSFNTAMDREVPLRPNLLSGVLNQCAKAGLMDDCVRVVVEMKRLGIVIEENTYVPLIRGMVRNGDWQGAFGLVKDMVAQGVQPRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCGLSVAGELWENARSGKLDEKLLDMSYHARRARLLDDQVELLEGHFSAVPVTVPVASEGXXXXXXXXXXXXXXXXXXXXSLDEERRRIAEVVRASPPLARRVKVSGGHEIDDDSWPREWSSKKPFSQRQDDNTCPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSKLTKTLAKNRQRLGVTKPGDNPYYSFTDEDQQEQLQIFVDWLHSQRADGKTYTAVIDSANVAYHKGN--AFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMS------NPLNKAIVKRWRANSQLYE-------------------CSDEASDDWYWMYAAVAFDDI--PMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQ 2561
A LKAAD + + + R + + +GV+N C + + +++ M+ G + +EN+Y L+R G + XXXX L G S++G+LW +G++D L ++SY L D +E L+ F+A L E P+A V V G + +CPAC L+A+GLT ER ++R L +A + + +K + + L F WL + +TAV+D+ NVAYH N F + QVD +V+ LE +GER LVV E+Y+ + P F + +P AI++ W LY C++ +DDWYWMY VAFD++ P+T +SND RDHR++L E P++RW+ TQ ++ + + +++ + PPPFTRD+Q
Sbjct: 39 ATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEV--FELDGDLIEQLQQAFNA-------------------------------GLQE-------------PVASMVSVESGGK----------------------GSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXA---------DTLLNFAQWLRERAK----FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAI-------IPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFPRVALEGSTESLEVD---------LFDPPPFTRDIQ 513
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A7R9U7R6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R6_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.000e-23 Identity = 82/299 (27.42%), Postives = 131/299 (43.81%), Query Frame = 3
Query: 1749 CPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSKLTKTLAKNRQRLGVTKPGDNPYYSFTDEDQQEQLQIFVDWLHSQRADGKTYTAVIDSANVAYHKGNAFY--FSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMS-NPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDDIPMT----AISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRSDQGCWHVPAGADDEWLCID 2624
CPAC V L++ +RA +R + LA + +S + F WL + +G + ++D AN+AY K N FS+ Q+ L+ LE G + LV++ +KY V + F+ + + + +++ W+ +QLY DD+ WM A VA + M +SND R+HR L + +LRWR TQ+ FEL+H +++ P+V I PPPF+R++QR++ G WH+P A L D
Sbjct: 29 CPACTREASQVSLSTKDRAALRSAILKLAAASGPSNLQS----------------------------------VASFSRWLRRKAREGHHFDYILDGANIAYTKQNYAEGRFSVVQIALVKHHLEQLGAKVLVLLPQKYCGSVVPNHIRRKGKDRKFEMVELDEDEQQLLQAWQETNQLYSVETGVHDDYLWMLATVANEQDRMQNLTRVVSNDLMRNHRKWLLNSRDFLRWRFTQVVHFELSHGIEEYAPL----------PEVVIFEPPPFSREIQRTEHG-WHIPLCAAASSLAQD 282
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A7S3XLJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ8_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 8.650e-19 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 3
Query: 2112 LELKGERPLVVIAEKYIDRVGDLYDDVTP------GQGSFKYMSNPLN---KAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDDIP------------MTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVA-IQPPPPFTRDVQRSDQGCWHVPAGADDE 2609
+E G R LVVI E+Y+DR + + T G F + S P+ + I+ +W A +Y + +DDWYWMYA V D + ++ND+ RDHR+SL P+ RWR+TQ+ F++ +DI P VA + PP F+R+VQ +D G WHVP ++
Sbjct: 1 MESMGHRVLVVIPERYMDR--EKIPNTTRIKKSNRASGKFYHPSEPVTDEQREIMDKWTAQGDIYTVAKHNNDDWYWMYATVVNRDGQAEEEEEDKEGHRLMVVTNDKMRDHRLSLLTPRPFFRWRSTQIMNFDIRKE-QDI------------PYLVATVLDPPVFSREVQMTDNGVWHVPIAEKED 173
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A1Z5J5P3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5P3_FISSO) HSP 1 Score: 100 bits (249), Expect = 7.660e-18 Identity = 94/321 (29.28%), Postives = 147/321 (45.79%), Query Frame = 3
Query: 1749 CPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSKLTKTLAKNRQRLGVTKPGDNPYYSFTDEDQQEQLQIFVDWLHSQRADGKTYTAVIDSANVAYH-KGNAFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMSNPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDD------------IPMTA-----ISNDRTRDHRMSLAETVPYLRWRTTQLAQFEL-THALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRS-----DQGCWHVPAG--ADDEWLCIDVQR 2633
CPA LR + LT +R ++ +TL +AG Q +++ AK + R + N Y+ QEQL+ F DWL + YTA++D NVAY GN Y QV +V+ L+ GERPLVV+ +KY+ R L G G + + N ++AI+ + + +Y DD+YWM A+VA P+T I+ND+ RDHR++L E + RW + + + L T KD G G ++ + P F+ ++Q + D WH P ++ E C +++
Sbjct: 348 CPATGVTLRLMALTPSQRQQVHDTLLEMAGTQHEEYG--------AKLQARGKAMEEKRNGQYA------QEQLRQFSDWLKQRET---PYTAIVDGPNVAYFGHGNVHY---SQVWEVVQELQRLGERPLVVMPQKYLSRSFWL-----SGLGKVQEL-NDQDQAIIDKLK--DCMYVVPSTCLDDYYWMLASVAEQGSTDFVIVQQDQMFPLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKD--GNGKAVNGEECSYETKFFPAQVFSGEIQGNGIQGTDTMVWHFPVSGWSESERFCFCLRQ 638
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A7S1MU78_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MU78_HEMAN) HSP 1 Score: 90.5 bits (223), Expect = 1.010e-17 Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 3
Query: 2295 ASDDWYWMYAAVAFDDIPMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRS--DQGC-WHVPAG 2597
A+DDWYWM A+V D + +SND+ RDHR++L E P++RW+TTQ+ +F+L+HA + ++ P +A+ PPP F+ ++QR+ D+G WH+P G
Sbjct: 17 ANDDWYWMLASVLPCDPQIKVVSNDQMRDHRLALLEPRPFMRWKTTQILRFDLSHAYEPAKISSGELETP----DIALIPPPRFSSELQRTVTDEGVVWHIPIG 116
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A1Z5KPE3_FISSO (Ribonuclease P n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPE3_FISSO) HSP 1 Score: 97.8 bits (242), Expect = 5.290e-17 Identity = 91/317 (28.71%), Postives = 143/317 (45.11%), Query Frame = 3
Query: 1749 CPACAGRLRAVGLTSGERARIRETLFGLAGLQVKKHARSKLTKTLAKNRQRLGVTKPGDNPYYSFTDEDQQEQLQIFVDWLHSQRADGKTYTAVIDSANVAYH-KGNAFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMSNPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVA-----------------FDDIPMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFEL-THALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRS-----DQGCWHVPAG--ADDEWLCI 2621
CPA LR + LT +R ++ +TL +AG Q +++ + A +R G F QEQL+ F DWL + +YTA++D NVAY GN Y QV +V+ L+ GERPLVV+ +KY+ R L G G + +S+ ++AI+ + + +Y DD+YWM A+VA + I+ND+ RDHR++L E + RW + + + L T KD G G ++ + P F+ ++Q + D WH P ++ E C+
Sbjct: 345 CPATGVTLRLMALTPPQRQQVHDTLLEMAGTQHEEYGAKLQARGKAMEEKRNG----------QFA----QEQLRQFSDWLKQRET---SYTAIVDGPNVAYFGHGNVHY---SQVWEVVQELQRLGERPLVVMPQKYLSRSFWL-----SGLGKVQELSDQ-DQAIIDKLK--DCMYVVQSTCLDDYYWMIASVADQGSTDFATLQKDQTFQLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYMLRTCEEKD--GDGKAVNGEECSYETKFFPAQLFSGEIQGNGLQGTDTIVWHFPVSGWSESERFCV 631
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A6V7Q716_ANACO (PRORP domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q716_ANACO) HSP 1 Score: 88.6 bits (218), Expect = 1.270e-15 Identity = 62/221 (28.05%), Postives = 97/221 (43.89%), Query Frame = 3
Query: 1977 FVDWLHSQRADGKTYTAVIDSANVA-YHKGNAFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMSNPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDDIPMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRSDQGCWHVPAGADDE------WLC 2618
F +WL + AVID+ANV Y++ N F L V +R + + PL+V+ + + P P NK +++ WR LY ++DDWYW+YAAV+ + +T ND RDH L T + RW+ +++++ R P A PPP++R +Q S+ G WH+P D+ W+C
Sbjct: 47 FQEWLER----NGPFDAVIDAANVGLYNQKNFSLFQLNSVVNGMRQMSRSNKLPLIVLHSRRVKS--------GPADA-------PNNKKLIESWRRAGTLYATPPGSNDDWYWLYAAVSCRSLVVT---NDEMRDHLFQLLGTSFFPRWKEKHQ----------------VRLTFSRRGP--AFHMPPPYSRVIQESEGGSWHIPTLTGDDIEAPRQWIC 227
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Match: A0A199W6X3_ANACO (Ribonuclease P n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199W6X3_ANACO) HSP 1 Score: 89.7 bits (221), Expect = 1.570e-14 Identity = 63/221 (28.51%), Postives = 99/221 (44.80%), Query Frame = 3
Query: 1977 FVDWLHSQRADGKTYTAVIDSANVA-YHKGNAFYFSLPQVDLMVRALELKGERPLVVIAEKYIDRVGDLYDDVTPGQGSFKYMSNPLNKAIVKRWRANSQLYECSDEASDDWYWMYAAVAFDDIPMTAISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTHALKDIMGKGMKISWPRNPPQVAIQPPPPFTRDVQRSDQGCWHVPAGADDE------WLC 2618
F +WL + AVID+ANV Y++ N +F L V +R + + PL+V+ + + G D P NK +++ WR LY ++DDWYW+YAAV+ + +T ND RDH L T + RW+ +++++ R P A PPP++R +Q S+ G WH+P D+ W+C
Sbjct: 387 FQEWLER----NGPFDAVIDAANVGLYNQKNFSFFQLNSVVNGMRQMSRSNKLPLIVLHSRRVK--GGPADA-------------PNNKKLIESWRRAGVLYATPPGSNDDWYWLYAAVSCRSLVVT---NDEMRDHLFQLLGTSFFPRWKEKHQ----------------VRLTFSRRGP--AFHMPPPYSRVIQESEGGSWHIPTLTGDDIEAPRQWIC 567 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1062.847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1062.847.1 >prot_S-firma_F_contig1062.847.1 ID=prot_S-firma_F_contig1062.847.1|Name=mRNA_S-firma_F_contig1062.847.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1232bp MGTSWPYLRPGYPSTTESTRRPLAQEGHGESDRASAARRSELTQPIVGRTback to top mRNA from alignment at S-firma_F_contig1062:8068..22374+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1062.847.1 ID=mRNA_S-firma_F_contig1062.847.1|Name=mRNA_S-firma_F_contig1062.847.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=14307bp|location=Sequence derived from alignment at S-firma_F_contig1062:8068..22374+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1062:8068..22374+ >mRNA_S-firma_F_contig1062.847.1 ID=mRNA_S-firma_F_contig1062.847.1|Name=mRNA_S-firma_F_contig1062.847.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=7392bp|location=Sequence derived from alignment at S-firma_F_contig1062:8068..22374+ (Sphaerotrichia firma ET2_F female)back to top |